Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340942
Identifier: 146340942
GI number: 146340942
Start: 4206360
End: 4206929
Strand: Reverse
Name: 146340942
Synonym: BRADO4013
Alternate gene names: NA
Gene position: 4206929-4206360 (Counterclockwise)
Preceding gene: 146340943
Following gene: 146340941
Centisome position: 56.42
GC content: 65.79
Gene sequence:
>570_bases ATGAGGATGGTGTTCGGCAAGTCGCTGACCCCTGTGGCGGCGCTCGCGATCGTGACGACGGCCCTGACGATCACGGCCCT GACCACGGCGGATGCGCATGGGCCCACCCGGCGCAAGGTGCAGGAGCATGTCGAGATCAACGCCGCGCCCGCGAAGGTGT GGGCGGTCATGGGCAATTTTCAGGACATGAGCTGGCTCGGCGTCGTCGACAAGACCGCGGGCGACAAGGGCAACGAGATC GGCGCGACCCGCAAGCTGACCCTGAAGGGCGGCGCGACCGTCGACGAGGAGCTGTACAAATACGACGCCGAGAAGATGAG CTACTCGTACCGCATCACGGCTGTCGACGTGAAGGTGCTGCCGGTGACGAACTACTCGTCGACCATCGCGGTGACGCCGA GCGCCGACGGCAAGGGCAGCGTCGTCGAATGGACCGGCGCCTTCTACCGCGGCTTCCCCAACAATGATCCTCCGCCGGAG CTCAGCGACGAGGCGGCCGTGAACGCGGTGACCGGATTGTACAAGGGCGGGCTCGAGGGGCTGAAGACGAAGGTGGAGAG CGGAAGCTGA
Upstream 100 bases:
>100_bases CCACGACGCCGTCTTTTTTGTTGCAACAATCCGGAGCGGTGCAAAGATGACGCCGCCGAGCGCAGATGTGCCGGCCAATG AAAGAGACCGAGGAAACGAG
Downstream 100 bases:
>100_bases TCGGAGTGACCATGTTGCTCCAGGCGCAGGGCGCTCCCTCTGCCCGTTGTTACGGCGAGAGGGAGCCGACCGTCGATGAC ATGCCATCTCGGCTCCAGCG
Product: putative signal peptide
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Signal Peptide; Bet V I Allergen
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE LSDEAAVNAVTGLYKGGLEGLKTKVESGS
Sequences:
>Translated_189_residues MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE LSDEAAVNAVTGLYKGGLEGLKTKVESGS >Mature_189_residues MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNFQDMSWLGVVDKTAGDKGNEI GATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVLPVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPE LSDEAAVNAVTGLYKGGLEGLKTKVESGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20072; Mature: 20072
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNF CCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCHHEEEEECCCC QDMSWLGVVDKTAGDKGNEIGATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVL CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEEEEE PVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEG EECCCCCEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH LKTKVESGS HHHHCCCCC >Mature Secondary Structure MRMVFGKSLTPVAALAIVTTALTITALTTADAHGPTRRKVQEHVEINAAPAKVWAVMGNF CCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCHHEEEEECCCC QDMSWLGVVDKTAGDKGNEIGATRKLTLKGGATVDEELYKYDAEKMSYSYRITAVDVKVL CCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEEEEE PVTNYSSTIAVTPSADGKGSVVEWTGAFYRGFPNNDPPPELSDEAAVNAVTGLYKGGLEG EECCCCCEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH LKTKVESGS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA