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The map label for this gene is ropB [H]

Identifier: 146340936

GI number: 146340936

Start: 4198730

End: 4199383

Strand: Direct

Name: ropB [H]

Synonym: BRADO4007

Alternate gene names: 146340936

Gene position: 4198730-4199383 (Clockwise)

Preceding gene: 146340935

Following gene: 146340939

Centisome position: 56.31

GC content: 66.36

Gene sequence:

>654_bases
ATGAAGAAGATCCTGCTTGCGACCGTGGCCCTGGCCGCCCTGGCCGCTCCCGCCGCCGCTGCCGATCTTGCCGCGCGTCC
GACCTACACCAAGGCGCCGGTTCTCGCGCCTGTGCCGACTTGGGCCGGCTTCTACCTCGGTGCCTTCGGCGGCTATGCGA
CCACAGATAATGGCGGCGTGCTGAGCCCGAAGGGCGGCTTCGCCGGTGGCACCATCGGCTACAACTGGCAGTCCGGCGCG
TGGGTTTACGGCCTTGAGGCCGATGCAGCCTGGGCCGACATCAAGGACTCCGTTGGTGGCGTCGTTCCGGGCTTCGGCGC
CGTCGGCATCGCCAGCAAGATCGACGCGACCGGCACCGCCCGTGGCCGGGTTGGTTACGCGTTCAACAACGTTCTGCTGT
ACGGCACCGGCGGTTACGCCTGGGCGAACAACAAGATCACGCTCTCGGCGCTCGGCGTCGGCGTCTCCGACACGCAGTTC
CTGAGCGGCTGGACCGCTGGCGGCGGCGTCGAGGTGCTGTTCGCTCCGAAGTGGTCGGTGAAGGCCGAGTACCTCTACAA
GAGCTTCGACGGCAAGACCTACTTCGGCGGCGCTCTTCCGACCGGCAACCTGAACCTGCACAGCGTTCAGGTCGGCGTGA
ACTATCACTTCTAA

Upstream 100 bases:

>100_bases
CCCGGCTATAGGATGACCCGTCAACTTGAACGGGTGAGTCTGTTTCGTGCGTACGAGCTTCGGTGCGACGCGGACTTCAA
GGACTAAACTGGAGACAAGA

Downstream 100 bases:

>100_bases
GACTTCGGCTTCCGGGCCAACGCACAGGCCTCCGCTCGCAAGGGCGGAGGCTTTTCTTTTTGACCGCCGCGACGGGGCTT
CTTCGTTCTCCGGCCGCGCC

Product: putative outer-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKILLATVALAALAAPAAAADLAARPTYTKAPVLAPVPTWAGFYLGAFGGYATTDNGGVLSPKGGFAGGTIGYNWQSGA
WVYGLEADAAWADIKDSVGGVVPGFGAVGIASKIDATGTARGRVGYAFNNVLLYGTGGYAWANNKITLSALGVGVSDTQF
LSGWTAGGGVEVLFAPKWSVKAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF

Sequences:

>Translated_217_residues
MKKILLATVALAALAAPAAAADLAARPTYTKAPVLAPVPTWAGFYLGAFGGYATTDNGGVLSPKGGFAGGTIGYNWQSGA
WVYGLEADAAWADIKDSVGGVVPGFGAVGIASKIDATGTARGRVGYAFNNVLLYGTGGYAWANNKITLSALGVGVSDTQF
LSGWTAGGGVEVLFAPKWSVKAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF
>Mature_217_residues
MKKILLATVALAALAAPAAAADLAARPTYTKAPVLAPVPTWAGFYLGAFGGYATTDNGGVLSPKGGFAGGTIGYNWQSGA
WVYGLEADAAWADIKDSVGGVVPGFGAVGIASKIDATGTARGRVGYAFNNVLLYGTGGYAWANNKITLSALGVGVSDTQF
LSGWTAGGGVEVLFAPKWSVKAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 22213; Mature: 22213

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLATVALAALAAPAAAADLAARPTYTKAPVLAPVPTWAGFYLGAFGGYATTDNGGV
CCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCE
LSPKGGFAGGTIGYNWQSGAWVYGLEADAAWADIKDSVGGVVPGFGAVGIASKIDATGTA
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RGRVGYAFNNVLLYGTGGYAWANNKITLSALGVGVSDTQFLSGWTAGGGVEVLFAPKWSV
CCEEEEEECCEEEEECCCEEEECCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEECCCCC
KAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF
EEEEEEEECCCCEEECCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKKILLATVALAALAAPAAAADLAARPTYTKAPVLAPVPTWAGFYLGAFGGYATTDNGGV
CCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHCCCCEECCCCCE
LSPKGGFAGGTIGYNWQSGAWVYGLEADAAWADIKDSVGGVVPGFGAVGIASKIDATGTA
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RGRVGYAFNNVLLYGTGGYAWANNKITLSALGVGVSDTQFLSGWTAGGGVEVLFAPKWSV
CCEEEEEECCEEEEECCCEEEECCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEECCCCC
KAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF
EEEEEEEECCCCEEECCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8589412 [H]