Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yaiN [C]
Identifier: 146340752
GI number: 146340752
Start: 3979825
End: 3980103
Strand: Reverse
Name: yaiN [C]
Synonym: BRADO3809
Alternate gene names: 146340752
Gene position: 3980103-3979825 (Counterclockwise)
Preceding gene: 146340753
Following gene: 146340751
Centisome position: 53.38
GC content: 65.23
Gene sequence:
>279_bases ATGTCGCACACCATCAAGCACAAGCCGAAGCTGCTGGCGCGAGTCCGGCGCATCAAAGGTCAGATCGACGCGGTGGAGCG CGCGCTCGAGGCGGAGCTCGGCTGCGCCGACGTGCTGATGCTCGTCGCGTCCGTGAGAGGCGCGATCGGCGGGCTGACGA CCGAACTGCTGGAAGATCACATCCGGCACCATGTCGTGGATCCCGCCCATGAGACCGACCCCGACAGGGCCAAGGGTGCC GCGGACCTGATCGAGGTCGTCAGGACCTATCTGAAATGA
Upstream 100 bases:
>100_bases TGCGCTGGACCGCGACCGAACACCCTAGCGGCAGTGCTTCGACGGACCGCGGAAGCAGTCAGCGGTTGACCCGCATAGGG TACCCCCCTATCTTATCGGG
Downstream 100 bases:
>100_bases GGGCCGCATGACCGACCTGTCCCACCTGCTGCAGCAAGGCAGCGCGCATGCGTGGCTGTTCGCGCCGAGCGCGATCCTCC TCGGCGCGCTGCACGGCCTC
Product: putative yohL-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSHTIKHKPKLLARVRRIKGQIDAVERALEAELGCADVLMLVASVRGAIGGLTTELLEDHIRHHVVDPAHETDPDRAKGA ADLIEVVRTYLK
Sequences:
>Translated_92_residues MSHTIKHKPKLLARVRRIKGQIDAVERALEAELGCADVLMLVASVRGAIGGLTTELLEDHIRHHVVDPAHETDPDRAKGA ADLIEVVRTYLK >Mature_91_residues SHTIKHKPKLLARVRRIKGQIDAVERALEAELGCADVLMLVASVRGAIGGLTTELLEDHIRHHVVDPAHETDPDRAKGAA DLIEVVRTYLK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=46.7391304347826, Blast_Score=78, Evalue=9e-17, Organism=Escherichia coli, GI1788422, Length=93, Percent_Identity=37.6344086021505, Blast_Score=63, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10137; Mature: 10006
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTIKHKPKLLARVRRIKGQIDAVERALEAELGCADVLMLVASVRGAIGGLTTELLEDH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRHHVVDPAHETDPDRAKGAADLIEVVRTYLK HHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHC >Mature Secondary Structure SHTIKHKPKLLARVRRIKGQIDAVERALEAELGCADVLMLVASVRGAIGGLTTELLEDH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRHHVVDPAHETDPDRAKGAADLIEVVRTYLK HHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA