Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340896
Identifier: 146340896
GI number: 146340896
Start: 4145639
End: 4146496
Strand: Direct
Name: 146340896
Synonym: BRADO3962
Alternate gene names: NA
Gene position: 4145639-4146496 (Clockwise)
Preceding gene: 146340894
Following gene: 146340899
Centisome position: 55.6
GC content: 65.5
Gene sequence:
>858_bases GTGGCCCTCAAGAATGTCATCGGTATCGATCACGCCGTGGTCGTGGTGAAGGAGCTCGACGCGGCCGCCGAGACCTGGAA GCGGCTCGGCTTCACGCTGTCGCCGCGCGGCACGCACAGCGCCAAGATGGGATCGGGCAATTACACCATCATGCTCGATC CGGACTACATCGAGCTGCTCGGCATTCTCGCCGAGACGGACCACAATGTCCCGACCCGCAACTTCCTCGCCCAGCGCGGC GAAGGCATCGAGCGCATCGCGTTCACGGCGATCGATTCCGCCGCAGGTGCCGAGGAGATTCGCGCGAAGGGATTCGAGCC GATCGGACCGATCGACTTCGAGCGCCCGGTACCGTTGCCGGACGGCACGCTGTCAGCGGCAAAATTCCGTGTGTTCCAAT GGCCCGTCGTGGAGGCGCCCGGCGGATTGCGCATCTTTGCCTGCCAGCACAAGACGCGTGAGACGGTCTGGATCCCGGAA CTGATGAGCCACGCCAACGCGGCAAAGCAATTGAAACAGGCGCTGATCGTCACGCCGGATACGGCCAAGGATGCGGCGCA TCTGTCGCGCCTGATCGATCGCGAGGGACTTCGCGAAGCCGATGGCGCAGTGGCGGTCGCATCCGGCGGCGACCGCGCCG ATTTCGTCTTCCTGACCCGGGATCAACTGGCCGCGCGCTATCCCGGCGTTTCACTTGCCGGTCTGCCAGAGCGCGGTGGC GCCGGCCTCGTGCTGGCCTCACATGATCTGGCCAAGACCGAAAAGGCTTTGGATAGAGCGGCTGTGCGCAGCGGATCGAG CCTCGTCGTGCCGCCGGCCTCGGCCACGGGCAACCTGCTCGCCTTCGTCGCCGGTTAG
Upstream 100 bases:
>100_bases GCCTTGCATCCCTCGCCCGGCCACGCCGGTTGCGGCGCATGGGTCGATTGGGCATAGTTCGGCCGCCAATATGCCAAGTT CGCTGCAAGGAGACAAACGC
Downstream 100 bases:
>100_bases CCGGGAAGTTGTTGCGGCCGCGAGCTCCGCGGCCGCGGCGTTCTCATTCTGCCGGCTGGAACATCGCCGGACGACCGCGC TGGCTGTCGAGCCAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MALKNVIGIDHAVVVVKELDAAAETWKRLGFTLSPRGTHSAKMGSGNYTIMLDPDYIELLGILAETDHNVPTRNFLAQRG EGIERIAFTAIDSAAGAEEIRAKGFEPIGPIDFERPVPLPDGTLSAAKFRVFQWPVVEAPGGLRIFACQHKTRETVWIPE LMSHANAAKQLKQALIVTPDTAKDAAHLSRLIDREGLREADGAVAVASGGDRADFVFLTRDQLAARYPGVSLAGLPERGG AGLVLASHDLAKTEKALDRAAVRSGSSLVVPPASATGNLLAFVAG
Sequences:
>Translated_285_residues MALKNVIGIDHAVVVVKELDAAAETWKRLGFTLSPRGTHSAKMGSGNYTIMLDPDYIELLGILAETDHNVPTRNFLAQRG EGIERIAFTAIDSAAGAEEIRAKGFEPIGPIDFERPVPLPDGTLSAAKFRVFQWPVVEAPGGLRIFACQHKTRETVWIPE LMSHANAAKQLKQALIVTPDTAKDAAHLSRLIDREGLREADGAVAVASGGDRADFVFLTRDQLAARYPGVSLAGLPERGG AGLVLASHDLAKTEKALDRAAVRSGSSLVVPPASATGNLLAFVAG >Mature_284_residues ALKNVIGIDHAVVVVKELDAAAETWKRLGFTLSPRGTHSAKMGSGNYTIMLDPDYIELLGILAETDHNVPTRNFLAQRGE GIERIAFTAIDSAAGAEEIRAKGFEPIGPIDFERPVPLPDGTLSAAKFRVFQWPVVEAPGGLRIFACQHKTRETVWIPEL MSHANAAKQLKQALIVTPDTAKDAAHLSRLIDREGLREADGAVAVASGGDRADFVFLTRDQLAARYPGVSLAGLPERGGA GLVLASHDLAKTEKALDRAAVRSGSSLVVPPASATGNLLAFVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30274; Mature: 30143
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKNVIGIDHAVVVVKELDAAAETWKRLGFTLSPRGTHSAKMGSGNYTIMLDPDYIELL CCCCHHHCCCCEEEEEHHHHHHHHHHHHCCCEECCCCCCCCEECCCCEEEEECCCHHHHH GILAETDHNVPTRNFLAQRGEGIERIAFTAIDSAAGAEEIRAKGFEPIGPIDFERPVPLP HHHHHCCCCCCHHHHHHHCCCCHHHEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC DGTLSAAKFRVFQWPVVEAPGGLRIFACQHKTRETVWIPELMSHANAAKQLKQALIVTPD CCCCCHHEEEEEECEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHEEECCC TAKDAAHLSRLIDREGLREADGAVAVASGGDRADFVFLTRDQLAARYPGVSLAGLPERGG CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHCCCCEEECCCCCCC AGLVLASHDLAKTEKALDRAAVRSGSSLVVPPASATGNLLAFVAG CEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC >Mature Secondary Structure ALKNVIGIDHAVVVVKELDAAAETWKRLGFTLSPRGTHSAKMGSGNYTIMLDPDYIELL CCCHHHCCCCEEEEEHHHHHHHHHHHHCCCEECCCCCCCCEECCCCEEEEECCCHHHHH GILAETDHNVPTRNFLAQRGEGIERIAFTAIDSAAGAEEIRAKGFEPIGPIDFERPVPLP HHHHHCCCCCCHHHHHHHCCCCHHHEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC DGTLSAAKFRVFQWPVVEAPGGLRIFACQHKTRETVWIPELMSHANAAKQLKQALIVTPD CCCCCHHEEEEEECEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHEEECCC TAKDAAHLSRLIDREGLREADGAVAVASGGDRADFVFLTRDQLAARYPGVSLAGLPERGG CCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHCCCCEEECCCCCCC AGLVLASHDLAKTEKALDRAAVRSGSSLVVPPASATGNLLAFVAG CEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA