| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is nfrA1 [H]
Identifier: 146341205
GI number: 146341205
Start: 4480544
End: 4481398
Strand: Reverse
Name: nfrA1 [H]
Synonym: BRADO4279
Alternate gene names: 146341205
Gene position: 4481398-4480544 (Counterclockwise)
Preceding gene: 146341206
Following gene: 146341202
Centisome position: 60.1
GC content: 69.36
Gene sequence:
>855_bases ATGACGATCATCGAAACGAGGGCACCGACCACTCCAAGCCACGACATCACGGCGGCGCTGCGCAAGCGCTACGGCACTGA CATCCCCGCCGTAGCGGCCGGCGCCGATGACATCCTCGGCCATCTCCTGGCGCACCGCTCGATCCGCAGCTACCGCCCCG ATCCGGTGCCGCCGCACACCGTGGAAACGCTGGTGGCCGCGGCGCAGTCGGCGGCGTCGTCGTCGAACCTGCAGACCTGG AGCGTCGTCGCGGTCGAGGACCCCGCGCGCAAGCAGCGCCTGTCGGAATTCGTGGGCAATCAGAAGCACGTCCGCGAGGC ACCGCTTTTCCTGGTCTGGCTCGCCGATCTGTCGCGCGCCGAGCGGCTGGCGCGGCGGGAAGGGCGCCCCGATGACGGCA TCCATTTCCTGGAGACGCTGTTCGTCGCGATCATCGACGCAGCGCTCGCTGCGCAGAATGCCGTCGTCGCGCTCGAGGCG CTCGGCCTCGGCTCGGTCTATATCGGCGCGATCCGCAACCGGCCGCAGGCGGTGGCTGAGGAGCTCGGCCTGCCGCCGAA CGTGCTCGCCGTGTTCGGCCTCTGCGTCGGCTATGCCGATCTCGCGGCCGGCGAGGACGTCAAACCGCGCCTGCGCCAGA GCGTGGTTCTGCATCGCGAGCGCTATGCGCCGACCGATGAGATCCACGGCATCGCCGCCTATGACGAGACTTTGCGCGCG TTCCAGACCAGCCAGGGCGTGGCGCCGGTCGGCTGGCGGGACACGGTGCTCAACCGGCTCGGCTCGGCGAAGGCGCTCAA TGGCCGCGACAAACTGGCTGAGGCGCTGCGCGCGCTCGGCTTCGGATTGAAGTAA
Upstream 100 bases:
>100_bases TTGCCGTTGTCCTCGGGGTCGGCTTTGCTAGGCGGCGACGCGCACGCACTTATCGAATATCGGCCGTCACAATGACGTAC GGGCCGGCATGGGGACAGGA
Downstream 100 bases:
>100_bases CTGCGGACCCGGAGAGATTCGCGGCGACCCGGGACGGACCGCCGCGATGGCTCACTTCATGTAGTCGGGCAGGGTGAAGC CGTCATAGAAGCGATCCGCG
Product: putative nitroreductase family protein oxygen-insensitive NADPH nitroreductase (NfsA-like)
Products: NA
Alternate protein names: NADPH-dependent FMN reductase; NADPH-dependent nitroreductase; NADPH-dependent oxidoreductase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTIIETRAPTTPSHDITAALRKRYGTDIPAVAAGADDILGHLLAHRSIRSYRPDPVPPHTVETLVAAAQSAASSSNLQTW SVVAVEDPARKQRLSEFVGNQKHVREAPLFLVWLADLSRAERLARREGRPDDGIHFLETLFVAIIDAALAAQNAVVALEA LGLGSVYIGAIRNRPQAVAEELGLPPNVLAVFGLCVGYADLAAGEDVKPRLRQSVVLHRERYAPTDEIHGIAAYDETLRA FQTSQGVAPVGWRDTVLNRLGSAKALNGRDKLAEALRALGFGLK
Sequences:
>Translated_284_residues MTIIETRAPTTPSHDITAALRKRYGTDIPAVAAGADDILGHLLAHRSIRSYRPDPVPPHTVETLVAAAQSAASSSNLQTW SVVAVEDPARKQRLSEFVGNQKHVREAPLFLVWLADLSRAERLARREGRPDDGIHFLETLFVAIIDAALAAQNAVVALEA LGLGSVYIGAIRNRPQAVAEELGLPPNVLAVFGLCVGYADLAAGEDVKPRLRQSVVLHRERYAPTDEIHGIAAYDETLRA FQTSQGVAPVGWRDTVLNRLGSAKALNGRDKLAEALRALGFGLK >Mature_283_residues TIIETRAPTTPSHDITAALRKRYGTDIPAVAAGADDILGHLLAHRSIRSYRPDPVPPHTVETLVAAAQSAASSSNLQTWS VVAVEDPARKQRLSEFVGNQKHVREAPLFLVWLADLSRAERLARREGRPDDGIHFLETLFVAIIDAALAAQNAVVALEAL GLGSVYIGAIRNRPQAVAEELGLPPNVLAVFGLCVGYADLAAGEDVKPRLRQSVVLHRERYAPTDEIHGIAAYDETLRAF QTSQGVAPVGWRDTVLNRLGSAKALNGRDKLAEALRALGFGLK
Specific function: Reduces FMNH(2) to FMN, with NADPH as reductant. It also reduces nitroaromatic compounds, quinones and azo dyes [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=205, Percent_Identity=38.5365853658537, Blast_Score=136, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 30620; Mature: 30489
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIETRAPTTPSHDITAALRKRYGTDIPAVAAGADDILGHLLAHRSIRSYRPDPVPPHT CCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH VETLVAAAQSAASSSNLQTWSVVAVEDPARKQRLSEFVGNQKHVREAPLFLVWLADLSRA HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH ERLARREGRPDDGIHFLETLFVAIIDAALAAQNAVVALEALGLGSVYIGAIRNRPQAVAE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH ELGLPPNVLAVFGLCVGYADLAAGEDVKPRLRQSVVLHRERYAPTDEIHGIAAYDETLRA HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH FQTSQGVAPVGWRDTVLNRLGSAKALNGRDKLAEALRALGFGLK HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TIIETRAPTTPSHDITAALRKRYGTDIPAVAAGADDILGHLLAHRSIRSYRPDPVPPHT CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH VETLVAAAQSAASSSNLQTWSVVAVEDPARKQRLSEFVGNQKHVREAPLFLVWLADLSRA HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH ERLARREGRPDDGIHFLETLFVAIIDAALAAQNAVVALEALGLGSVYIGAIRNRPQAVAE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH ELGLPPNVLAVFGLCVGYADLAAGEDVKPRLRQSVVLHRERYAPTDEIHGIAAYDETLRA HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH FQTSQGVAPVGWRDTVLNRLGSAKALNGRDKLAEALRALGFGLK HHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 9836433 [H]