Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yajO [H]
Identifier: 146340990
GI number: 146340990
Start: 4250742
End: 4251920
Strand: Reverse
Name: yajO [H]
Synonym: BRADO4061
Alternate gene names: 146340990
Gene position: 4251920-4250742 (Counterclockwise)
Preceding gene: 146340993
Following gene: 146340987
Centisome position: 57.02
GC content: 66.58
Gene sequence:
>1179_bases ATGCGGCGCTCCGGGTCAAGGCGGTTGGCGGGGGGACTCACAGCCGCGCGCAACAATGCCATGCATGGTCTACCGTGGCG GCGGGCTGCCGGCCGGCGTATTCATCTTGCCGTCGCGATGCTGGTCCAGGAGACCACGACATCTGAGGAGATCATCATGG ACCATCGACGTCTCGGCCATTCCGGCCTGCGCGTGCCCGCGCTCAGCTTCGGCACCGCCACCTTCGGCGGCGGCAACGAC TTCTTCAAGGCCTGGGGCGCGACCGATACCGATGGCGCGAGCCGGCTGATCGACGTCTGCCTCGATCATGGCGTGTCGAT GTTCGACAGCGCCGATGTGTATTCGAGCGGGCTTGCCGAGAGCATTCTCGGCCAGGCCATCAAAGGCAAGCGCAACCGGC TCCTGATCTCGACCAAGGGCACGTTTCCGAAGGGTGACGGTCCCAACGACTACGGCTCGTCGCGCCAGCATCTGATCGAG GCGGTGGAGGGCTCGCTCAAGCGCCTCGGCGTCGATCACATCGATCTCTATCAGCTGCACGGTCAGGACTACAACACGCC GGTCGAGGAGACGCTCTCGGCGCTCGACCAGCTCGTCCGCGACGGCAAGATCCGCTACATCGGCGGCTCGAATTTCTCCG GCTGGCACCTGATGAAGTCGCTGTCGGCCTCGGACCGCTACGGGTATCCGCGCTATGTCGCGCATCAGGCCTATTACTCG CTGCTCAACCGCGACTATGAGTGGGAGCTGATGCCGCTCGGCATCGACCAGGGCGTCGGCGCCGTCATCTGGAGCCCGCT CGGCTGGGGCAAGCTGACCGGCAAGATCCGCCGGGGCCAGCCGGCCAAGCCCGGCACCCGTGCCCACGACATCGCCGGCA CCGGCCCGCAGTTCGAGGAGGAACGGCTGTATCGCGTGGTCGACGCGCTCGACGCCGTCGCCAAGCAAATCGGCAAGACC ATTCCGCAGGTGGCGCTGAACTGGCTGCTGCAGCGCCCGACCGTGTCGACCATCATCGTCGGCGCCCGCGACGAGGCTCA ACTGGTCGAGAACATCGGTGCCGTCGGCTGGAGCCTGACGGCGGAGCAGGTGGCATCGCTCGATGCCGCCAGCGACATTC CCGCCGCCTATCCGGTCTGGCACCAGCGCGGCTTCCCGATGCTGAACGAGCGGGGCTAG
Upstream 100 bases:
>100_bases CGAGGTGCTCGATCCGTTGCCGGATCGAATTGACGTTCCAGGTGGCGATGCGCATCGGATGGTTCCAGGAAGCTCGGAGG GTTCGTCCGGTTAGATCAAG
Downstream 100 bases:
>100_bases CAGATCGGCTTTGCAAGCGTCTGTGGATGCGTGGCGGCAGCGCCGCGCGTGCGGCGCTGATCCATTTGACGGCCGTCCAG CGCGAGCAGTAAACTCTCAG
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MRRSGSRRLAGGLTAARNNAMHGLPWRRAAGRRIHLAVAMLVQETTTSEEIIMDHRRLGHSGLRVPALSFGTATFGGGND FFKAWGATDTDGASRLIDVCLDHGVSMFDSADVYSSGLAESILGQAIKGKRNRLLISTKGTFPKGDGPNDYGSSRQHLIE AVEGSLKRLGVDHIDLYQLHGQDYNTPVEETLSALDQLVRDGKIRYIGGSNFSGWHLMKSLSASDRYGYPRYVAHQAYYS LLNRDYEWELMPLGIDQGVGAVIWSPLGWGKLTGKIRRGQPAKPGTRAHDIAGTGPQFEEERLYRVVDALDAVAKQIGKT IPQVALNWLLQRPTVSTIIVGARDEAQLVENIGAVGWSLTAEQVASLDAASDIPAAYPVWHQRGFPMLNERG
Sequences:
>Translated_392_residues MRRSGSRRLAGGLTAARNNAMHGLPWRRAAGRRIHLAVAMLVQETTTSEEIIMDHRRLGHSGLRVPALSFGTATFGGGND FFKAWGATDTDGASRLIDVCLDHGVSMFDSADVYSSGLAESILGQAIKGKRNRLLISTKGTFPKGDGPNDYGSSRQHLIE AVEGSLKRLGVDHIDLYQLHGQDYNTPVEETLSALDQLVRDGKIRYIGGSNFSGWHLMKSLSASDRYGYPRYVAHQAYYS LLNRDYEWELMPLGIDQGVGAVIWSPLGWGKLTGKIRRGQPAKPGTRAHDIAGTGPQFEEERLYRVVDALDAVAKQIGKT IPQVALNWLLQRPTVSTIIVGARDEAQLVENIGAVGWSLTAEQVASLDAASDIPAAYPVWHQRGFPMLNERG >Mature_392_residues MRRSGSRRLAGGLTAARNNAMHGLPWRRAAGRRIHLAVAMLVQETTTSEEIIMDHRRLGHSGLRVPALSFGTATFGGGND FFKAWGATDTDGASRLIDVCLDHGVSMFDSADVYSSGLAESILGQAIKGKRNRLLISTKGTFPKGDGPNDYGSSRQHLIE AVEGSLKRLGVDHIDLYQLHGQDYNTPVEETLSALDQLVRDGKIRYIGGSNFSGWHLMKSLSASDRYGYPRYVAHQAYYS LLNRDYEWELMPLGIDQGVGAVIWSPLGWGKLTGKIRRGQPAKPGTRAHDIAGTGPQFEEERLYRVVDALDAVAKQIGKT IPQVALNWLLQRPTVSTIIVGARDEAQLVENIGAVGWSLTAEQVASLDAASDIPAAYPVWHQRGFPMLNERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=329, Percent_Identity=35.258358662614, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI27436969, Length=316, Percent_Identity=36.0759493670886, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI27436962, Length=331, Percent_Identity=35.3474320241692, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI27436964, Length=318, Percent_Identity=34.9056603773585, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI4504825, Length=314, Percent_Identity=35.9872611464968, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI27436971, Length=327, Percent_Identity=33.0275229357798, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI223718702, Length=285, Percent_Identity=29.8245614035088, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI41152114, Length=285, Percent_Identity=27.719298245614, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=273, Percent_Identity=28.2051282051282, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=34.9693251533742, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1789375, Length=327, Percent_Identity=32.4159021406728, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789199, Length=357, Percent_Identity=31.9327731092437, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1788070, Length=332, Percent_Identity=32.5301204819277, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1788081, Length=329, Percent_Identity=25.531914893617, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI48994888, Length=270, Percent_Identity=26.2962962962963, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI212645785, Length=313, Percent_Identity=25.5591054313099, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=345, Percent_Identity=29.8550724637681, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=26.4026402640264, Blast_Score=119, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6323998, Length=328, Percent_Identity=26.219512195122, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6319951, Length=340, Percent_Identity=24.4117647058824, Blast_Score=106, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=26.953125, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI24646155, Length=320, Percent_Identity=27.1875, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24640980, Length=325, Percent_Identity=24.3076923076923, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI45549126, Length=325, Percent_Identity=24.3076923076923, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24646159, Length=319, Percent_Identity=25.3918495297806, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42873; Mature: 42873
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSGSRRLAGGLTAARNNAMHGLPWRRAAGRRIHLAVAMLVQETTTSEEIIMDHRRLGH CCCCCCCHHHCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC SGLRVPALSFGTATFGGGNDFFKAWGATDTDGASRLIDVCLDHGVSMFDSADVYSSGLAE CCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHH SILGQAIKGKRNRLLISTKGTFPKGDGPNDYGSSRQHLIEAVEGSLKRLGVDHIDLYQLH HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC GQDYNTPVEETLSALDQLVRDGKIRYIGGSNFSGWHLMKSLSASDRYGYPRYVAHQAYYS CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH LLNRDYEWELMPLGIDQGVGAVIWSPLGWGKLTGKIRRGQPAKPGTRAHDIAGTGPQFEE HHCCCCCEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERLYRVVDALDAVAKQIGKTIPQVALNWLLQRPTVSTIIVGARDEAQLVENIGAVGWSLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCC AEQVASLDAASDIPAAYPVWHQRGFPMLNERG HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MRRSGSRRLAGGLTAARNNAMHGLPWRRAAGRRIHLAVAMLVQETTTSEEIIMDHRRLGH CCCCCCCHHHCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC SGLRVPALSFGTATFGGGNDFFKAWGATDTDGASRLIDVCLDHGVSMFDSADVYSSGLAE CCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHH SILGQAIKGKRNRLLISTKGTFPKGDGPNDYGSSRQHLIEAVEGSLKRLGVDHIDLYQLH HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC GQDYNTPVEETLSALDQLVRDGKIRYIGGSNFSGWHLMKSLSASDRYGYPRYVAHQAYYS CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH LLNRDYEWELMPLGIDQGVGAVIWSPLGWGKLTGKIRRGQPAKPGTRAHDIAGTGPQFEE HHCCCCCEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERLYRVVDALDAVAKQIGKTIPQVALNWLLQRPTVSTIIVGARDEAQLVENIGAVGWSLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCC AEQVASLDAASDIPAAYPVWHQRGFPMLNERG HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]