Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is perM [C]
Identifier: 146341139
GI number: 146341139
Start: 4410856
End: 4412034
Strand: Direct
Name: perM [C]
Synonym: BRADO4210
Alternate gene names: 146341139
Gene position: 4410856-4412034 (Clockwise)
Preceding gene: 146341134
Following gene: 146341141
Centisome position: 59.15
GC content: 67.26
Gene sequence:
>1179_bases GTGGGGGCCGATCAGCACAGAGGACGCCACATGACCGCCCCCGCAGACCCACGCCTCCAGGCCCGCAGCGACCTGGCCTG GGCCATTACCGTGGGCGGCATCGGCGTGATCCTGTTCATGGCCGGGCTCGCCTTCAGCTGGTATTACGCTGCCGCGTTGT TCCTGCTGTTTTCCGGCATGCTGCTGGGCGTCGCGCTCAATGCGATGACCACCCTGCTCGGCCGCGTGCTGCCCTGGCCG CATCCGCTGCGGCTCGCCATCGTCTGCCTGGCGCTGGCCGCCCTGCTCGTCGGCATCGTCTTCCTCGGCGGCACCACCAT CGCGGATCAGGCCAAGGTGCTGAGCGACACGATCAAGTCGCAGCTCGGCAACATCAAGGGCTTCCTCGACCGCAACGGCA TCGACACGAGCTTCTTCGATTTCAACGCCGGGACGCAGGCGACCTCCGCCCCCGACGGCGGCTCGACCACGCCGACGCAG TCAACCTCGCATGGATTGCCGGGCGGCCTGCCGTCGCCGAGCGCGCTGGCCTCCTCCGGCGGCGCCATCGTCAGCCAGAC TTTCAAGCTGCTGCTGGGTACCGTGAGCGCCGTCGGCAACTTCTTCATCGTGCTGTTCCTGGGCCTCGCCTTCGCGGCGC AGCCGGCGGTCTACCGCAGTGGATTGCTGTTCCTCGCACCGGCCAAGTATCGCGACCAGGCGACCGTGATCATCGACCGC ATCAGCTACACGCTCGAGCGCTGGCTGATCGCGCAGATCACGACGATGTTCGCGGTGTTCCTCGTCACCTGGATCGGGCT CGCCATCATCGGCGTGCAGAGCTCGTTCATCCTCGGCATCCAGGCCGGCCTGCTCGCCTTCATTCCGACGGTCGGCGCCA TCATCGCCGGCGTCATCGTGGTGCTGGCGAGCCTCGCCTCCGGCTGGGTCGCGGCCGTCTCCGCCTTCGTGCTGTTCCTC GGCGTGCACGCGATGGAGAGCTATGTGTTGACGCCGCTGATCCAGCGCCAGGCGCTCGATATCCCGCCGGCGACCTTGTT CGCGTTCCAGATCCTGCTCGGCATCGTGTTCGGCGTCTGGGGCCTGACCCTGGCGCTGCCGCTGATGGCGATCGCCAAGG TCATGATCGACTATTTCAAGAGCGACCGCCGCACAGAGGACGCCGCGGCGGCGATCTGA
Upstream 100 bases:
>100_bases GCGCGCGGGTCCCCAATGCCATTCCGGGCCCCGGCGGGCTTTGATCCGCGAAACCATTCCTCACGCCTGCGCTTGATCCC CATGCGGTTTTCGCCAATGT
Downstream 100 bases:
>100_bases GCGCCGGGCGTTCAGCCGGCCGGCATCGCCGTCTCAACGAGCTTGGCCCAATAGCTGATGCCGTGCGGGATCACGTCGTC GTTGAAATCGTATTCGGGGT
Product: putative transport protein/permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MGADQHRGRHMTAPADPRLQARSDLAWAITVGGIGVILFMAGLAFSWYYAAALFLLFSGMLLGVALNAMTTLLGRVLPWP HPLRLAIVCLALAALLVGIVFLGGTTIADQAKVLSDTIKSQLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDGGSTTPTQ STSHGLPGGLPSPSALASSGGAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAAQPAVYRSGLLFLAPAKYRDQATVIIDR ISYTLERWLIAQITTMFAVFLVTWIGLAIIGVQSSFILGIQAGLLAFIPTVGAIIAGVIVVLASLASGWVAAVSAFVLFL GVHAMESYVLTPLIQRQALDIPPATLFAFQILLGIVFGVWGLTLALPLMAIAKVMIDYFKSDRRTEDAAAAI
Sequences:
