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The map label for this gene is rlpA [H]

Identifier: 146340764

GI number: 146340764

Start: 3990328

End: 3991179

Strand: Direct

Name: rlpA [H]

Synonym: BRADO3822

Alternate gene names: 146340764

Gene position: 3990328-3991179 (Clockwise)

Preceding gene: 146340763

Following gene: 146340766

Centisome position: 53.51

GC content: 67.37

Gene sequence:

>852_bases
ATGGTCGCGAATTGCGCCTCATCGAACAAGTTCGCCAGCAAGGTCGATCCGAAATATGGCGTGTCGTCGAGCCCGCGCGT
CGTCGGCTTCGGCGAGCCGGTGCCGAAGGGCGGTGGCGTCTACCGGATCGGCAAGCCGTATACGGTCGCCGGCAAGACCT
ACGTGCCGGAGGAGGACGTCAATTACCGCGCCGAGGGCATGGCGTCCTGGTACGGCGATGATTTCCACGGCCGCCTGACC
GCCAATGGCGAGGTGTTCGACATGACCTCGCTGACGGCGGCACACCCGACGCTGCCGATGCCGAGCTATGCGCGCGTCAC
CAACCTCGCCAATGGCAAATCGCTGATCGTTCGAATCAACGACCGCGGCCCCTACCATGCCAACCGTCTGATCGACGTTT
CGAACAAGGCGGCCGACCTGCTCGAGTTCAAGGGCAGCGGCGTGGCGCGTGTCCGGGTCGAATATGTCGGCCGGGCGCCG
CTCGAGGGCTCGGACGACACGCAGTTGATCGCCACCTTGCGCACCGGCATCCCGGCGCCGGCGCCATCCCTGGTGCGCGT
CGCCTCAGCCAAGCCGTTCGTTCCCGAGGTCGGCTCCGGCCGGCCGATTCGCGGCGAGATCCCGCTGCCGGAGGGACGCC
CCTATACGCTCGGCGACACGTCGGCCGCCATGGCCTCGATGGGCGCCGCATCGGAAATGTCGGCCTCGAGCCGGACGCGC
GGGCGCATCCTCGATAACCCGCGCGCAGTCTCGTATGACCAGGACGGCCGCTATGTCCCGCAGGGTCAAGCCAGCGGCAA
TGATGGCGCCGACGAGGCCCGCGACATCATGAGTGGCCGCGGCCTTTACTGA

Upstream 100 bases:

>100_bases
GCGACGACCGGCATAGTGGTATTCGGGGTCGATGGGGATTGCTCAAACAGATCCGGCCGGGCGAGCGGTGCGCAGTGCCG
TCGCTATCCTGGCCTGCCTG

Downstream 100 bases:

>100_bases
CGACAGTCTTCCCTGACTTCGAGACGCGGCCGGTCAGCCTGACCGCCCCGTGACGGGGCGGCTTGAACCCCGGGCGGCGC
GTCGACATCATCGCGCATCG

Product: rare lipoprotein A family protein (rlpA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDVNYRAEGMASWYGDDFHGRLT
ANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRINDRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAP
LEGSDDTQLIATLRTGIPAPAPSLVRVASAKPFVPEVGSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSRTR
GRILDNPRAVSYDQDGRYVPQGQASGNDGADEARDIMSGRGLY

Sequences:

>Translated_283_residues
MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDVNYRAEGMASWYGDDFHGRLT
ANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRINDRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAP
LEGSDDTQLIATLRTGIPAPAPSLVRVASAKPFVPEVGSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSRTR
GRILDNPRAVSYDQDGRYVPQGQASGNDGADEARDIMSGRGLY
>Mature_283_residues
MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDVNYRAEGMASWYGDDFHGRLT
ANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRINDRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAP
LEGSDDTQLIATLRTGIPAPAPSLVRVASAKPFVPEVGSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSRTR
GRILDNPRAVSYDQDGRYVPQGQASGNDGADEARDIMSGRGLY

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=111, Percent_Identity=48.6486486486487, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 30028; Mature: 30028

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDV
CCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEECCCEECCCCCC
NYRAEGMASWYGDDFHGRLTANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRIN
CCCCCCHHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEC
DRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAPLEGSDDTQLIATLRTGIPAP
CCCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHEEHHHCCCCC
APSLVRVASAKPFVPEVGSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSRTR
CHHHEEECCCCCCCCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHCCHHHHCCCCCCC
GRILDNPRAVSYDQDGRYVPQGQASGNDGADEARDIMSGRGLY
CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDV
CCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCEEECCCEECCCCCC
NYRAEGMASWYGDDFHGRLTANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRIN
CCCCCCHHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEC
DRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAPLEGSDDTQLIATLRTGIPAP
CCCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHEEHHHCCCCC
APSLVRVASAKPFVPEVGSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSRTR
CHHHEEECCCCCCCCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHCCHHHHCCCCCCC
GRILDNPRAVSYDQDGRYVPQGQASGNDGADEARDIMSGRGLY
CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]