Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146340888
Identifier: 146340888
GI number: 146340888
Start: 4134950
End: 4136431
Strand: Direct
Name: 146340888
Synonym: BRADO3954
Alternate gene names: NA
Gene position: 4134950-4136431 (Clockwise)
Preceding gene: 146340886
Following gene: 146340889
Centisome position: 55.45
GC content: 62.75
Gene sequence:
>1482_bases ATGACTGCCTCCGCCGAGCTGACGGCCGCTCCAGCCGCATCTGATTCCAGATGGTTTAAATTCGCGATCGCTGTCGGCCT CGTCGGACTGGCCGACGCGTTGCTCTACAACGGCCGCCCCATCGGTCTGGCCTTGCCGCTGTTCCTCGGCGTCCTCGCCG CGACGAGCATCTTCGTCAATGTCGTCATGACGTCGCGCGCCCGGCTGATCGGAGCTGGCGTCCTTGTCGTCGCAGGCCTC GCGCCTGTCATCGAGGATCTCAGCCTGCTGTCGTTTGCCGTCATGCTTGTGATGATCCTTTCGGCCGTTGCGTTCGCAAC CGACTCATATGCGCGCGGATTTTGGCTGCCGCTGAGCGCGGCTCGGCAGTTGCTCCTGTTTGGACCATTCCGGCTCGTCC CGGACATGATCATGATACTGCGCGAGCACTCGCTGACGCGCGCACTGCTGATATGGGGCCTCCCGCTAACATTCGGCGCC GTGTTTGCGGCGTTGTTCGCCGCAGCGAACCCGGTCATCGCGCAGTGGCTCGCGATCCTCAGCGCCGATGACTCGGCATC GGAGCTGACAATGATGCGCGCGATCTTCTGGCTCTTGGCGCTGACCATGATATGGCCCTTCGTTCACCTGCGCTGGCGCC AGCGCATCGAGCCTCCGCAACCGGCGGTCGAACCCTCGCCCGGTCAGCCGCTATCCCTGCTCGCGATCGTGCTCGGACCT GCGACCGTGATCCGATCGTTGGTGCTGTTCAACTTGCTGTTTGCGCTTCAGACCGTGCTCGACGGCGCGTATTTGTGGGG ACATGCGGCGCTTCCGGGCGGCGTGACGTACGCGACCTATGCGCACCGGGGAGCCTACCTCCTGATCGTCACAGCCCTGC TCGCTGCCGCTTTCGTCATCGTTGCAAGTCGCAGCGAAAACATCGAAAGCGGATCGCCGCTCGTCCGCCCGCTGATCTAT CTTTGGCTGGCGCAGAACGTGATGCTGGTCCTCTCCTCGATCCAGCGGCTGCACATGTATGTGGAGACCTATGCTCTGAC TTACTGGCGGGTCGCGGCTCTGGTCTGGATGGTCCTTGTTGCCATCGGGCTCGTGCTCATCGTGTTCAGGATCGTGCTCG CCAAGCCGGTGTCATGGCTGATCCGCATGAACCTGCTGATGCTGTCGGTGACACTTTACGCTTGTACGTTCGTCAATCTC GACGCCGCGATTGCCGACTACAACGTCGCCCATAGCCGCGAGGCAGGCCGGAGCGGACCGTCGATCGACAGCGATTACCT GGTCTGGCTTGGGCCACAGGCGCTGCCGGCGCTCGATCGGGCAATGCGGTTGATCCCCACGGATCGGCGGCTGGGGAGCA GCCGTGACCTTCTCCTGCGACAACAGGACATTCAGATGGAAGCCTGGCGCTCATGGAGCTTTCGTGGCTGGCGCTTGCAG CGCTATCTCGATACACATCCTCTGTCGTCGAACCCCAGCTGA
Upstream 100 bases:
>100_bases AAATGCTGCAGGGCTGGTGGGCAGCGGCTGCACGTGGCCGCGCCATGGTGGTCATCGGCCGGCACGTGCCGGCCGCTTCG CTGCCACAAGGGACCACCGC
Downstream 100 bases:
>100_bases TGTCTCGCCGCGGAGCCCAAATCGTGTCCCCCCGAATCCTCATTGTCGACGACGACCCGCATATCCGGGAGGTGGTGCGC GTCGCCTTGAGCAAGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTASAELTAAPAASDSRWFKFAIAVGLVGLADALLYNGRPIGLALPLFLGVLAATSIFVNVVMTSRARLIGAGVLVVAGL APVIEDLSLLSFAVMLVMILSAVAFATDSYARGFWLPLSAARQLLLFGPFRLVPDMIMILREHSLTRALLIWGLPLTFGA VFAALFAAANPVIAQWLAILSADDSASELTMMRAIFWLLALTMIWPFVHLRWRQRIEPPQPAVEPSPGQPLSLLAIVLGP ATVIRSLVLFNLLFALQTVLDGAYLWGHAALPGGVTYATYAHRGAYLLIVTALLAAAFVIVASRSENIESGSPLVRPLIY LWLAQNVMLVLSSIQRLHMYVETYALTYWRVAALVWMVLVAIGLVLIVFRIVLAKPVSWLIRMNLLMLSVTLYACTFVNL DAAIADYNVAHSREAGRSGPSIDSDYLVWLGPQALPALDRAMRLIPTDRRLGSSRDLLLRQQDIQMEAWRSWSFRGWRLQ RYLDTHPLSSNPS
Sequences:
