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The map label for this gene is rbsC [H]

Identifier: 146341094

GI number: 146341094

Start: 4366060

End: 4367097

Strand: Direct

Name: rbsC [H]

Synonym: BRADO4165

Alternate gene names: 146341094

Gene position: 4366060-4367097 (Clockwise)

Preceding gene: 146341093

Following gene: 146341116

Centisome position: 58.55

GC content: 64.35

Gene sequence:

>1038_bases
ATGGCGCATGGCGACACAGTTCCGATGCCGGAGGCGCAAGCGCGCCGCGCCGGCGGCATCGCGTCGCTGCTGCGGTCGCA
GATGCGCAACATCGCGCCGTTCCTGACCTTGATCTTCCTTACGGCGTTCTTCGCGATAGCCAGCCCGTCCTTCGCGACGC
TCGACAATGTCGGCAACATCCTGACGCAGGTGTCCGTCACCGGCATCATCGCCGTCGGCCTGACCTTCGTCATCCTCTGC
GCCGAGATCGACCTGTCGATCGCGGCCATCGCCAACGTCACCGGCATCGCGGTCGCCTACTTCACCTTGCAGGAGTCCTA
CGTCAATATCGCCAATGTCCCGCTGCCGGGCGTTGCCGCGATTTTGCTGGCGCTGGCGCTGTGCGCACTGCTCGGTGTGG
TCAACGCCTTTGGCCTGACCGTCATCGGCATCCCCTCCTTCATCATGACCTTGGCGATGATGCAGATCGCTGCGGGCATC
TCGGCCATGCTGGTGCGCGGCCAGATCGCCTACAAGGTACCGCCCTTGATCACGACGCTGGGCTCCGGCTCGATCGCCGG
TATCCCCTGGATCGTGGTCGTCGCCGCGCTGATGCTTCTGCTCGGCCACCTCGTGCTGACCTACACGCGCTTCGGCCGCT
ACGTCTACATGGTCGGCGGCAACCGCGAAGCGGCGGAATATTCCGGCCTGAACGTCAAGCTCATCCTAGGCAGCGTGATG
GTGATCTCGGCGGTCTGCTCGGGCATCGGCGGCATGCTCGGCGTGGCGCATTTCGGCAGCGCGCAGCAGAACGAGTTCGA
CACCTATCTGCTCGACTCGATCGCCGCGGTCGTGGTCGGCGGCACCAGCCTGTTCGGCGGCCGCGGCGGCATCGGAAATA
CCATCGTCGGCCTGTTCGTGCTCGGCGTGCTCAACAACGGCCTCGACCACGTCAACATTGATAGCTTCCTGAAGATCCTG
ATCCGCGGTCTGATCCTGCTGGCGGCATTGGTGATCAACGTCTACGCCCAACGCCTGCGCGCAAAGGCGGCGGATTGA

Upstream 100 bases:

>100_bases
GACCGCGTCATCGTGCTCAAGCGCGGCGAGGTCGTGCGCGAATTCGCCGGCGAAACCATCAGCAAAGACCGTCTGCTCGA
GGCGGCGTAGGGAGACGTCC

Downstream 100 bases:

>100_bases
GCGTAATGCCGTAGGATGGGCAAAGCAGCCGCCGAAGGCGGCAGCGTGCCCACCGTCCAACCGCGAGCCCGGTGCGCGAT
GGTGGGCACGGCGCAGGACA

Product: sugar ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAHGDTVPMPEAQARRAGGIASLLRSQMRNIAPFLTLIFLTAFFAIASPSFATLDNVGNILTQVSVTGIIAVGLTFVILC
AEIDLSIAAIANVTGIAVAYFTLQESYVNIANVPLPGVAAILLALALCALLGVVNAFGLTVIGIPSFIMTLAMMQIAAGI
SAMLVRGQIAYKVPPLITTLGSGSIAGIPWIVVVAALMLLLGHLVLTYTRFGRYVYMVGGNREAAEYSGLNVKLILGSVM
VISAVCSGIGGMLGVAHFGSAQQNEFDTYLLDSIAAVVVGGTSLFGGRGGIGNTIVGLFVLGVLNNGLDHVNIDSFLKIL
IRGLILLAALVINVYAQRLRAKAAD

Sequences:

>Translated_345_residues
MAHGDTVPMPEAQARRAGGIASLLRSQMRNIAPFLTLIFLTAFFAIASPSFATLDNVGNILTQVSVTGIIAVGLTFVILC
AEIDLSIAAIANVTGIAVAYFTLQESYVNIANVPLPGVAAILLALALCALLGVVNAFGLTVIGIPSFIMTLAMMQIAAGI
SAMLVRGQIAYKVPPLITTLGSGSIAGIPWIVVVAALMLLLGHLVLTYTRFGRYVYMVGGNREAAEYSGLNVKLILGSVM
VISAVCSGIGGMLGVAHFGSAQQNEFDTYLLDSIAAVVVGGTSLFGGRGGIGNTIVGLFVLGVLNNGLDHVNIDSFLKIL
IRGLILLAALVINVYAQRLRAKAAD
>Mature_344_residues
AHGDTVPMPEAQARRAGGIASLLRSQMRNIAPFLTLIFLTAFFAIASPSFATLDNVGNILTQVSVTGIIAVGLTFVILCA
EIDLSIAAIANVTGIAVAYFTLQESYVNIANVPLPGVAAILLALALCALLGVVNAFGLTVIGIPSFIMTLAMMQIAAGIS
AMLVRGQIAYKVPPLITTLGSGSIAGIPWIVVVAALMLLLGHLVLTYTRFGRYVYMVGGNREAAEYSGLNVKLILGSVMV
ISAVCSGIGGMLGVAHFGSAQQNEFDTYLLDSIAAVVVGGTSLFGGRGGIGNTIVGLFVLGVLNNGLDHVNIDSFLKILI
RGLILLAALVINVYAQRLRAKAAD

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=318, Percent_Identity=34.5911949685535, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1790524, Length=313, Percent_Identity=32.5878594249201, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI145693152, Length=299, Percent_Identity=33.1103678929766, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788896, Length=343, Percent_Identity=28.5714285714286, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789992, Length=358, Percent_Identity=29.608938547486, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI145693214, Length=251, Percent_Identity=32.6693227091633, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788471, Length=320, Percent_Identity=31.875, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87082395, Length=279, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787794, Length=287, Percent_Identity=26.4808362369338, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35789; Mature: 35658

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHGDTVPMPEAQARRAGGIASLLRSQMRNIAPFLTLIFLTAFFAIASPSFATLDNVGNI
CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTQVSVTGIIAVGLTFVILCAEIDLSIAAIANVTGIAVAYFTLQESYVNIANVPLPGVAA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ILLALALCALLGVVNAFGLTVIGIPSFIMTLAMMQIAAGISAMLVRGQIAYKVPPLITTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHCC
GSGSIAGIPWIVVVAALMLLLGHLVLTYTRFGRYVYMVGGNREAAEYSGLNVKLILGSVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCCEEEHHHHHHH
VISAVCSGIGGMLGVAHFGSAQQNEFDTYLLDSIAAVVVGGTSLFGGRGGIGNTIVGLFV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH
LGVLNNGLDHVNIDSFLKILIRGLILLAALVINVYAQRLRAKAAD
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHGDTVPMPEAQARRAGGIASLLRSQMRNIAPFLTLIFLTAFFAIASPSFATLDNVGNI
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LTQVSVTGIIAVGLTFVILCAEIDLSIAAIANVTGIAVAYFTLQESYVNIANVPLPGVAA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ILLALALCALLGVVNAFGLTVIGIPSFIMTLAMMQIAAGISAMLVRGQIAYKVPPLITTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCHHHHCC
GSGSIAGIPWIVVVAALMLLLGHLVLTYTRFGRYVYMVGGNREAAEYSGLNVKLILGSVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCCEEEHHHHHHH
VISAVCSGIGGMLGVAHFGSAQQNEFDTYLLDSIAAVVVGGTSLFGGRGGIGNTIVGLFV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH
LGVLNNGLDHVNIDSFLKILIRGLILLAALVINVYAQRLRAKAAD
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]