>Translated_392_residues MGADQHRGRHMTAPADPRLQARSDLAWAITVGGIGVILFMAGLAFSWYYAAALFLLFSGMLLGVALNAMTTLLGRVLPWP HPLRLAIVCLALAALLVGIVFLGGTTIADQAKVLSDTIKSQLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDGGSTTPTQ STSHGLPGGLPSPSALASSGGAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAAQPAVYRSGLLFLAPAKYRDQATVIIDR ISYTLERWLIAQITTMFAVFLVTWIGLAIIGVQSSFILGIQAGLLAFIPTVGAIIAGVIVVLASLASGWVAAVSAFVLFL GVHAMESYVLTPLIQRQALDIPPATLFAFQILLGIVFGVWGLTLALPLMAIAKVMIDYFKSDRRTEDAAAAI >Mature_391_residues GADQHRGRHMTAPADPRLQARSDLAWAITVGGIGVILFMAGLAFSWYYAAALFLLFSGMLLGVALNAMTTLLGRVLPWPH PLRLAIVCLALAALLVGIVFLGGTTIADQAKVLSDTIKSQLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDGGSTTPTQS TSHGLPGGLPSPSALASSGGAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAAQPAVYRSGLLFLAPAKYRDQATVIIDRI SYTLERWLIAQITTMFAVFLVTWIGLAIIGVQSSFILGIQAGLLAFIPTVGAIIAGVIVVLASLASGWVAAVSAFVLFLG VHAMESYVLTPLIQRQALDIPPATLFAFQILLGIVFGVWGLTLALPLMAIAKVMIDYFKSDRRTEDAAAAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41241; Mature: 41110
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADQHRGRHMTAPADPRLQARSDLAWAITVGGIGVILFMAGLAFSWYYAAALFLLFSGM CCCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGVALNAMTTLLGRVLPWPHPLRLAIVCLALAALLVGIVFLGGTTIADQAKVLSDTIKS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDGGSTTPTQSTSHGLPGGLPSPSALASSG HHCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAAQPAVYRSGLLFLAPAKYRDQATVIIDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCHHHHHHH ISYTLERWLIAQITTMFAVFLVTWIGLAIIGVQSSFILGIQAGLLAFIPTVGAIIAGVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLASLASGWVAAVSAFVLFLGVHAMESYVLTPLIQRQALDIPPATLFAFQILLGIVFGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLTLALPLMAIAKVMIDYFKSDRRTEDAAAAI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure GADQHRGRHMTAPADPRLQARSDLAWAITVGGIGVILFMAGLAFSWYYAAALFLLFSGM CCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGVALNAMTTLLGRVLPWPHPLRLAIVCLALAALLVGIVFLGGTTIADQAKVLSDTIKS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDGGSTTPTQSTSHGLPGGLPSPSALASSG HHCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAAQPAVYRSGLLFLAPAKYRDQATVIIDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCHHHHHHH ISYTLERWLIAQITTMFAVFLVTWIGLAIIGVQSSFILGIQAGLLAFIPTVGAIIAGVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLASLASGWVAAVSAFVLFLGVHAMESYVLTPLIQRQALDIPPATLFAFQILLGIVFGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLTLALPLMAIAKVMIDYFKSDRRTEDAAAAI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA