Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is srpH [H]
Identifier: 146341201
GI number: 146341201
Start: 4476797
End: 4477756
Strand: Direct
Name: srpH [H]
Synonym: BRADO4275
Alternate gene names: 146341201
Gene position: 4476797-4477756 (Clockwise)
Preceding gene: 146341200
Following gene: 146341203
Centisome position: 60.04
GC content: 66.67
Gene sequence:
>960_bases ATGAGACATCGTCCTGTGACGGGCTCCGGCGCGGAGACGCCTGCACCGGCGGGCGAACGCTGGGGCCTCGATCGGCTGGT GGCGGAGCTGCGCGTCTCGCGCGAGGAAACCCATAGCATCCGCAAGGACGGCACGATCCACCGGCCGCCATCGCGCGAGA AGCTGGCGCAGGTCGTCGCCGCGCTGACCGAGGCGCTGTTTCCGCGCCACTATGGCCAGTACGACCTCGATAGCGAGAAT ATCGACTATTTCGTCGGCCACCGGCTCAGCATCGGCCTCGACCTGCTCTCCGACCAGATCCACCGCGCCGCCTTGTTCGT CGGCGACGAGCTGATCCCCGGCTTTCGCCAGCCGGACGCCGTCGAGCTCACGCACAGTTTCGCAAAGGGGTTGCCTGGGC TGCGCGGAATCCTGATCAGCGACCTGCGCGCCGCCTTCGTCGGTGATCCCGCCGCCAAGAGCTTTCCGGAGATCCTGATC GGCTATCCCGGCATGACCGCGATCATTCACCACCGGCTCGCGCATCTGCTCTACGGTCACGGCGCGCGCCTGGTGTCGCG GCTGATTGCCGAGATCGCGCACGCCCGAACCGGGATCGACATTCATCCGGGCGCGCAGATCGGTTCGGGCTTCTTCATCG ATCACGGCACCGGCGTCGTCATCGGCGAGACGGCCGTGATCGGCGACAATGTTCGGATCTACCAGGCGGTCACGCTCGGC GCGCGGCACTTCCCGACCGAGGAGGACGGCACGCTGATCAAGGGCGACGCGCGCCATCCGATCGTCGAGGACGACGTCGT GATCTATGCCGGCGCCACCATCCTCGGCCGCATCACGATCGGACAGGGATCGACGATCGGCGGCAATGTCTGGCTGACAC ACGATGTCCCGCCCAACAGCATCGTGACCCAGGCCACGCTCCGCAACAAGGTCGGCGGACCGAACCTGCAGAAGTCCTGA
Upstream 100 bases:
>100_bases ATATGTCGAGGTCGACCGCAATGCCGATCTCGACCTGCTGGCAGAAGTCGGCGTGCCGCCGGCGCATGTGCGGTGACAGC GCACCTTTGGGGGAGACGGC
Downstream 100 bases:
>100_bases GCCGTCGTGGGATCTGCCGGAGACCCGCGGTCGAAATGGAGATCCACGCTTGCTGATCAGCCCGACAAATTCATGCTCGT GCCGCGGACAACAATGCAAA
Product: serine acetyltransferase (cysE-like)
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRHRPVTGSGAETPAPAGERWGLDRLVAELRVSREETHSIRKDGTIHRPPSREKLAQVVAALTEALFPRHYGQYDLDSEN IDYFVGHRLSIGLDLLSDQIHRAALFVGDELIPGFRQPDAVELTHSFAKGLPGLRGILISDLRAAFVGDPAAKSFPEILI GYPGMTAIIHHRLAHLLYGHGARLVSRLIAEIAHARTGIDIHPGAQIGSGFFIDHGTGVVIGETAVIGDNVRIYQAVTLG ARHFPTEEDGTLIKGDARHPIVEDDVVIYAGATILGRITIGQGSTIGGNVWLTHDVPPNSIVTQATLRNKVGGPNLQKS
Sequences:
>Translated_319_residues MRHRPVTGSGAETPAPAGERWGLDRLVAELRVSREETHSIRKDGTIHRPPSREKLAQVVAALTEALFPRHYGQYDLDSEN IDYFVGHRLSIGLDLLSDQIHRAALFVGDELIPGFRQPDAVELTHSFAKGLPGLRGILISDLRAAFVGDPAAKSFPEILI GYPGMTAIIHHRLAHLLYGHGARLVSRLIAEIAHARTGIDIHPGAQIGSGFFIDHGTGVVIGETAVIGDNVRIYQAVTLG ARHFPTEEDGTLIKGDARHPIVEDDVVIYAGATILGRITIGQGSTIGGNVWLTHDVPPNSIVTQATLRNKVGGPNLQKS >Mature_319_residues MRHRPVTGSGAETPAPAGERWGLDRLVAELRVSREETHSIRKDGTIHRPPSREKLAQVVAALTEALFPRHYGQYDLDSEN IDYFVGHRLSIGLDLLSDQIHRAALFVGDELIPGFRQPDAVELTHSFAKGLPGLRGILISDLRAAFVGDPAAKSFPEILI GYPGMTAIIHHRLAHLLYGHGARLVSRLIAEIAHARTGIDIHPGAQIGSGFFIDHGTGVVIGETAVIGDNVRIYQAVTLG ARHFPTEEDGTLIKGDARHPIVEDDVVIYAGATILGRITIGQGSTIGGNVWLTHDVPPNSIVTQATLRNKVGGPNLQKS
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=179, Percent_Identity=36.8715083798883, Blast_Score=109, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 34411; Mature: 34411
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRPVTGSGAETPAPAGERWGLDRLVAELRVSREETHSIRKDGTIHRPPSREKLAQVVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ALTEALFPRHYGQYDLDSENIDYFVGHRLSIGLDLLSDQIHRAALFVGDELIPGFRQPDA HHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCH VELTHSFAKGLPGLRGILISDLRAAFVGDPAAKSFPEILIGYPGMTAIIHHRLAHLLYGH HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCHHEECCCCHHHHHHHHHHHHHHCC GARLVSRLIAEIAHARTGIDIHPGAQIGSGFFIDHGTGVVIGETAVIGDNVRIYQAVTLG HHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCEEEEECEEEECCCEEEEEEEECC ARHFPTEEDGTLIKGDARHPIVEDDVVIYAGATILGRITIGQGSTIGGNVWLTHDVPPNS CCCCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCEEEECCCCCCH IVTQATLRNKVGGPNLQKS HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRHRPVTGSGAETPAPAGERWGLDRLVAELRVSREETHSIRKDGTIHRPPSREKLAQVVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ALTEALFPRHYGQYDLDSENIDYFVGHRLSIGLDLLSDQIHRAALFVGDELIPGFRQPDA HHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCH VELTHSFAKGLPGLRGILISDLRAAFVGDPAAKSFPEILIGYPGMTAIIHHRLAHLLYGH HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCHHEECCCCHHHHHHHHHHHHHHCC GARLVSRLIAEIAHARTGIDIHPGAQIGSGFFIDHGTGVVIGETAVIGDNVRIYQAVTLG HHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCEEEEECEEEECCCEEEEEEEECC ARHFPTEEDGTLIKGDARHPIVEDDVVIYAGATILGRITIGQGSTIGGNVWLTHDVPPNS CCCCCCCCCCCEEECCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCEEEECCCCCCH IVTQATLRNKVGGPNLQKS HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]