Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is argS [H]
Identifier: 146340981
GI number: 146340981
Start: 4240058
End: 4241854
Strand: Reverse
Name: argS [H]
Synonym: BRADO4052
Alternate gene names: 146340981
Gene position: 4241854-4240058 (Counterclockwise)
Preceding gene: 146340982
Following gene: 146340980
Centisome position: 56.89
GC content: 63.38
Gene sequence:
>1797_bases ATGGTTGAACAAGCGTCCACCCCCTATCTTTTTGCTGACATGCTGGCCCGCGTGCACGCCATCTGCGCCGCGCTGGCCAA GTCTGGCGGCTGGCCCGAAGGCATCGATTTTTCGCGCGTGGTGGTCGAGCCGCCGCGCGATCCGAGCCACGGCGACATGG CGACCAATGCCGCGATGGTGCTGGCCAAGGAGGCCAAGGCCAAGCCGCGCGATCTCGCCGAACAAATTGCCGAGCGGTTG CGCGCCGATGAGCTGGTGGCGAAGGTGGACGTCGCCGGTCCCGGCTTCATCAATCTCACCTTGCAGCCCTCCGTCTGGTC CAAGGCCCTCGCCACCATCCTGCGTGAAGGTGCCGCCTACGGCCGCGTCGCGCCCGTGCCGGGCGCGCCCAAGGTGAATG TCGAGTACGTCTCGGCGAACCCTACGGGACCGATGCATGTCGGCCACTGCCGCGGTGCCGTGTTCGGCGACGCGCTGTCG AGCCTGTTGCAGTTCGCAGGCCGCGACGTCACGCGCGAGTACTACATTAACGATGCCGGCGCGCAGGTCGACGTGCTCGC GCGCTCCGCGTATCTCCGCTATCGCGAGGCGCTCGGCGAGGACATCGGCGCGATCCCGGAAGGGCTCTATCCCGGCGACT ATCTGAAGCCGGTCGGGCAGGCGCTCAAGACCGAGCACGGCGACAAGCTGAAGGCGATGCCTGACGCGCAGTGGCTGCCG ATCGTGCGCGACAAGGCGATCGCGATGATGATGGACGAGATCAAGGATGATCTCGCCGCGCTCAACATCAGGCACGACGT GTTCTTCTCCGAGCGCTCGCTGATCACGGGCGGCAACAACAAGGTCGCCGAGACGATCGATTTCCTGCGTGAACGCGGTG ACGTCTATGAAGGCCGCCTGCCGCCGCCCAAGGGTGCGCCGGTCGAGGACTGGGAGGACCGCGAGCAGCTGCTGTTCCGC GCCACCGCCTTTGGCGATGACGTCGATCGTCCGCTGATCAAGTCGGACGGGAGCTACACCTATTTCGCCTCCGACATTGC CAACCACCGGCACAAGTTCGAGCGCGGCTTTGCCGATCTCATCGACGTGTTCGGCGCCGATCATGGCGGCTATATCAAGC GCATGCAGGCCGCGGTGAAGGCGGTGACCGCGGCGCAGGCTACGCTCGACGTCAAGGTCGTGCAGCTCGTGAAGCTGCTG CGCAATGGCGAGCCGGTGAAGATGTCCAAGCGCTCCGGCGACTTCGTCACCTTGCGCGAAGTTGTTGATGAAGTAGGGCG CGATGCGGTCCGTTTCATGATGCTTTATCGCAAAAATGATGCGGTGCTCGATTTCGACCTCGCCAAGGTCATAGAGCAGT CGAAGGACAATCCCGTCTTCTACGTCCAATACGGGCACGCACGCGGGCATTCGATCTTCCGTAACGCCCGGGAGAGCTTG CCGGAACTGCCTGAGGAGGAGGGGGCGCGGATCGCCTTCCTGCGCGAGGCGAAGCTGGAAAGACTCGCCGACTCGGCCGA ACACGACCTCTTGAAACGGCTGGCGCTGTACCCACGTACGGTGGAAAGCGCGGCGATGGCCCATGAGCCCCACCGGATCG CCTTCTACCTCTATGAACTTGCAAGCGAATTTCACGCCCTCTGGACGCGGGGCCGGGATTTGCCCTATTTACGCTTCATT ATCGATGATGATGCAGAATTGACCAAGGCACGTTTGGCCATGGTTCAGGGCGTCGTCTCGGTTCTGGCGTCGGGACTTGC GATCTTGGGCGTTAATGCTCCTGATGCAATGCGCTGA
Upstream 100 bases:
>100_bases GCCGGATCAGCCACTTTATCGCCGGAATGACCGACCGTTTTGCGTTAACCGAACACCACCGGCTTTTTGACTCGACCCCG GATTTGCGTTAGGCGGCGGC
Downstream 100 bases:
>100_bases TTGGGGGAAACACGCGACTTCAGTTGGGGGCCTCAATCTGGCAGGGTCCGCCTTAGGACGCATATGCGGCTCACCCGCAG GGACGCTTCATCACGATGGC
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MVEQASTPYLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAKPRDLAEQIAERL RADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPGAPKVNVEYVSANPTGPMHVGHCRGAVFGDALS SLLQFAGRDVTREYYINDAGAQVDVLARSAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLP IVRDKAIAMMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPVEDWEDREQLLFR ATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGADHGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLL RNGEPVKMSKRSGDFVTLREVVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESL PELPEEEGARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHALWTRGRDLPYLRFI IDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAMR
Sequences:
