Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is bla [H]
Identifier: 146340992
GI number: 146340992
Start: 4252784
End: 4253641
Strand: Direct
Name: bla [H]
Synonym: BRADO4063
Alternate gene names: 146340992
Gene position: 4252784-4253641 (Clockwise)
Preceding gene: 146340991
Following gene: 146341024
Centisome position: 57.03
GC content: 70.16
Gene sequence:
>858_bases GTGACACGGCGGCAGGTGTTTCCGCTCGCGCTCGCACCTCTGTTCGTGAAGCCGGCGTTGGCTGCCGACTTCCAGGAGAC CATCGCAGGCATCGAGGCCGACAGCGCCGGGCGGCTCGGCGTGGCCCTGCTGGACACCGCGAGCGGCGCACTCAGCGGCC ACCGGCTCGACGAGCGGTTCCCGATGTGCAGCACCTTCAAGGCCCTGCTCGCGGCGGCGATCCTGACCAAGGTCGATGCC GGTGCCGAGCAGCTCTCGCGGCGACTTCCGATCACGCAAGGCGACATCCTGTCCTACGCGCCGGTCACCAAGCTGCATGT CGGCACCTCCGGCCTCTCGATCGGCGAACTCTGCGAGGCGACCGTCACGCTCAGCGACAACACGGCAGCGAACCTGCTGC TGGCCACGCTTGACGGCCCGGCTGGGCTCACACGCGCGACCCGCGGCTTCGGTGACGCCATCACCCGGCTCGACCGCATC GAGCCCGCGCTGAACGAAAGCGTGCCAGATGATCCCCGCGACACCACGACGCCGGCCGCAATGGCGCAGACCCTGGCGAA GCTGACGACCGGAAATGCGTTGTCGACATCGTCGCGCGACGTCCTGAACGGCTGGCTGATCGGCTGCAAGACCGGGGCGG CCAGGCTCCGCGCCGGCCTGCCCGCGTCATGGCGCGTCGGCGACAAGACCGGCTCCGGCGAGAACGGCAGCAGCAACGAT GTTGCGGTGATCTGGCCGGCGGGGCGCGCGCCGGTGATCGTGACGAGCTATCTGACCGAAACCAAGGCGAGTGATGAGAA GCGCAACGCCGCTCACGCCGCCGTCGGCCGCGCGGTCGCGGCGGCCCTCGGCGCCTGA
Upstream 100 bases:
>100_bases GCTATGTCAGGGCTTGGGAGAAGCCGTCCGATCACGTCCCGGTGTGGGCCGATTTCGATCTGGAGACGGCGTAACGTTCA AGGCAGGTCCGATGAGCTTC
Downstream 100 bases:
>100_bases GCTGCGCGCGCGCCGAGATCGATCTCGCGAACGACGGCCGCGACCGCGTCGAAGCCGGCGCGCAGTTGGCGGACCTCGCG CGCGGCGAACCGAACGCCGA
Product: putative beta-lactamase
Products: NA
Alternate protein names: Beta-lactamase MEN-1; Cefotaximase 1 [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTRRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGALSGHRLDERFPMCSTFKALLAAAILTKVDA GAEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEATVTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRI EPALNESVPDDPRDTTTPAAMAQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSND VAVIWPAGRAPVIVTSYLTETKASDEKRNAAHAAVGRAVAAALGA
Sequences:
>Translated_285_residues MTRRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGALSGHRLDERFPMCSTFKALLAAAILTKVDA GAEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEATVTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRI EPALNESVPDDPRDTTTPAAMAQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSND VAVIWPAGRAPVIVTSYLTETKASDEKRNAAHAAVGRAVAAALGA >Mature_284_residues TRRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGALSGHRLDERFPMCSTFKALLAAAILTKVDAG AEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEATVTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRIE PALNESVPDDPRDTTTPAAMAQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSNDV AVIWPAGRAPVIVTSYLTETKASDEKRNAAHAAVGRAVAAALGA
Specific function: Broad spectrum beta-lactamase which confers resistance to penicillins, as well as first, second and third-generation cephalosporins [H]
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29383; Mature: 29251
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGALSGHRLDERF CCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHC PMCSTFKALLAAAILTKVDAGAEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEA CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCE TVTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRIEPALNESVPDDPRDTTTPAA EEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHH MAQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSND HHHHHHHHHCCCCCCCCCHHHHHHEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC VAVIWPAGRAPVIVTSYLTETKASDEKRNAAHAAVGRAVAAALGA EEEEECCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGALSGHRLDERF CCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHC PMCSTFKALLAAAILTKVDAGAEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEA CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCE TVTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRIEPALNESVPDDPRDTTTPAA EEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHH MAQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSND HHHHHHHHHCCCCCCCCCHHHHHHEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC VAVIWPAGRAPVIVTSYLTETKASDEKRNAAHAAVGRAVAAALGA EEEEECCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8834913; 1633193 [H]