Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340944
Identifier: 146340944
GI number: 146340944
Start: 4208558
End: 4209328
Strand: Reverse
Name: 146340944
Synonym: BRADO4015
Alternate gene names: NA
Gene position: 4209328-4208558 (Counterclockwise)
Preceding gene: 146340945
Following gene: 146340943
Centisome position: 56.45
GC content: 64.98
Gene sequence:
>771_bases ATGGCCAGGAAGCAGCGCGAGATCAGGCTGCGCGCACCCTATCTGAAGCGACTGTGGCTCGATCCCGCCAAGATCACCGA CCGCGCCGCCTATCCGTTCTGCCTGTCGTTCCTGCACGACGAGTTCGAGCTCGGCTTCACGAGCGCCATCACCATCATCG TCGGCGAGAACGGCACCGGCAAATCGACCCTGCTCGAAGGCATCGCCGCACTCGCCGGCTATGACGAGGCCGGCGGCGGC AAGGGGTACATGCCGGTCGATCATGGCCGCGCGATTGAGCGCATGGGTGGCGCGTTGGGAAAGGCCCTTCGTGCGGCGTG GCTGCCCAAGATCACCAAAGGCTGGTTCTTCCGCGCCGAGAGCTTCTTCTCGGTGGCGCGCTATCTCGATGAAGCCGCGC TGGACGATCCGCTCGGCGGGCCGCCGCCCGACTTCCTGTCGCATTCCCATGGCGAGGGCTTCCTGCGCTTCTTCGAGGAG CGCTGCCAGCGCCAAGGCCTCTACATCTTCGACGAGCCGGAATCGGCGCTGTCTCCGGCGCGGCAGATCGAGTTTCTGAA GCTCATGCGGCGGATGGATGAGGCCAGTCATTGTCAGGTGCTGATGGCGACGCATTCGCCCGTCCTGATGGCCTATCCCG GCGCAACCCTGCTGCGGCTGACGAAATACGGCCTCGAGCCCGTGCGCGTGCAGGACACCGATCATTTCAAGGCGCTGCGC GAGTTCTGCAACGATCCGGACGGGTTCGTGCAGGGTGTGTTGGCGGAGTGA
Upstream 100 bases:
>100_bases GCTGGTGTTGGAGGTCGTGGCCTGACAAGGTCGCGCCGATGGCCGGCTCGGCCGCAATGTGCAACATTGTATTGGTTGTC AGCAAGGTTGTGAAAGCGTC
Downstream 100 bases:
>100_bases GGGTTAGGGATCGCCGTGGCCAGCCTGCATTGCTTCGCCCAGCCAGAAACCACAACAAAGCTGTCATCGCCCGGCTTGAC CGGGCGATCCAGTACGCCGC
Product: putative ATP-binding protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; SMC Protein-Like Protein; ABC Transport System ATPase Component; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MARKQREIRLRAPYLKRLWLDPAKITDRAAYPFCLSFLHDEFELGFTSAITIIVGENGTGKSTLLEGIAALAGYDEAGGG KGYMPVDHGRAIERMGGALGKALRAAWLPKITKGWFFRAESFFSVARYLDEAALDDPLGGPPPDFLSHSHGEGFLRFFEE RCQRQGLYIFDEPESALSPARQIEFLKLMRRMDEASHCQVLMATHSPVLMAYPGATLLRLTKYGLEPVRVQDTDHFKALR EFCNDPDGFVQGVLAE
Sequences:
>Translated_256_residues MARKQREIRLRAPYLKRLWLDPAKITDRAAYPFCLSFLHDEFELGFTSAITIIVGENGTGKSTLLEGIAALAGYDEAGGG KGYMPVDHGRAIERMGGALGKALRAAWLPKITKGWFFRAESFFSVARYLDEAALDDPLGGPPPDFLSHSHGEGFLRFFEE RCQRQGLYIFDEPESALSPARQIEFLKLMRRMDEASHCQVLMATHSPVLMAYPGATLLRLTKYGLEPVRVQDTDHFKALR EFCNDPDGFVQGVLAE >Mature_255_residues ARKQREIRLRAPYLKRLWLDPAKITDRAAYPFCLSFLHDEFELGFTSAITIIVGENGTGKSTLLEGIAALAGYDEAGGGK GYMPVDHGRAIERMGGALGKALRAAWLPKITKGWFFRAESFFSVARYLDEAALDDPLGGPPPDFLSHSHGEGFLRFFEER CQRQGLYIFDEPESALSPARQIEFLKLMRRMDEASHCQVLMATHSPVLMAYPGATLLRLTKYGLEPVRVQDTDHFKALRE FCNDPDGFVQGVLAE
Specific function: Unknown
COG id: COG3910
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28646; Mature: 28515
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKQREIRLRAPYLKRLWLDPAKITDRAAYPFCLSFLHDEFELGFTSAITIIVGENGTG CCCCCCHHEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC KSTLLEGIAALAGYDEAGGGKGYMPVDHGRAIERMGGALGKALRAAWLPKITKGWFFRAE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFFSVARYLDEAALDDPLGGPPPDFLSHSHGEGFLRFFEERCQRQGLYIFDEPESALSPA HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHCHH RQIEFLKLMRRMDEASHCQVLMATHSPVLMAYPGATLLRLTKYGLEPVRVQDTDHFKALR HHHHHHHHHHHHCCHHHCEEEEECCCCEEEECCCHHHHHHHHHCCCCEEECCCHHHHHHH EFCNDPDGFVQGVLAE HHHCCHHHHHHHHCCC >Mature Secondary Structure ARKQREIRLRAPYLKRLWLDPAKITDRAAYPFCLSFLHDEFELGFTSAITIIVGENGTG CCCCCHHEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC KSTLLEGIAALAGYDEAGGGKGYMPVDHGRAIERMGGALGKALRAAWLPKITKGWFFRAE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFFSVARYLDEAALDDPLGGPPPDFLSHSHGEGFLRFFEERCQRQGLYIFDEPESALSPA HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHCHH RQIEFLKLMRRMDEASHCQVLMATHSPVLMAYPGATLLRLTKYGLEPVRVQDTDHFKALR HHHHHHHHHHHHCCHHHCEEEEECCCCEEEECCCHHHHHHHHHCCCCEEECCCHHHHHHH EFCNDPDGFVQGVLAE HHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA