| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tauD [H]
Identifier: 146341218
GI number: 146341218
Start: 4491925
End: 4492863
Strand: Reverse
Name: tauD [H]
Synonym: BRADO4292
Alternate gene names: 146341218
Gene position: 4492863-4491925 (Counterclockwise)
Preceding gene: 146341219
Following gene: 146341216
Centisome position: 60.25
GC content: 65.07
Gene sequence:
>939_bases ATGAGCTTCTATAGGGACTTCAACGACAAGCTCGCCATCCAGGCCTGGAACGGCCGGAAGCGCGAACCTTATGAGACGAT CGAGGTCAGGCAACTCGGTCCGACCGTCGGCGCGGAGATCGGCGGGGTCGATCTTGCAAAGGATGTCTCCGAGGCGCAGT TCGCGGAGATCCACCGCGCGCTGGACGAAAACCTGGCGATCGTGTTCCGCGATCAGGACATCTCCAAGGAGGACCACAAG CGGTTCGCGCGGCGCTTCGGCAAGTCGCTGCACCGGCACGAGCTGGCGGCGACGCGTTTCCGTCATGATGGGCCGTTCGA TCCGGAATTCCTGTCGTGGAAGACCGACGCCAATTCGCGCTTCACGGCCGGCGACGGCTGGCACCCTGATGTGTCCTGCG ACCCGAGCCCGATCGCGGTCTCGCTGCTGCGGGTGACGAAGACCCCGCCGCTCGGCGGCGACACGGCGTTTGCCAACATG TATCTCGCCTATGAATTCCTGTCGGATCCGATCAAGCAGCTGCTCGACGGCTTGACCGCGATCCATGACGGATCATTGGC GTGGACGGCCGGCTATGGCGCCAAGCCCGACCCGGGGAAGACCTATCCGCAATCCGAGCATCCGGTGGTCGTGACCCATC CGCGCACCGGCCGCAAATTCCTTTACGTCAACGCGTCCTTCACGTCGCACATCGTGCAGCTGACGCGGCGGGAGAGCGAC GCGCTGCTGCAGCTCCTGTTCCGCCATGTCGAAAGCCAGCTCGCGCTGCAGACGCGCGTGCAGTGGCGGCCCAACTCGCT GCTCGTCTGGGACAATTGGGCGAGCCAGCACCATGCGGTGTGGGACTACTATCCCGAGGAGCGCTGGGGCGAGCGGGTGT CCGTGGTGACCGGCGAGGTGCCGCAAGCGCGGCTCGATTTCAGCGAGGCCGCGGAGTAG
Upstream 100 bases:
>100_bases CGCCGAACGCGCCGCTCGTGCGCTCGTGATCAGCGGTCGCGGACATCTGCGCCGCCGCGGCTCCCTTTAACACTTCCATC GCCATCGAAGGACATCACTC
Downstream 100 bases:
>100_bases GGCGCTTGTGCCGCGGCGGGCACGAGCTCTCCGCGGCGTCAGCCCGGGCCGAGATGAACCAGGAGCAGGCGGGAGATCGC CTCGCAGGCCAGCTCGTCGG
Product: putative alpha-ketoglutarate-dependent taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSFYRDFNDKLAIQAWNGRKREPYETIEVRQLGPTVGAEIGGVDLAKDVSEAQFAEIHRALDENLAIVFRDQDISKEDHK RFARRFGKSLHRHELAATRFRHDGPFDPEFLSWKTDANSRFTAGDGWHPDVSCDPSPIAVSLLRVTKTPPLGGDTAFANM YLAYEFLSDPIKQLLDGLTAIHDGSLAWTAGYGAKPDPGKTYPQSEHPVVVTHPRTGRKFLYVNASFTSHIVQLTRRESD ALLQLLFRHVESQLALQTRVQWRPNSLLVWDNWASQHHAVWDYYPEERWGERVSVVTGEVPQARLDFSEAAE
Sequences:
>Translated_312_residues MSFYRDFNDKLAIQAWNGRKREPYETIEVRQLGPTVGAEIGGVDLAKDVSEAQFAEIHRALDENLAIVFRDQDISKEDHK RFARRFGKSLHRHELAATRFRHDGPFDPEFLSWKTDANSRFTAGDGWHPDVSCDPSPIAVSLLRVTKTPPLGGDTAFANM YLAYEFLSDPIKQLLDGLTAIHDGSLAWTAGYGAKPDPGKTYPQSEHPVVVTHPRTGRKFLYVNASFTSHIVQLTRRESD ALLQLLFRHVESQLALQTRVQWRPNSLLVWDNWASQHHAVWDYYPEERWGERVSVVTGEVPQARLDFSEAAE >Mature_311_residues SFYRDFNDKLAIQAWNGRKREPYETIEVRQLGPTVGAEIGGVDLAKDVSEAQFAEIHRALDENLAIVFRDQDISKEDHKR FARRFGKSLHRHELAATRFRHDGPFDPEFLSWKTDANSRFTAGDGWHPDVSCDPSPIAVSLLRVTKTPPLGGDTAFANMY LAYEFLSDPIKQLLDGLTAIHDGSLAWTAGYGAKPDPGKTYPQSEHPVVVTHPRTGRKFLYVNASFTSHIVQLTRRESDA LLQLLFRHVESQLALQTRVQWRPNSLLVWDNWASQHHAVWDYYPEERWGERVSVVTGEVPQARLDFSEAAE
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=285, Percent_Identity=35.0877192982456, Blast_Score=161, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6322971, Length=276, Percent_Identity=34.0579710144928, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 35496; Mature: 35365
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYRDFNDKLAIQAWNGRKREPYETIEVRQLGPTVGAEIGGVDLAKDVSEAQFAEIHRA CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHH LDENLAIVFRDQDISKEDHKRFARRFGKSLHRHELAATRFRHDGPFDPEFLSWKTDANSR HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCE FTAGDGWHPDVSCDPSPIAVSLLRVTKTPPLGGDTAFANMYLAYEFLSDPIKQLLDGLTA ECCCCCCCCCCCCCCCHHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHDGSLAWTAGYGAKPDPGKTYPQSEHPVVVTHPRTGRKFLYVNASFTSHIVQLTRRESD HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHCCHH ALLQLLFRHVESQLALQTRVQWRPNSLLVWDNWASQHHAVWDYYPEERWGERVSVVTGEV HHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCEECCCCHHHHCCEEEEEECCC PQARLDFSEAAE CCHHCCHHHHCC >Mature Secondary Structure SFYRDFNDKLAIQAWNGRKREPYETIEVRQLGPTVGAEIGGVDLAKDVSEAQFAEIHRA CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHH LDENLAIVFRDQDISKEDHKRFARRFGKSLHRHELAATRFRHDGPFDPEFLSWKTDANSR HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCE FTAGDGWHPDVSCDPSPIAVSLLRVTKTPPLGGDTAFANMYLAYEFLSDPIKQLLDGLTA ECCCCCCCCCCCCCCCHHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IHDGSLAWTAGYGAKPDPGKTYPQSEHPVVVTHPRTGRKFLYVNASFTSHIVQLTRRESD HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHCCHH ALLQLLFRHVESQLALQTRVQWRPNSLLVWDNWASQHHAVWDYYPEERWGERVSVVTGEV HHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCEECCCCHHHHCCEEEEEECCC PQARLDFSEAAE CCHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]