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The map label for this gene is 146340961

Identifier: 146340961

GI number: 146340961

Start: 4221890

End: 4222744

Strand: Reverse

Name: 146340961

Synonym: BRADO4032

Alternate gene names: NA

Gene position: 4222744-4221890 (Counterclockwise)

Preceding gene: 146340962

Following gene: 146340953

Centisome position: 56.63

GC content: 66.78

Gene sequence:

>855_bases
ATGAGCGAGCCGAGCGCCTCGAGCGACGCCGCATTCTGCGCGGGCCTAGTCCGCGAACATGATTTCGATCGTTATGCGTC
GACGCTGTTCGTTGCGCCGGAGATCCGGCGGGCGCTGCTGTCGCTCTTTGCCTTCAACATCGAGATCAGCCGTATCCGCG
ACGTCGTCTCCCAGCCGCTGCCGGGCGAGGTGCGATTGCAGTGGTGGCACGATGCGCTGAGCGGGCAGGCGCATGGCGGA
ATCGAAGGCAATCCGGTTGCCGCCGAACTGTTGTCGACGGTACAACGTTTTGCACTTCCGGTGGCGCGGCTGACGCGACT
GATCGACGAGCACCAGTTCGATCTCTACAACGACCCGATGCCGACCATGGCCGCCTTGGACGGTTATCTCGGCGACACGT
GCGGAACAATGTTTGCTCTTGCTGCTCAGATCATGGCGCCGCCGTTCGAGGGCGCTGATCACCTGGCGCATCACGCCGGC
ATTGCACTTGGGCTCCTGCAGGTGATCGCGTCGCTGCCGCGGGATGCCGCGCATCGGCAACTCTATGTTCCGCTCGATCT
GCTCGAGCGGCACGGCGTCCCGCAGGAGGAGGTGTTCGCCGGCAAGGCGACGCCTGCGATCCGGGCCTTGCTGGCGGACC
TGCGCGCGCAGGCCCAACAGCACCTCGATCATACCCTGCAATTGTCGCGCGAGGCGCCGCCGGCAGCGCGGCCAGCGCTG
TTGCCGCTGGCGCTCGTCCGTCGTGATCTGGCGCGCGAAGCGGGCGACCCGTTCCTGCCGCAGCCGCGCTCGCGTCTCGC
GACGCTCTGGACGCTGTGGCGCGCGGCCAGAACGGGGAGCTTTCGCGGTCGTTGA

Upstream 100 bases:

>100_bases
GCGTCGTGCTCGACGCCATGCAGACTGGGCCCGCCATCCGCACCTACAACGTCATGATCGGCGAGCGGCGGCGGGTTGCC
GCCGCGCTCATCGCCGTGCC

Downstream 100 bases:

>100_bases
AGGGGGACGGCCGCGTCAGGCGGTCGGCATGGCGTTCCAAAGCGGCGGGCTGTGCAGCAGTCGCGGCATGTCCGGCGCCT
CGTGCCGGTGGATCGTGCAA

Product: putative phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Phytoene/Squalene Synthetase-Like Protein; Terpenoid Synthase; Squalene; Squalene And Phytoene Synthases Superfamily; Phytoene/Squalene Synthetase; Squalene Synthase HpnD

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPLPGEVRLQWWHDALSGQAHGG
IEGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDPMPTMAALDGYLGDTCGTMFALAAQIMAPPFEGADHLAHHAG
IALGLLQVIASLPRDAAHRQLYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARPAL
LPLALVRRDLAREAGDPFLPQPRSRLATLWTLWRAARTGSFRGR

Sequences:

>Translated_284_residues
MSEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPLPGEVRLQWWHDALSGQAHGG
IEGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDPMPTMAALDGYLGDTCGTMFALAAQIMAPPFEGADHLAHHAG
IALGLLQVIASLPRDAAHRQLYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARPAL
LPLALVRRDLAREAGDPFLPQPRSRLATLWTLWRAARTGSFRGR
>Mature_283_residues
SEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPLPGEVRLQWWHDALSGQAHGGI
EGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDPMPTMAALDGYLGDTCGTMFALAAQIMAPPFEGADHLAHHAGI
ALGLLQVIASLPRDAAHRQLYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARPALL
PLALVRRDLAREAGDPFLPQPRSRLATLWTLWRAARTGSFRGR

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=240, Percent_Identity=28.75, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24641447, Length=245, Percent_Identity=28.9795918367347, Blast_Score=98, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 31170; Mature: 31039

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PGEVRLQWWHDALSGQAHGGIEGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDPM
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTMAALDGYLGDTCGTMFALAAQIMAPPFEGADHLAHHAGIALGLLQVIASLPRDAAHRQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCE
LYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARPAL
EECCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LPLALVRRDLAREAGDPFLPQPRSRLATLWTLWRAARTGSFRGR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEPSASSDAAFCAGLVREHDFDRYASTLFVAPEIRRALLSLFAFNIEISRIRDVVSQPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PGEVRLQWWHDALSGQAHGGIEGNPVAAELLSTVQRFALPVARLTRLIDEHQFDLYNDPM
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PTMAALDGYLGDTCGTMFALAAQIMAPPFEGADHLAHHAGIALGLLQVIASLPRDAAHRQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCE
LYVPLDLLERHGVPQEEVFAGKATPAIRALLADLRAQAQQHLDHTLQLSREAPPAARPAL
EECCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LPLALVRRDLAREAGDPFLPQPRSRLATLWTLWRAARTGSFRGR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA