Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340980
Identifier: 146340980
GI number: 146340980
Start: 4238406
End: 4239962
Strand: Reverse
Name: 146340980
Synonym: BRADO4051
Alternate gene names: NA
Gene position: 4239962-4238406 (Counterclockwise)
Preceding gene: 146340981
Following gene: 146340979
Centisome position: 56.86
GC content: 67.24
Gene sequence:
>1557_bases ATGGCTGATCGTTACCAGGACAGACCCTTTCCCGCTGATGGTTTTGGCCGCGGTGGAAACCAGCAGGCCGATGCCGATCC GCTCGCCGAGCTCGCCCGCCTGATCGGGCAGAACGATCCTTTTGCCGCATCAGGCCGGGGAACCCCGCAGCCCCAGCAGC GGCCGATGGCCCGCCCCGCGGCACCTGCTCCGGAACAGGCCGCCGCCGGCATGCCGCCGGCCGGTGCTCCGGCGTGGATG CAGCGTGCCCAGCCCGCGGCGGCCAACCCATTTGCCGACATGGGGCGCGAGCCGCCGCAGCCGGCACCCGTTCCTCCGCC GTTTCCCGCGGGCTTCCAGGATCCGCGCGGTCAGCCAGGCTTCCCCGAGCAGGATTTCGCGCCCGCCGCGCCGCGGCAGC AGCCCGGTTTTCCGAACCCCGAATTTGCCGACCAGTTGTCCAAGCTCGACTACAGCGTGGGCGATTCGCGCCACGGCTTT GCCGAGAACGATCGCGATTACAACCGCGATGGCTTTGATGACAACGGGCAGGACTCCTCGCGCTACGACGATGCGCTGTT CGGCCAGATGGGCGGGGACCAGCAGGGTTTTCAAGGCGATAACGACTTCCAGGACGGTCAATACGGCTATCAGGACGGCT ACGACGAGGGCGAGGAAGAGGAGCGGCCGCGGCGGCGCGGCGGCATGAGCACCGTGCTCGCGGTGCTGACCCTTGCGGTG GTCGGAACCGGCGGCGCCTATGGCTACAAGACCTACATCTCCTCCAGCCGCACGGGTGAGCCGCCGATCATCCGCGCTGA TAACAGCCCGACCAAGATCATGGCGCAGCAGGACACGACACCGAAGGTGCCGGACCGGCTGCTTGGCAATGATGGCGGCG AGAAGTTGGTGTCCCGAGAGGAGGCACCGATGGATCTCAACACCACCCGTAGCGGCAGTCCGCGCGTGGTGTTTCCGCAG ATGAACCAGAACGGCGGGACTCCGCCGGCCGCTGCCCCGAGCGTGACGCCGGCGCAGATCGCCAACGCCAACGGGATCCT GCCCAACAGCGATCCGCGGCCGATCAAGACACTGTCGGTCACCGGCGGCAACCAGGGCGCCGCAGCTGACCCGGCTGCCA TGCCGCCGGCCAATCCGCCGCCGGCCAAGCAGGCGAAGGGCAAGAAGTCGCCGGCCAACGCGAATGCCTCTGCGGCTACC GACACCCCGATGCCGCTGACCTCGCAGGCTGCGCCCGCCGCAGCGCCGGCCCGCATCGCGGCTGCCGTTCCGGTCACCGA ACAGACCAGCAGCGGCACCACGGGCGGCTATCTGGTCTCGATCTCGTCGCAGGCCAGTGAGGCTGAGGCGATGTCGTCTT ACAAGGCGGTGCAGGACAAGTACGGCGCGGTGCTCGGCAAATACGAGCCGATCATCAAGCGGACGGATCTGGGCGACAAG GGTGGTGTCAAGTATCGCGCGGCTGTCGGTCCCTTCGCGACGAGGGAGGAGGCCAACAAGATGTGCGGAACGTTGAAAAC CGCCGGCGGACAGTGTTTCCTGTTTAGCAATAATTAA
Upstream 100 bases:
>100_bases GCTGATTGGGGGAAACACGCGACTTCAGTTGGGGGCCTCAATCTGGCAGGGTCCGCCTTAGGACGCATATGCGGCTCACC CGCAGGGACGCTTCATCACG
Downstream 100 bases:
>100_bases GGCTCGCTTGACCGCCCCCGAGACGGGGTCTATGCGGCCCGCATGACCATGCGGGCTTTCATTACCGGCATTTCCGGCCC GGACCTCACCGAGGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation Domain-Containing Protein; Sporulation Domain Protein; Proline-Rich Protein; Proline-Rich Region
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MADRYQDRPFPADGFGRGGNQQADADPLAELARLIGQNDPFAASGRGTPQPQQRPMARPAAPAPEQAAAGMPPAGAPAWM QRAQPAAANPFADMGREPPQPAPVPPPFPAGFQDPRGQPGFPEQDFAPAAPRQQPGFPNPEFADQLSKLDYSVGDSRHGF AENDRDYNRDGFDDNGQDSSRYDDALFGQMGGDQQGFQGDNDFQDGQYGYQDGYDEGEEEERPRRRGGMSTVLAVLTLAV VGTGGAYGYKTYISSSRTGEPPIIRADNSPTKIMAQQDTTPKVPDRLLGNDGGEKLVSREEAPMDLNTTRSGSPRVVFPQ MNQNGGTPPAAAPSVTPAQIANANGILPNSDPRPIKTLSVTGGNQGAAADPAAMPPANPPPAKQAKGKKSPANANASAAT DTPMPLTSQAAPAAAPARIAAAVPVTEQTSSGTTGGYLVSISSQASEAEAMSSYKAVQDKYGAVLGKYEPIIKRTDLGDK GGVKYRAAVGPFATREEANKMCGTLKTAGGQCFLFSNN
Sequences:
>Translated_518_residues MADRYQDRPFPADGFGRGGNQQADADPLAELARLIGQNDPFAASGRGTPQPQQRPMARPAAPAPEQAAAGMPPAGAPAWM QRAQPAAANPFADMGREPPQPAPVPPPFPAGFQDPRGQPGFPEQDFAPAAPRQQPGFPNPEFADQLSKLDYSVGDSRHGF AENDRDYNRDGFDDNGQDSSRYDDALFGQMGGDQQGFQGDNDFQDGQYGYQDGYDEGEEEERPRRRGGMSTVLAVLTLAV VGTGGAYGYKTYISSSRTGEPPIIRADNSPTKIMAQQDTTPKVPDRLLGNDGGEKLVSREEAPMDLNTTRSGSPRVVFPQ MNQNGGTPPAAAPSVTPAQIANANGILPNSDPRPIKTLSVTGGNQGAAADPAAMPPANPPPAKQAKGKKSPANANASAAT DTPMPLTSQAAPAAAPARIAAAVPVTEQTSSGTTGGYLVSISSQASEAEAMSSYKAVQDKYGAVLGKYEPIIKRTDLGDK GGVKYRAAVGPFATREEANKMCGTLKTAGGQCFLFSNN >Mature_517_residues ADRYQDRPFPADGFGRGGNQQADADPLAELARLIGQNDPFAASGRGTPQPQQRPMARPAAPAPEQAAAGMPPAGAPAWMQ RAQPAAANPFADMGREPPQPAPVPPPFPAGFQDPRGQPGFPEQDFAPAAPRQQPGFPNPEFADQLSKLDYSVGDSRHGFA ENDRDYNRDGFDDNGQDSSRYDDALFGQMGGDQQGFQGDNDFQDGQYGYQDGYDEGEEEERPRRRGGMSTVLAVLTLAVV GTGGAYGYKTYISSSRTGEPPIIRADNSPTKIMAQQDTTPKVPDRLLGNDGGEKLVSREEAPMDLNTTRSGSPRVVFPQM NQNGGTPPAAAPSVTPAQIANANGILPNSDPRPIKTLSVTGGNQGAAADPAAMPPANPPPAKQAKGKKSPANANASAATD TPMPLTSQAAPAAAPARIAAAVPVTEQTSSGTTGGYLVSISSQASEAEAMSSYKAVQDKYGAVLGKYEPIIKRTDLGDKG GVKYRAAVGPFATREEANKMCGTLKTAGGQCFLFSNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54235; Mature: 54104
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRYQDRPFPADGFGRGGNQQADADPLAELARLIGQNDPFAASGRGTPQPQQRPMARPA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC APAPEQAAAGMPPAGAPAWMQRAQPAAANPFADMGREPPQPAPVPPPFPAGFQDPRGQPG CCCCHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC FPEQDFAPAAPRQQPGFPNPEFADQLSKLDYSVGDSRHGFAENDRDYNRDGFDDNGQDSS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH RYDDALFGQMGGDQQGFQGDNDFQDGQYGYQDGYDEGEEEERPRRRGGMSTVLAVLTLAV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH VGTGGAYGYKTYISSSRTGEPPIIRADNSPTKIMAQQDTTPKVPDRLLGNDGGEKLVSRE HCCCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHCCCCHHHHHHCC EAPMDLNTTRSGSPRVVFPQMNQNGGTPPAAAPSVTPAQIANANGILPNSDPRPIKTLSV CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEE TGGNQGAAADPAAMPPANPPPAKQAKGKKSPANANASAATDTPMPLTSQAAPAAAPARIA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHE AAVPVTEQTSSGTTGGYLVSISSQASEAEAMSSYKAVQDKYGAVLGKYEPIIKRTDLGDK EECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC GGVKYRAAVGPFATREEANKMCGTLKTAGGQCFLFSNN CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure ADRYQDRPFPADGFGRGGNQQADADPLAELARLIGQNDPFAASGRGTPQPQQRPMARPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC APAPEQAAAGMPPAGAPAWMQRAQPAAANPFADMGREPPQPAPVPPPFPAGFQDPRGQPG CCCCHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC FPEQDFAPAAPRQQPGFPNPEFADQLSKLDYSVGDSRHGFAENDRDYNRDGFDDNGQDSS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH RYDDALFGQMGGDQQGFQGDNDFQDGQYGYQDGYDEGEEEERPRRRGGMSTVLAVLTLAV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH VGTGGAYGYKTYISSSRTGEPPIIRADNSPTKIMAQQDTTPKVPDRLLGNDGGEKLVSRE HCCCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHCCCCHHHHHHCC EAPMDLNTTRSGSPRVVFPQMNQNGGTPPAAAPSVTPAQIANANGILPNSDPRPIKTLSV CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEE TGGNQGAAADPAAMPPANPPPAKQAKGKKSPANANASAATDTPMPLTSQAAPAAAPARIA CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHE AAVPVTEQTSSGTTGGYLVSISSQASEAEAMSSYKAVQDKYGAVLGKYEPIIKRTDLGDK EECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC GGVKYRAAVGPFATREEANKMCGTLKTAGGQCFLFSNN CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA