Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cysK [H]
Identifier: 146340917
GI number: 146340917
Start: 4179251
End: 4180219
Strand: Reverse
Name: cysK [H]
Synonym: BRADO3987
Alternate gene names: 146340917
Gene position: 4180219-4179251 (Counterclockwise)
Preceding gene: 146340919
Following gene: 146340916
Centisome position: 56.06
GC content: 65.12
Gene sequence:
>969_bases ATGGAGTCGTCGGCTGCGACACAGCGTCCCGGACGCGGGCGCGTATTTGATTCAATTATCGAGGCATTCGGCAATACGCC GATTGTGCGGCTGCGAAAGTTGCCGGAGCAGCATGGCGTCAAGGCGACCATCCTCGCCAAGCTGGAATACTTCAATCCTG CCGCGAGCGTGAAGGACCGCATTGGCGTCGGCATGATCCTGGCGATGGAGCAGGCCGGTGTGCTCAAGCCGGACTCCGTT CTGATCGAGCCGACCTCGGGCAATACCGGCATTGCGCTCGCCTTCGTCGCGGCGGCGCGCGGCTACAAGCTGAAGCTTGT CATGCCGGAGTCGATGTCGGTGGAGCGGCGCAAGATGCTTGCCTTCCTCGGCGCCGAGATCGTGCTGACACCGGCGGCGC AGGGCATGAAGGGCGCGATCGCGACCGCCGAGGAGCTGTTGCGAACCACGCCGAACTCGGTGATGCCGCAGCAGTTCAAG AACCTCGCCAATCCGGAGATCCATCGCCGCACGACGGCGGAGGAGATCTGGAACGACACCGCGGGGAATATCGACCTGTT CGTCGCCGGCGTCGGTACCGGAGGCACCATTACCGGCGTCGGCCAGGTGCTGAAGTCGCGCAAACCCGGACTCAAGGTGG TTGCTGTCGAGCCGGAGGAGAGCCCGGTCCTGTCGGGCGGCCAGCATTCGCCGCACAAGATCCAGGGCATCGGCGCCGGC TTCGTCCCGGATATTCTCGACCGGTCCGTGATCGACGAGATCGTCAAGATCAACAGCGCCACGGCCATCGAGACCTCGCG CGCGCTGGCGCGCAACGAGGGCATTCCCGGCGGCATTTCCTCGGGCGCGGCGATCGCGGCGGCGATCGAGCTCGGCAAGC GGCCGGAGAATGCCGGCAAGACGATCCTGGCGATCGTCCCGTCGTTCTCCGAGCGCTATCTCTCCACGGCGCTGTTCGAA GGGATCTGA
Upstream 100 bases:
>100_bases CGATGATCATGCAGACGCGTAATCGTGCTTGCGCAGCGCAATAAGCTCGCTGAAAATGGTCAGGAACATTGTCGCGCAAA AGTGCGCAAGGAGTGATCTC
Downstream 100 bases:
>100_bases TCATGGCCGATCAGCCGCGACGTCCCCGCACGCTCGCCGACGCTCGCACCGAGGCGGAGGCTGCATTCAAGAAGGTGACC ACCAAGCCGGTGGAGGCGCC
Product: O-acetylserine sulfhydrolase A
Products: NA
Alternate protein names: OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MESSAATQRPGRGRVFDSIIEAFGNTPIVRLRKLPEQHGVKATILAKLEYFNPAASVKDRIGVGMILAMEQAGVLKPDSV LIEPTSGNTGIALAFVAAARGYKLKLVMPESMSVERRKMLAFLGAEIVLTPAAQGMKGAIATAEELLRTTPNSVMPQQFK NLANPEIHRRTTAEEIWNDTAGNIDLFVAGVGTGGTITGVGQVLKSRKPGLKVVAVEPEESPVLSGGQHSPHKIQGIGAG FVPDILDRSVIDEIVKINSATAIETSRALARNEGIPGGISSGAAIAAAIELGKRPENAGKTILAIVPSFSERYLSTALFE GI
Sequences:
>Translated_322_residues MESSAATQRPGRGRVFDSIIEAFGNTPIVRLRKLPEQHGVKATILAKLEYFNPAASVKDRIGVGMILAMEQAGVLKPDSV LIEPTSGNTGIALAFVAAARGYKLKLVMPESMSVERRKMLAFLGAEIVLTPAAQGMKGAIATAEELLRTTPNSVMPQQFK NLANPEIHRRTTAEEIWNDTAGNIDLFVAGVGTGGTITGVGQVLKSRKPGLKVVAVEPEESPVLSGGQHSPHKIQGIGAG FVPDILDRSVIDEIVKINSATAIETSRALARNEGIPGGISSGAAIAAAIELGKRPENAGKTILAIVPSFSERYLSTALFE GI >Mature_322_residues MESSAATQRPGRGRVFDSIIEAFGNTPIVRLRKLPEQHGVKATILAKLEYFNPAASVKDRIGVGMILAMEQAGVLKPDSV LIEPTSGNTGIALAFVAAARGYKLKLVMPESMSVERRKMLAFLGAEIVLTPAAQGMKGAIATAEELLRTTPNSVMPQQFK NLANPEIHRRTTAEEIWNDTAGNIDLFVAGVGTGGTITGVGQVLKSRKPGLKVVAVEPEESPVLSGGQHSPHKIQGIGAG FVPDILDRSVIDEIVKINSATAIETSRALARNEGIPGGISSGAAIAAAIELGKRPENAGKTILAIVPSFSERYLSTALFE GI
Specific function: Catalyzes the conversion of O-acetylserine (OAS) to cysteine through the elimination of acetate and addition of hydrogen sulfide [H]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=313, Percent_Identity=39.9361022364217, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI295821200, Length=313, Percent_Identity=39.9361022364217, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI4557415, Length=313, Percent_Identity=39.9361022364217, Blast_Score=236, Evalue=2e-62, Organism=Escherichia coli, GI1788754, Length=315, Percent_Identity=53.6507936507937, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI2367138, Length=304, Percent_Identity=40.4605263157895, Blast_Score=219, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17535051, Length=300, Percent_Identity=53.3333333333333, Blast_Score=317, Evalue=7e-87, Organism=Caenorhabditis elegans, GI17562970, Length=303, Percent_Identity=50.4950495049505, Blast_Score=294, Evalue=5e-80, Organism=Caenorhabditis elegans, GI32566674, Length=295, Percent_Identity=51.5254237288136, Blast_Score=289, Evalue=1e-78, Organism=Caenorhabditis elegans, GI115535073, Length=301, Percent_Identity=53.156146179402, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17561720, Length=300, Percent_Identity=49, Blast_Score=256, Evalue=9e-69, Organism=Caenorhabditis elegans, GI32566672, Length=215, Percent_Identity=50.6976744186047, Blast_Score=217, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17534315, Length=330, Percent_Identity=39.3939393939394, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI25147552, Length=323, Percent_Identity=38.390092879257, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17561716, Length=118, Percent_Identity=50, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321594, Length=315, Percent_Identity=38.7301587301587, Blast_Score=205, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321449, Length=338, Percent_Identity=35.207100591716, Blast_Score=130, Evalue=3e-31, Organism=Drosophila melanogaster, GI24643623, Length=312, Percent_Identity=38.4615384615385, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI20129101, Length=312, Percent_Identity=38.4615384615385, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 33922; Mature: 33922
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSAATQRPGRGRVFDSIIEAFGNTPIVRLRKLPEQHGVKATILAKLEYFNPAASVKDR CCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHCCEEEEEEEEHHCCCHHHHHHH IGVGMILAMEQAGVLKPDSVLIEPTSGNTGIALAFVAAARGYKLKLVMPESMSVERRKML CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHEEHHCCCCEEEEECCCCCCHHHHHHH AFLGAEIVLTPAAQGMKGAIATAEELLRTTPNSVMPQQFKNLANPEIHRRTTAEEIWNDT HHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCC AGNIDLFVAGVGTGGTITGVGQVLKSRKPGLKVVAVEPEESPVLSGGQHSPHKIQGIGAG CCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCC FVPDILDRSVIDEIVKINSATAIETSRALARNEGIPGGISSGAAIAAAIELGKRPENAGK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC TILAIVPSFSERYLSTALFEGI EEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MESSAATQRPGRGRVFDSIIEAFGNTPIVRLRKLPEQHGVKATILAKLEYFNPAASVKDR CCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHCCEEEEEEEEHHCCCHHHHHHH IGVGMILAMEQAGVLKPDSVLIEPTSGNTGIALAFVAAARGYKLKLVMPESMSVERRKML CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHEEHHCCCCEEEEECCCCCCHHHHHHH AFLGAEIVLTPAAQGMKGAIATAEELLRTTPNSVMPQQFKNLANPEIHRRTTAEEIWNDT HHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCC AGNIDLFVAGVGTGGTITGVGQVLKSRKPGLKVVAVEPEESPVLSGGQHSPHKIQGIGAG CCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCC FVPDILDRSVIDEIVKINSATAIETSRALARNEGIPGGISSGAAIAAAIELGKRPENAGK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC TILAIVPSFSERYLSTALFEGI EEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]