>Translated_598_residues MVEQASTPYLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAKPRDLAEQIAERL RADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPGAPKVNVEYVSANPTGPMHVGHCRGAVFGDALS SLLQFAGRDVTREYYINDAGAQVDVLARSAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLP IVRDKAIAMMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPVEDWEDREQLLFR ATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGADHGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLL RNGEPVKMSKRSGDFVTLREVVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESL PELPEEEGARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHALWTRGRDLPYLRFI IDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAMR >Mature_598_residues MVEQASTPYLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAKPRDLAEQIAERL RADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPGAPKVNVEYVSANPTGPMHVGHCRGAVFGDALS SLLQFAGRDVTREYYINDAGAQVDVLARSAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLP IVRDKAIAMMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPVEDWEDREQLLFR ATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGADHGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLL RNGEPVKMSKRSGDFVTLREVVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESL PELPEEEGARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHALWTRGRDLPYLRFI IDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAMR
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=617, Percent_Identity=25.9319286871961, Blast_Score=133, Evalue=4e-31, Organism=Escherichia coli, GI1788184, Length=596, Percent_Identity=26.510067114094, Blast_Score=129, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71985061, Length=623, Percent_Identity=23.916532905297, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71985068, Length=572, Percent_Identity=23.6013986013986, Blast_Score=93, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6320548, Length=572, Percent_Identity=25.5244755244755, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859963, Length=623, Percent_Identity=25.0401284109149, Blast_Score=119, Evalue=4e-27,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 66094; Mature: 66094
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEQASTPYLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHH LAKEAKAKPRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHCCCCC GRVAPVPGAPKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAG CCCCCCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCC AQVDVLARSAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC IVRDKAIAMMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCC PPPKGAPVEDWEDREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHH IDVFGADHGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLRE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHH VVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESL HHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC PELPEEEGARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYEL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH ASEFHALWTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAMR HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC >Mature Secondary Structure MVEQASTPYLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHH LAKEAKAKPRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHCCCCC GRVAPVPGAPKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAG CCCCCCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCC AQVDVLARSAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC IVRDKAIAMMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHHHCCCCCCCCC PPPKGAPVEDWEDREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADL CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHH IDVFGADHGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLRE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHH VVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESL HHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC PELPEEEGARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYEL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH ASEFHALWTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAMR HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA