Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340830
Identifier: 146340830
GI number: 146340830
Start: 4064957
End: 4065802
Strand: Direct
Name: 146340830
Synonym: BRADO3893
Alternate gene names: NA
Gene position: 4064957-4065802 (Clockwise)
Preceding gene: 146340829
Following gene: 146340831
Centisome position: 54.51
GC content: 65.96
Gene sequence:
>846_bases TTGGACCCTCTTGCCGCGATCCTGATGCTGCTCGCCGGCCTGCTGCACGCGACCTGGCACGCCATCGTCAAAACCGGAAG CGGCCTGTCCATCCTCGCGGGCATGGGACTTGTGAGCAGCATCGTCGCCCTGCCCGTCTTGCTCTTTGTCCCTGCGCCAT CATCTTCGACGTGGCCGATCATCGTGACATCGCTCGTCCTGCACGCCGGCTACAAAGCGAGCCTCGCAACAGCCTATGGC TCCGCGGAGTTCGGCCGCGCCTACCCGGTCGCCCGCGGCGTCGTTCCCTTGTTCGCGACGCTGTTCGCCTTTGCGGGATT GCATCAACTGCCCGGACCAGGGCAGTTCATCGGTATCTTGGTGATCGTACTCGGAGTTCTCGGTCTCGCCCGCGATCGCC TGCATGGCTCCATCGACCGGCGCGCGCTGATGGCCGCGATCTGCGCCGCCGCCATGGTCGCCGGCTACTCGGTCGTCGAC GCCTGGGGCACGCGTCAGCCGGAGGGCTGGGCCTCATTCACCGCGTGGATCGTGGTCCTCGACAGTGTCGTCTTCTTCAT CGTGGCAGCCCTCTACCGCGGCCCGGGGATTGTCGCGGATCTTCGTCACGCGAAGCTGGCCGTGCTCGTCGCGGGCGCTC TCGGCCTGACGTCGTTCGCCGTGTTCCTGTGGGCGTTGAGCCGGAACGAGATCGCCAACGTGGTTGCTTTTCGTGAAAGC GGCGTTCTGTTCGCGACGCTGCTTGGGGTCGTGGTCCTGAGGGAGCCTGCGACCGCACGGCGACTGGTTTGCGCGACGCT CATCGCGATCGGCCTGACCACGATTGCCGTATTGAGGCCGGCCTGA
Upstream 100 bases:
>100_bases ATCATTTCGCGGCAGGCCTTCGCACGCGACCCGATCTCCTACTTCGCCGCAGCGGTCTGGCGGCCCGAAAGCTGAAGGCC GCGAACCAAGGCTTGCGACA
Downstream 100 bases:
>100_bases TCTGGTGATTGTGGCTCCATATTCATGTCATTGTGCACAAGTGTCGTATATGAATGCGTCGAACCGGAACCCCCGTAAAA CTCCTGGTTGCAAATTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane; Transporter Dme Family; Transmembrane Protein; Inner Membrane Protein; Transporter Of DMT Superfamily; DMT Family Permease
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MDPLAAILMLLAGLLHATWHAIVKTGSGLSILAGMGLVSSIVALPVLLFVPAPSSSTWPIIVTSLVLHAGYKASLATAYG SAEFGRAYPVARGVVPLFATLFAFAGLHQLPGPGQFIGILVIVLGVLGLARDRLHGSIDRRALMAAICAAAMVAGYSVVD AWGTRQPEGWASFTAWIVVLDSVVFFIVAALYRGPGIVADLRHAKLAVLVAGALGLTSFAVFLWALSRNEIANVVAFRES GVLFATLLGVVVLREPATARRLVCATLIAIGLTTIAVLRPA
Sequences:
>Translated_281_residues MDPLAAILMLLAGLLHATWHAIVKTGSGLSILAGMGLVSSIVALPVLLFVPAPSSSTWPIIVTSLVLHAGYKASLATAYG SAEFGRAYPVARGVVPLFATLFAFAGLHQLPGPGQFIGILVIVLGVLGLARDRLHGSIDRRALMAAICAAAMVAGYSVVD AWGTRQPEGWASFTAWIVVLDSVVFFIVAALYRGPGIVADLRHAKLAVLVAGALGLTSFAVFLWALSRNEIANVVAFRES GVLFATLLGVVVLREPATARRLVCATLIAIGLTTIAVLRPA >Mature_281_residues MDPLAAILMLLAGLLHATWHAIVKTGSGLSILAGMGLVSSIVALPVLLFVPAPSSSTWPIIVTSLVLHAGYKASLATAYG SAEFGRAYPVARGVVPLFATLFAFAGLHQLPGPGQFIGILVIVLGVLGLARDRLHGSIDRRALMAAICAAAMVAGYSVVD AWGTRQPEGWASFTAWIVVLDSVVFFIVAALYRGPGIVADLRHAKLAVLVAGALGLTSFAVFLWALSRNEIANVVAFRES GVLFATLLGVVVLREPATARRLVCATLIAIGLTTIAVLRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29269; Mature: 29269
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLAAILMLLAGLLHATWHAIVKTGSGLSILAGMGLVSSIVALPVLLFVPAPSSSTWPI CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH IVTSLVLHAGYKASLATAYGSAEFGRAYPVARGVVPLFATLFAFAGLHQLPGPGQFIGIL HHHHHHHHCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VIVLGVLGLARDRLHGSIDRRALMAAICAAAMVAGYSVVDAWGTRQPEGWASFTAWIVVL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DSVVFFIVAALYRGPGIVADLRHAKLAVLVAGALGLTSFAVFLWALSRNEIANVVAFRES HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVLFATLLGVVVLREPATARRLVCATLIAIGLTTIAVLRPA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDPLAAILMLLAGLLHATWHAIVKTGSGLSILAGMGLVSSIVALPVLLFVPAPSSSTWPI CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH IVTSLVLHAGYKASLATAYGSAEFGRAYPVARGVVPLFATLFAFAGLHQLPGPGQFIGIL HHHHHHHHCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VIVLGVLGLARDRLHGSIDRRALMAAICAAAMVAGYSVVDAWGTRQPEGWASFTAWIVVL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DSVVFFIVAALYRGPGIVADLRHAKLAVLVAGALGLTSFAVFLWALSRNEIANVVAFRES HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVLFATLLGVVVLREPATARRLVCATLIAIGLTTIAVLRPA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA