Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is pheC [H]
Identifier: 146340753
GI number: 146340753
Start: 3980235
End: 3981056
Strand: Reverse
Name: pheC [H]
Synonym: BRADO3810
Alternate gene names: 146340753
Gene position: 3981056-3980235 (Counterclockwise)
Preceding gene: 146340755
Following gene: 146340752
Centisome position: 53.39
GC content: 63.87
Gene sequence:
>822_bases ATGCGGCCCAACCGAACGAGGTATTTCAATATGGGATTTTTCAACCGGACGATCGCCACCTTGAGCGCGGTTGCGCTGGT CTGCGGGCTCGCCGCGCAGGCGCTGGCGGATCAGGCCTCGCGCCTCGACGAGATCATGCAGCGCGGTGCCCTGCGCGTCG GCATGACCGGCGACTACAAGCCGTTCACCTACCTGGACAAGGCCACCGGCAAGTTCTCCGGCTTCGACGTCGACATGGCC GAGGCGCTCGGCAAGGCGATGGGCGTCAAGGTCGAGTTCGTGCCGACCAGCTGGCCGCAGCTGATGAAGGATTTCGAGGC CGACAAGTTCGACGTCGCGATGGGCGGCGTGTCGATCACGCTCGACCGCCAGAAGAAGGGCTTCTTCTCGACGCCGATCA TGCGCGAGGGCAAGACCCCGATCGCCCGCTGCAGCGACACCGGCAAGTACCAGACGCTCGCCGATATCGACAGACCGGGC ACCCGTGTGGTCGTCAACCCCGGCGGCACCAACGAGCGTTTCGCCCGCGCCAACATCAAGGCGGCCGACATCCGCGTCCA CCCCGACAACGTCACGATCTTCGACGAGATCGCCAAGGGTGACGCCGACCTGATGATGACCGATGCCTCCGAAACCCGCT ACCAGCAGAAGCTGCATCCCGGCGTGCTTTGCGCCGTCCATCCCGACAAGCCGTTCGACTTCTCCGAGAAGGCCTATTGG CTGCAGCGTGACGTCGCGCTGAAGGCGTTCGTCGACCAGTGGCTGCACATGTCGACCGAAAATGGCAGCTACCAGGCGAT CTACAAGACCTGGTTCGACTGA
Upstream 100 bases:
>100_bases CCGATGCCTCACTGATCGATATGCCCACGGATCCGACCTCGCTGTTGGTAAGCTGCCCTGCGCCACCCCTCGTCGGGCGC GCTGACGTCGGCTAAGACTA
Downstream 100 bases:
>100_bases CGAACGACCTCATCCTCCGCGGTCCGGCTGATGCGCTGGACCGCGACCGAACACCCTAGCGGCAGTGCTTCGACGGACCG CGGAAGCAGTCAGCGGTTGA
Product: cyclohexadienyl dehydratase
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRPNRTRYFNMGFFNRTIATLSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYKPFTYLDKATGKFSGFDVDMA EALGKAMGVKVEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQKKGFFSTPIMREGKTPIARCSDTGKYQTLADIDRPG TRVVVNPGGTNERFARANIKAADIRVHPDNVTIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYW LQRDVALKAFVDQWLHMSTENGSYQAIYKTWFD
Sequences:
>Translated_273_residues MRPNRTRYFNMGFFNRTIATLSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYKPFTYLDKATGKFSGFDVDMA EALGKAMGVKVEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQKKGFFSTPIMREGKTPIARCSDTGKYQTLADIDRPG TRVVVNPGGTNERFARANIKAADIRVHPDNVTIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYW LQRDVALKAFVDQWLHMSTENGSYQAIYKTWFD >Mature_273_residues MRPNRTRYFNMGFFNRTIATLSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYKPFTYLDKATGKFSGFDVDMA EALGKAMGVKVEFVPTSWPQLMKDFEADKFDVAMGGVSITLDRQKKGFFSTPIMREGKTPIARCSDTGKYQTLADIDRPG TRVVVNPGGTNERFARANIKAADIRVHPDNVTIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYW LQRDVALKAFVDQWLHMSTENGSYQAIYKTWFD
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=29.7619047619048, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1787031, Length=215, Percent_Identity=27.906976744186, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787085, Length=239, Percent_Identity=25.1046025104602, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788649, Length=269, Percent_Identity=26.3940520446097, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 30540; Mature: 30540
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPNRTRYFNMGFFNRTIATLSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYK CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC PFTYLDKATGKFSGFDVDMAEALGKAMGVKVEFVPTSWPQLMKDFEADKFDVAMGGVSIT CCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEEECCEEEE LDRQKKGFFSTPIMREGKTPIARCSDTGKYQTLADIDRPGTRVVVNPGGTNERFARANIK EECCCCCCCCCCCCCCCCCCCEECCCCCCEEEHHHCCCCCCEEEECCCCCCCCEEECCCE AADIRVHPDNVTIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYW EEEEEECCCCEEEEHHHHCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH LQRDVALKAFVDQWLHMSTENGSYQAIYKTWFD HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure MRPNRTRYFNMGFFNRTIATLSAVALVCGLAAQALADQASRLDEIMQRGALRVGMTGDYK CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC PFTYLDKATGKFSGFDVDMAEALGKAMGVKVEFVPTSWPQLMKDFEADKFDVAMGGVSIT CCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEEECCEEEE LDRQKKGFFSTPIMREGKTPIARCSDTGKYQTLADIDRPGTRVVVNPGGTNERFARANIK EECCCCCCCCCCCCCCCCCCCEECCCCCCEEEHHHCCCCCCEEEECCCCCCCCEEECCCE AADIRVHPDNVTIFDEIAKGDADLMMTDASETRYQQKLHPGVLCAVHPDKPFDFSEKAYW EEEEEECCCCEEEEHHHHCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH LQRDVALKAFVDQWLHMSTENGSYQAIYKTWFD HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]