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The map label for this gene is pdtaR [H]

Identifier: 146340970

GI number: 146340970

Start: 4230190

End: 4230573

Strand: Direct

Name: pdtaR [H]

Synonym: BRADO4041

Alternate gene names: 146340970

Gene position: 4230190-4230573 (Clockwise)

Preceding gene: 146340967

Following gene: 146340984

Centisome position: 56.73

GC content: 62.5

Gene sequence:

>384_bases
ATGACTGCACCGCGGCCGCCGCGCGGCTCTGTGTTTCTGGTTGAAGACGAAGTCATGATCAGGATGATGGTGGCCGACAT
GCTCGAAGAGCTCGGCTACACCGTCGCCGCAGAGGCCGGCGAAATCGGCGAAGCAATGAAGCTCGCCGAGAGTACCTATT
TCGACGTCGCGATCCTCGACGTCAACGTCAACGGCAAGGTCATCTCGCCGGTGGCTGATGTGATCAAGGGTCGCAACCGG
CCGTTCATCTTCGCCACGGGCTACGGTTCGTCGGGACTGCCGGAAGAGTATCGGGACCGGCCGGCCCTGCAGAAGCCATT
TCAGCTCGAAACGCTCGGCAAAGCCATCGAGCACGCCCTGCGCACCGCCGAGCCCCAGAGCTAG

Upstream 100 bases:

>100_bases
CACGCCGCAGGGTTACGGCATGCAGAGACGACGTTGTTGACGTTGCGCCATAAGCCGTTATTTGCGACCGTCAAACCGGA
TATGGGCAAGGACTGACATC

Downstream 100 bases:

>100_bases
ACTGAAGACAACTCAGGCGAGAATGCTGCCGAGCTTGCCGGAGAAGGCTTCGTCGGTGCGGTCGAGACGCAGCGGGGTCA
CCGAGACGTAATGCGCGGCG

Product: putative response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTAPRPPRGSVFLVEDEVMIRMMVADMLEELGYTVAAEAGEIGEAMKLAESTYFDVAILDVNVNGKVISPVADVIKGRNR
PFIFATGYGSSGLPEEYRDRPALQKPFQLETLGKAIEHALRTAEPQS

Sequences:

>Translated_127_residues
MTAPRPPRGSVFLVEDEVMIRMMVADMLEELGYTVAAEAGEIGEAMKLAESTYFDVAILDVNVNGKVISPVADVIKGRNR
PFIFATGYGSSGLPEEYRDRPALQKPFQLETLGKAIEHALRTAEPQS
>Mature_126_residues
TAPRPPRGSVFLVEDEVMIRMMVADMLEELGYTVAAEAGEIGEAMKLAESTYFDVAILDVNVNGKVISPVADVIKGRNRP
FIFATGYGSSGLPEEYRDRPALQKPFQLETLGKAIEHALRTAEPQS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13900; Mature: 13769

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRPPRGSVFLVEDEVMIRMMVADMLEELGYTVAAEAGEIGEAMKLAESTYFDVAILD
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCEEEEEEEE
VNVNGKVISPVADVIKGRNRPFIFATGYGSSGLPEEYRDRPALQKPFQLETLGKAIEHAL
ECCCCEEEHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
RTAEPQS
HHCCCCC
>Mature Secondary Structure 
TAPRPPRGSVFLVEDEVMIRMMVADMLEELGYTVAAEAGEIGEAMKLAESTYFDVAILD
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCEEEEEEEE
VNVNGKVISPVADVIKGRNRPFIFATGYGSSGLPEEYRDRPALQKPFQLETLGKAIEHAL
ECCCCEEEHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
RTAEPQS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]