>Translated_493_residues MTASAELTAAPAASDSRWFKFAIAVGLVGLADALLYNGRPIGLALPLFLGVLAATSIFVNVVMTSRARLIGAGVLVVAGL APVIEDLSLLSFAVMLVMILSAVAFATDSYARGFWLPLSAARQLLLFGPFRLVPDMIMILREHSLTRALLIWGLPLTFGA VFAALFAAANPVIAQWLAILSADDSASELTMMRAIFWLLALTMIWPFVHLRWRQRIEPPQPAVEPSPGQPLSLLAIVLGP ATVIRSLVLFNLLFALQTVLDGAYLWGHAALPGGVTYATYAHRGAYLLIVTALLAAAFVIVASRSENIESGSPLVRPLIY LWLAQNVMLVLSSIQRLHMYVETYALTYWRVAALVWMVLVAIGLVLIVFRIVLAKPVSWLIRMNLLMLSVTLYACTFVNL DAAIADYNVAHSREAGRSGPSIDSDYLVWLGPQALPALDRAMRLIPTDRRLGSSRDLLLRQQDIQMEAWRSWSFRGWRLQ RYLDTHPLSSNPS >Mature_492_residues TASAELTAAPAASDSRWFKFAIAVGLVGLADALLYNGRPIGLALPLFLGVLAATSIFVNVVMTSRARLIGAGVLVVAGLA PVIEDLSLLSFAVMLVMILSAVAFATDSYARGFWLPLSAARQLLLFGPFRLVPDMIMILREHSLTRALLIWGLPLTFGAV FAALFAAANPVIAQWLAILSADDSASELTMMRAIFWLLALTMIWPFVHLRWRQRIEPPQPAVEPSPGQPLSLLAIVLGPA TVIRSLVLFNLLFALQTVLDGAYLWGHAALPGGVTYATYAHRGAYLLIVTALLAAAFVIVASRSENIESGSPLVRPLIYL WLAQNVMLVLSSIQRLHMYVETYALTYWRVAALVWMVLVAIGLVLIVFRIVLAKPVSWLIRMNLLMLSVTLYACTFVNLD AAIADYNVAHSREAGRSGPSIDSDYLVWLGPQALPALDRAMRLIPTDRRLGSSRDLLLRQQDIQMEAWRSWSFRGWRLQR YLDTHPLSSNPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54142; Mature: 54011
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASAELTAAPAASDSRWFKFAIAVGLVGLADALLYNGRPIGLALPLFLGVLAATSIFVN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VVMTSRARLIGAGVLVVAGLAPVIEDLSLLSFAVMLVMILSAVAFATDSYARGFWLPLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCHHH ARQLLLFGPFRLVPDMIMILREHSLTRALLIWGLPLTFGAVFAALFAAANPVIAQWLAIL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH SADDSASELTMMRAIFWLLALTMIWPFVHLRWRQRIEPPQPAVEPSPGQPLSLLAIVLGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH ATVIRSLVLFNLLFALQTVLDGAYLWGHAALPGGVTYATYAHRGAYLLIVTALLAAAFVI HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHH VASRSENIESGSPLVRPLIYLWLAQNVMLVLSSIQRLHMYVETYALTYWRVAALVWMVLV HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLVLIVFRIVLAKPVSWLIRMNLLMLSVTLYACTFVNLDAAIADYNVAHSREAGRSGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCCC SIDSDYLVWLGPQALPALDRAMRLIPTDRRLGSSRDLLLRQQDIQMEAWRSWSFRGWRLQ CCCCCEEEEECCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH RYLDTHPLSSNPS HHHHCCCCCCCCC >Mature Secondary Structure TASAELTAAPAASDSRWFKFAIAVGLVGLADALLYNGRPIGLALPLFLGVLAATSIFVN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VVMTSRARLIGAGVLVVAGLAPVIEDLSLLSFAVMLVMILSAVAFATDSYARGFWLPLSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCHHH ARQLLLFGPFRLVPDMIMILREHSLTRALLIWGLPLTFGAVFAALFAAANPVIAQWLAIL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH SADDSASELTMMRAIFWLLALTMIWPFVHLRWRQRIEPPQPAVEPSPGQPLSLLAIVLGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH ATVIRSLVLFNLLFALQTVLDGAYLWGHAALPGGVTYATYAHRGAYLLIVTALLAAAFVI HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHH VASRSENIESGSPLVRPLIYLWLAQNVMLVLSSIQRLHMYVETYALTYWRVAALVWMVLV HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLVLIVFRIVLAKPVSWLIRMNLLMLSVTLYACTFVNLDAAIADYNVAHSREAGRSGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCCC SIDSDYLVWLGPQALPALDRAMRLIPTDRRLGSSRDLLLRQQDIQMEAWRSWSFRGWRLQ CCCCCEEEEECCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH RYLDTHPLSSNPS HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA