Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340947
Identifier: 146340947
GI number: 146340947
Start: 4212354
End: 4212878
Strand: Direct
Name: 146340947
Synonym: BRADO4018
Alternate gene names: NA
Gene position: 4212354-4212878 (Clockwise)
Preceding gene: 146340940
Following gene: 146340948
Centisome position: 56.49
GC content: 64.57
Gene sequence:
>525_bases GTGCTTCTCGGCCTCGCCGGCGTGCTCGCCACGTCCCAGCTGCACGCGCAGACCACGGCCGCCAACGAGCCCGCCGGCAT CATGACCGCGATCTACACCCGCGTCGCCAAGGGCAAGGGCGAGGACGGCGGCAACTTCGTCATTGGAGACAAGGCGGCGC GCGCAAAATACCTGTCGAAGGCGCTGGCCGCCCAATGGGCCAAGATGGATGCCCGCACGCCCAAGGGCGAAGTCGGCGCG GTCGATTTCGATCCGATCACCAATTCGCAGGATCCGGATGTCGCCTCGTTCAAGGTGGTTTCGGAGACGCAGGAGGCCGA CAAGGCGACCATCGCCGTCACCATCACCGGCCATCGGCTGGAGCGCAAGGAACAGGCCGACAACGTCATTCGTTACGACT TCGCGCGCGATGCCCGCCAATGGAAGATCGACGACATCCGCGGCGCCATCGACGGCAAGCCGTGGTCGATCCGCGACATG CTGGCCGAGTTCATCAAGCTCACCGACAAATCGAAACGAAGGTAG
Upstream 100 bases:
>100_bases ATGCCGAGCCCGTGCGACAAACCCGTGCCGGCTGCGCATTCCCTGCATGTCACCGCGCGCCAAATCTGATTTGAGGACAC CTATGATCGATCGTCGCTTC
Downstream 100 bases:
>100_bases CGCCCAAGAGGAGTGACCATGACCGCCGTTCGCGACAACAAGGCCGAGAGCCGCTTCGAGCTCGACGTCGAAGGCAGCCT CGCCTTCGCCAATTATCGCG
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM LAEFIKLTDKSKRR
Sequences:
>Translated_174_residues MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM LAEFIKLTDKSKRR >Mature_174_residues MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSKALAAQWAKMDARTPKGEVGA VDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRLERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDM LAEFIKLTDKSKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19005; Mature: 19005
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSK CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH ALAAQWAKMDARTPKGEVGAVDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRL HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHEEEHHHHCCCCCEEEEEEEECCHH ERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDMLAEFIKLTDKSKRR HHHHHHCCEEEHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLGLAGVLATSQLHAQTTAANEPAGIMTAIYTRVAKGKGEDGGNFVIGDKAARAKYLSK CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH ALAAQWAKMDARTPKGEVGAVDFDPITNSQDPDVASFKVVSETQEADKATIAVTITGHRL HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHEEEHHHHCCCCCEEEEEEEECCHH ERKEQADNVIRYDFARDARQWKIDDIRGAIDGKPWSIRDMLAEFIKLTDKSKRR HHHHHHCCEEEHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA