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The map label for this gene is soxC [H]

Identifier: 146341199

GI number: 146341199

Start: 4474941

End: 4476170

Strand: Direct

Name: soxC [H]

Synonym: BRADO4273

Alternate gene names: 146341199

Gene position: 4474941-4476170 (Clockwise)

Preceding gene: 146341198

Following gene: 146341200

Centisome position: 60.01

GC content: 66.67

Gene sequence:

>1230_bases
ATGAACAAGCCGCTCTCCAGCAAGACACTCACCACCGAAACACCATTGCCGTTGGCCTCGGAGGCCCTCGATCAGTTGCT
GGCGGCCATCGCCGATGGCGAATCGGAGCGTGAGCGCGAGCGGATCCTGCCACATCAGCAGATCGCGCTGATCAAACAGG
CCCGGCTCGGTGCGCTGCGCCTGCCCGTCGCCGCAGGCGGCTCAGGCAGCACGATCCGCCAGCTGTTCGAAATGGTGATC
CGGCTCGCCGAGGCCGACGCCAATGTCGCCCATATCCTGCGCAACCATTTCAGCGTGGTCGAACGGCTCGTGCGTATTCC
CCGCGATGATCAGGCGCGGGCGTGGCAGCAGCGCGTCGCAGCCGGCGCGATCATCGGCCTCGCCACCACCGAGCTCGACA
GCCCGCAGGTCGGCAACATCACGCCGAACACGACCTTCACGCCGGATGGCGATGACTACCTGCTGAACGGAACCAAGTAC
TACAGCACCGGCACGCTCTATTCCGACCTCGTCCTGGTACGCGCGGCTGATCCCACCGGGCGTCCCGGCGCGACCATCCT
GCCGCTCGATCGCGCCGGCATCGAGCTGGTCGACGACTGGGACGGCATGGGCCAGCGGCTGACCGCAACCGGCACCACCC
ATTTTCGCAACGTCCGGGTCAAGCGGCAGGAGATCGTGTTCGACGCGCCTGATATCGGCTATGGCGTGCCCTACTCCAAC
ACGTTCGCGCAGCTGTTCTTGACCGCGGCCGTGGCCGGCATCAGCCGCGCCGCATTGCGCGATGCCATTGCGCTGGTGCG
CTCGCGCAAGCGCACCTTCTACTACGCGCCGCACGAGAAGCCGACCGAGGACCCGCTGCTGCAGCAGACCGTCGGCCAGA
TCGCCGCGTCCGCGCACGCCGCCGAAACAGTCGTGCTCGTCGCCGCCGAGGCACTCGACGCCGCCACCGAGGCGTTCGAT
GCCGGACGCGACGATGCCGAAGCACTGGCCCATCGGGCCGCGCTGCTGTCGGCGCAAGCCAAGATCGTCGCCGACGACGC
CGCCATCCGCAATGGCGGGCTGATCTTCGACGTCGGCGGCGCGTCGTCGACCAAGAAGGCCACCAATTTCGACCGGCACT
GGCGCAATGCGCGCACGCTGTCGTCGCATAATCCGGTCACCTATAAGCAGCGGGCGATCGGACAATATCTGATCAACGGC
ACGCCGCTCCCGGCCAAGGGATTTTTCTGA

Upstream 100 bases:

>100_bases
CCCGAGCCGGTCAAGGTCGCCGATCACCTCGCTTCGATCGAGGACACGGTGCCGCAGCGTTGAGCCGTCTTCCCTCTCCT
TTCAACTGTTCCGGTCCGTC

Downstream 100 bases:

>100_bases
CCGGACCACGGATTGCCTGCCGAAGGAGGCGACGAATGAGCAAGCATGGACTCCATCTGCTGACTGCGTCCACTCCCCTG
CACTTCTCCTCGGCGCTCCG

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNKPLSSKTLTTETPLPLASEALDQLLAAIADGESERERERILPHQQIALIKQARLGALRLPVAAGGSGSTIRQLFEMVI
RLAEADANVAHILRNHFSVVERLVRIPRDDQARAWQQRVAAGAIIGLATTELDSPQVGNITPNTTFTPDGDDYLLNGTKY
YSTGTLYSDLVLVRAADPTGRPGATILPLDRAGIELVDDWDGMGQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSN
TFAQLFLTAAVAGISRAALRDAIALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHAAETVVLVAAEALDAATEAFD
AGRDDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGGASSTKKATNFDRHWRNARTLSSHNPVTYKQRAIGQYLING
TPLPAKGFF

Sequences:

>Translated_409_residues
MNKPLSSKTLTTETPLPLASEALDQLLAAIADGESERERERILPHQQIALIKQARLGALRLPVAAGGSGSTIRQLFEMVI
RLAEADANVAHILRNHFSVVERLVRIPRDDQARAWQQRVAAGAIIGLATTELDSPQVGNITPNTTFTPDGDDYLLNGTKY
YSTGTLYSDLVLVRAADPTGRPGATILPLDRAGIELVDDWDGMGQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSN
TFAQLFLTAAVAGISRAALRDAIALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHAAETVVLVAAEALDAATEAFD
AGRDDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGGASSTKKATNFDRHWRNARTLSSHNPVTYKQRAIGQYLING
TPLPAKGFF
>Mature_409_residues
MNKPLSSKTLTTETPLPLASEALDQLLAAIADGESERERERILPHQQIALIKQARLGALRLPVAAGGSGSTIRQLFEMVI
RLAEADANVAHILRNHFSVVERLVRIPRDDQARAWQQRVAAGAIIGLATTELDSPQVGNITPNTTFTPDGDDYLLNGTKY
YSTGTLYSDLVLVRAADPTGRPGATILPLDRAGIELVDDWDGMGQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSN
TFAQLFLTAAVAGISRAALRDAIALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHAAETVVLVAAEALDAATEAFD
AGRDDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGGASSTKKATNFDRHWRNARTLSSHNPVTYKQRAIGQYLING
TPLPAKGFF

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=23.0769230769231, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508101, Length=262, Percent_Identity=23.6641221374046, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44135; Mature: 44135

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPLSSKTLTTETPLPLASEALDQLLAAIADGESERERERILPHQQIALIKQARLGALR
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCEEE
LPVAAGGSGSTIRQLFEMVIRLAEADANVAHILRNHFSVVERLVRIPRDDQARAWQQRVA
CCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AGAIIGLATTELDSPQVGNITPNTTFTPDGDDYLLNGTKYYSTGTLYSDLVLVRAADPTG
HHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCHHEEEEEEEECCCCC
RPGATILPLDRAGIELVDDWDGMGQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSN
CCCCEEEEECCCCCEEEECCCCCCCEEEECCCCHHHHEEEEHHHEEEECCCCCCCCCCCH
TFAQLFLTAAVAGISRAALRDAIALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
AETVVLVAAEALDAATEAFDAGRDDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGG
HHEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCHHCCCCCEEEECCC
ASSTKKATNFDRHWRNARTLSSHNPVTYKQRAIGQYLINGTPLPAKGFF
CCCCCHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNKPLSSKTLTTETPLPLASEALDQLLAAIADGESERERERILPHQQIALIKQARLGALR
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCEEE
LPVAAGGSGSTIRQLFEMVIRLAEADANVAHILRNHFSVVERLVRIPRDDQARAWQQRVA
CCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AGAIIGLATTELDSPQVGNITPNTTFTPDGDDYLLNGTKYYSTGTLYSDLVLVRAADPTG
HHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCHHEEEEEEEECCCCC
RPGATILPLDRAGIELVDDWDGMGQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSN
CCCCEEEEECCCCCEEEECCCCCCCEEEECCCCHHHHEEEEHHHEEEECCCCCCCCCCCH
TFAQLFLTAAVAGISRAALRDAIALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
AETVVLVAAEALDAATEAFDAGRDDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGG
HHEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCHHCCCCCEEEECCC
ASSTKKATNFDRHWRNARTLSSHNPVTYKQRAIGQYLINGTPLPAKGFF
CCCCCHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]