Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340838
Identifier: 146340838
GI number: 146340838
Start: 4072771
End: 4073511
Strand: Reverse
Name: 146340838
Synonym: BRADO3901
Alternate gene names: NA
Gene position: 4073511-4072771 (Counterclockwise)
Preceding gene: 146340839
Following gene: 146340836
Centisome position: 54.63
GC content: 69.23
Gene sequence:
>741_bases ATGTCCGATCCATGCCAAGACCACCCGCCGCTCGCCGCCGAGCCGCCGCCAGATTGCCCGCGCTGCCAGAAGCCGTTGCC GCTGTGCATCTGCGACAGCGTCACGCCGATGGAGAGCAGGCTCGGTCTCCTGATCCTGCAGCATCCGCAGGAGCAGGACC GTGCGCTCGGCACGGCGCGGCTGGCCGCGCAGCATTTCAACAACGCCATCGTGAAGGTCGGGCTGTCCTGGCCGAGCCTC GCCAAGGCGCTGGGCCGGCCGGTCGACGATCCCGCGCGCTGGGCCATCCTCTATCTCGGCTCCGCCAAGGCGGCTGATCT CGACCCCGAGAGCGAGGTCGTGGCGCTGACCCGCAAGGGCGAGGTCGCCGACAACCAGCGCGCCATCCTCAAATTGATCG AAGGCGTGATCCTGCTCGACGGCACCTGGAGCCAGGCCAAGGCGCTGTGGTGGCGCAATCCCTGGATGCTGAAATGCCAG CGCGTCATCCTCGGCCCGCGCCGGCCCTCGCACTACGGGCAGTTACGCCGCGAGCCCCGCCGCGACGGACTGTCGACCAT CGAGGCGGCCGGCATGCTGATGGCGGCCCTGGAACGGCGGCCGGAGATCGCGGCCGCGCTCGATTCCAGCTTCGAGCGCA TGCTGGAGCGGTATCGCGAGGTGGAAAAGTCGCATCCCGAGCTTACGCCGCGACCGAAGCCGCGCAAGCCCAACTGGCGC GGCCGTAAACGCCGGGTTTAG
Upstream 100 bases:
>100_bases CTTGATCGACCGGCTGCGCCGCCGCTCGGCACCCGAGCCGCTCGCCGCGCCTGCGGAATGAGGCGTTGTGGTGGTCGCCA CGGGCGCGTATAGGCGCGCC
Downstream 100 bases:
>100_bases GAACCCAGGGTACGCTTCTTGCATTGCAGCATAGCATGAAGGAAGCGAGCTATGCCGGATCTTGAGAAATCGAACGTGGT GCAGTTGCGGGATTACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; DTW Domain; Dtw Domain Protein; DTW Domain Protein; DTW Domain Containing Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSDPCQDHPPLAAEPPPDCPRCQKPLPLCICDSVTPMESRLGLLILQHPQEQDRALGTARLAAQHFNNAIVKVGLSWPSL AKALGRPVDDPARWAILYLGSAKAADLDPESEVVALTRKGEVADNQRAILKLIEGVILLDGTWSQAKALWWRNPWMLKCQ RVILGPRRPSHYGQLRREPRRDGLSTIEAAGMLMAALERRPEIAAALDSSFERMLERYREVEKSHPELTPRPKPRKPNWR GRKRRV
Sequences:
>Translated_246_residues MSDPCQDHPPLAAEPPPDCPRCQKPLPLCICDSVTPMESRLGLLILQHPQEQDRALGTARLAAQHFNNAIVKVGLSWPSL AKALGRPVDDPARWAILYLGSAKAADLDPESEVVALTRKGEVADNQRAILKLIEGVILLDGTWSQAKALWWRNPWMLKCQ RVILGPRRPSHYGQLRREPRRDGLSTIEAAGMLMAALERRPEIAAALDSSFERMLERYREVEKSHPELTPRPKPRKPNWR GRKRRV >Mature_245_residues SDPCQDHPPLAAEPPPDCPRCQKPLPLCICDSVTPMESRLGLLILQHPQEQDRALGTARLAAQHFNNAIVKVGLSWPSLA KALGRPVDDPARWAILYLGSAKAADLDPESEVVALTRKGEVADNQRAILKLIEGVILLDGTWSQAKALWWRNPWMLKCQR VILGPRRPSHYGQLRREPRRDGLSTIEAAGMLMAALERRPEIAAALDSSFERMLERYREVEKSHPELTPRPKPRKPNWRG RKRRV
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI21358337, Length=206, Percent_Identity=30.0970873786408, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27740; Mature: 27608
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPCQDHPPLAAEPPPDCPRCQKPLPLCICDSVTPMESRLGLLILQHPQEQDRALGTAR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHH LAAQHFNNAIVKVGLSWPSLAKALGRPVDDPARWAILYLGSAKAADLDPESEVVALTRKG HHHHHHCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC EVADNQRAILKLIEGVILLDGTWSQAKALWWRNPWMLKCQRVILGPRRPSHYGQLRREPR CCCCHHHHHHHHHCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHH RDGLSTIEAAGMLMAALERRPEIAAALDSSFERMLERYREVEKSHPELTPRPKPRKPNWR HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GRKRRV CCCCCC >Mature Secondary Structure SDPCQDHPPLAAEPPPDCPRCQKPLPLCICDSVTPMESRLGLLILQHPQEQDRALGTAR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHH LAAQHFNNAIVKVGLSWPSLAKALGRPVDDPARWAILYLGSAKAADLDPESEVVALTRKG HHHHHHCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC EVADNQRAILKLIEGVILLDGTWSQAKALWWRNPWMLKCQRVILGPRRPSHYGQLRREPR CCCCHHHHHHHHHCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHH RDGLSTIEAAGMLMAALERRPEIAAALDSSFERMLERYREVEKSHPELTPRPKPRKPNWR HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GRKRRV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA