Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is sam [H]
Identifier: 146340909
GI number: 146340909
Start: 4169882
End: 4170772
Strand: Direct
Name: sam [H]
Synonym: BRADO3978
Alternate gene names: 146340909
Gene position: 4169882-4170772 (Clockwise)
Preceding gene: 146340907
Following gene: 146340910
Centisome position: 55.92
GC content: 66.55
Gene sequence:
>891_bases ATGAATCGCCCCGCTTCAAAATTGATGGCCGCACTCTGGATGACCGGCTGGCTCAGCCTCATGCTGGTGATGGCCGTGGC CGGTCGCGAGGCCATGCGCGAGCTCAACGTCTTCGAGCTGATGGAGCTGCGATGCCTCATCGGCCTGGTGATGCTGTCGC CGGTGATCGCGCTCAGCGGCGGGATAGCCACGCTGCGCACGACGCGGCTCAAGCAGCACGCCGCCCGCAACCTGATCCAT TACGGCGCGCAGCTCGGCTGGTTCTTCGCGCTGACCCTGATCCCGATCGGCCAGGTGGTCGCGATCGAGTTCACGATGCC GATCTGGACCGCCCTGCTCGCTGCCACGTTCCTTGGCGAGCGCATCACCTTGTTCAAGCTCGCGGCGATCGTTCTCGGCC TGGTCGGCGTCGTGGTGATCGTGCGCCCGGACACGGGCGCGATCAACCCGGGCCAGCTGATTGCGCTGGCGGCCGCCGTC GGCTTCGGCATCTCGATCGCGCTGGTCAAGTTCCTGACGCGCTCCGAGCCGACCGTCTCGATCATCTTCTGGATGCTGGC GGTGCAAGCGGTGGCCGGCGCGGTTCCAACCTTGCTGCTGTGGACGCCGCCGTCGGCCGCGGCCTGGGGCTGGATCCTGC TGGTCGCCCTCTGCGGCACCTTCTCGCATTTCTGCATGGCGCGCGCGATGCTCTATGCCGACGCCACGATCGTCATCCCG ATGGACTTCCTGCGCGTGCCCTTGACCGCGACTGTCGGCTGGCTGGTCTATTCGGAGCGCCTCGACAGTTTCACCGTGCT GGGCGCCGCGCTGATTCTCGCCGGCAATCTGTTGAACCTCCGGCCCCCGCAGCCGCAACCGGTGGCTATCAAGGCGTCAT CGCAAGGCTGA
Upstream 100 bases:
>100_bases ATAAGCAGCGCGCGTTGATGCACTGCACCGTTGATTTCATTTGCAATGCCCTGCACGCGAGGTGATACAGCCGCTCCGCC TGCCCCGCATCTTCCGCCCC
Downstream 100 bases:
>100_bases GCCGGTCCTCGGCGAGACTCCCTTACCCCCGGAATGTGACACTCGTCACGCAACCGTTGGTATACGTGCAGCGAGCGTTG GCTTCGCGCAACACTCCCGA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNRPASKLMAALWMTGWLSLMLVMAVAGREAMRELNVFELMELRCLIGLVMLSPVIALSGGIATLRTTRLKQHAARNLIH YGAQLGWFFALTLIPIGQVVAIEFTMPIWTALLAATFLGERITLFKLAAIVLGLVGVVVIVRPDTGAINPGQLIALAAAV GFGISIALVKFLTRSEPTVSIIFWMLAVQAVAGAVPTLLLWTPPSAAAWGWILLVALCGTFSHFCMARAMLYADATIVIP MDFLRVPLTATVGWLVYSERLDSFTVLGAALILAGNLLNLRPPQPQPVAIKASSQG
Sequences:
>Translated_296_residues MNRPASKLMAALWMTGWLSLMLVMAVAGREAMRELNVFELMELRCLIGLVMLSPVIALSGGIATLRTTRLKQHAARNLIH YGAQLGWFFALTLIPIGQVVAIEFTMPIWTALLAATFLGERITLFKLAAIVLGLVGVVVIVRPDTGAINPGQLIALAAAV GFGISIALVKFLTRSEPTVSIIFWMLAVQAVAGAVPTLLLWTPPSAAAWGWILLVALCGTFSHFCMARAMLYADATIVIP MDFLRVPLTATVGWLVYSERLDSFTVLGAALILAGNLLNLRPPQPQPVAIKASSQG >Mature_296_residues MNRPASKLMAALWMTGWLSLMLVMAVAGREAMRELNVFELMELRCLIGLVMLSPVIALSGGIATLRTTRLKQHAARNLIH YGAQLGWFFALTLIPIGQVVAIEFTMPIWTALLAATFLGERITLFKLAAIVLGLVGVVVIVRPDTGAINPGQLIALAAAV GFGISIALVKFLTRSEPTVSIIFWMLAVQAVAGAVPTLLLWTPPSAAAWGWILLVALCGTFSHFCMARAMLYADATIVIP MDFLRVPLTATVGWLVYSERLDSFTVLGAALILAGNLLNLRPPQPQPVAIKASSQG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31787; Mature: 31787
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPASKLMAALWMTGWLSLMLVMAVAGREAMRELNVFELMELRCLIGLVMLSPVIALSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC GIATLRTTRLKQHAARNLIHYGAQLGWFFALTLIPIGQVVAIEFTMPIWTALLAATFLGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCC RITLFKLAAIVLGLVGVVVIVRPDTGAINPGQLIALAAAVGFGISIALVKFLTRSEPTVS HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IIFWMLAVQAVAGAVPTLLLWTPPSAAAWGWILLVALCGTFSHFCMARAMLYADATIVIP HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE MDFLRVPLTATVGWLVYSERLDSFTVLGAALILAGNLLNLRPPQPQPVAIKASSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MNRPASKLMAALWMTGWLSLMLVMAVAGREAMRELNVFELMELRCLIGLVMLSPVIALSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC GIATLRTTRLKQHAARNLIHYGAQLGWFFALTLIPIGQVVAIEFTMPIWTALLAATFLGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCC RITLFKLAAIVLGLVGVVVIVRPDTGAINPGQLIALAAAVGFGISIALVKFLTRSEPTVS HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IIFWMLAVQAVAGAVPTLLLWTPPSAAAWGWILLVALCGTFSHFCMARAMLYADATIVIP HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE MDFLRVPLTATVGWLVYSERLDSFTVLGAALILAGNLLNLRPPQPQPVAIKASSQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA