Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is queF [H]
Identifier: 146341024
GI number: 146341024
Start: 4285712
End: 4286188
Strand: Direct
Name: queF [H]
Synonym: BRADO4095
Alternate gene names: 146341024
Gene position: 4285712-4286188 (Clockwise)
Preceding gene: 146340992
Following gene: 146341025
Centisome position: 57.48
GC content: 67.71
Gene sequence:
>477_bases ATGGCGAAAAGATCCAACACCACCATGACATCGGCCGGCCTTCAGCTCGGCCGCGAGGTGGCGCCCCCCGACAGCCCGGA GACGGCGAAGCTCGACCGCGTTCCCAACCCGCAGAGGGACACGGATTACCTGGCCCGCTTCACCGTGCCGGAGTTCACCT CGCTGTGCCCGGTGACGGGCCAGCCCGATTTCGCCCATCTGGTCATCGACTACGCCCCCGGCCCGTGGCTGGTCGAGTCC AAGTCGCTGAAGCTGTACCTCGCGAGCTTCCGCAACCACGGCGCCTTCCACGAGGACTGCACGGTCGCCATCGGCAAGCG CCTGACCGCCGAGATCAAGCCCAAATGGTTGCGCATCGGCGGCTACTGGTACCCCCGCGGCGGCATCCCGATCGATGTGT TCTGGCAGACGGGCCGGCTGCCGAAGGGGCTATGGGTGCCAGACCAGGGGGTAGCGCCGTATCGTGGGCGGGGGTGA
Upstream 100 bases:
>100_bases GCGCGGAAGTCGCCTGGAAGTCGTGTCGAGATCACGAACCGGATGACGCAGGCGCCTCGATTGGCTAAACGGGCGCCAGC TGCGACAGGTGACACGACAG
Downstream 100 bases:
>100_bases GGCTGATCGAGGACCGGGAGGTGCGGCCGTGACCGGCACTGTCGAATATGCCCGCCTGTCGGTGTACTGTCCCAAGTGCA CCACAACTATCACGTGGCCG
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAKRSNTTMTSAGLQLGREVAPPDSPETAKLDRVPNPQRDTDYLARFTVPEFTSLCPVTGQPDFAHLVIDYAPGPWLVES KSLKLYLASFRNHGAFHEDCTVAIGKRLTAEIKPKWLRIGGYWYPRGGIPIDVFWQTGRLPKGLWVPDQGVAPYRGRG
Sequences:
>Translated_158_residues MAKRSNTTMTSAGLQLGREVAPPDSPETAKLDRVPNPQRDTDYLARFTVPEFTSLCPVTGQPDFAHLVIDYAPGPWLVES KSLKLYLASFRNHGAFHEDCTVAIGKRLTAEIKPKWLRIGGYWYPRGGIPIDVFWQTGRLPKGLWVPDQGVAPYRGRG >Mature_157_residues AKRSNTTMTSAGLQLGREVAPPDSPETAKLDRVPNPQRDTDYLARFTVPEFTSLCPVTGQPDFAHLVIDYAPGPWLVESK SLKLYLASFRNHGAFHEDCTVAIGKRLTAEIKPKWLRIGGYWYPRGGIPIDVFWQTGRLPKGLWVPDQGVAPYRGRG
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 17623; Mature: 17492
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRSNTTMTSAGLQLGREVAPPDSPETAKLDRVPNPQRDTDYLARFTVPEFTSLCPVTG CCCCCCCEEEHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHEEEECCCCHHHCCCCCC QPDFAHLVIDYAPGPWLVESKSLKLYLASFRNHGAFHEDCTVAIGKRLTAEIKPKWLRIG CCCEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCHHEECCCCEEECCCCEEEEEC GYWYPRGGIPIDVFWQTGRLPKGLWVPDQGVAPYRGRG CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKRSNTTMTSAGLQLGREVAPPDSPETAKLDRVPNPQRDTDYLARFTVPEFTSLCPVTG CCCCCCEEEHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHEEEECCCCHHHCCCCCC QPDFAHLVIDYAPGPWLVESKSLKLYLASFRNHGAFHEDCTVAIGKRLTAEIKPKWLRIG CCCEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCHHEECCCCEEECCCCEEEEEC GYWYPRGGIPIDVFWQTGRLPKGLWVPDQGVAPYRGRG CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA