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The map label for this gene is rcnA [H]

Identifier: 146340751

GI number: 146340751

Start: 3978753

End: 3979817

Strand: Reverse

Name: rcnA [H]

Synonym: BRADO3808

Alternate gene names: 146340751

Gene position: 3979817-3978753 (Counterclockwise)

Preceding gene: 146340752

Following gene: 146340750

Centisome position: 53.37

GC content: 67.98

Gene sequence:

>1065_bases
ATGACCGACCTGTCCCACCTGCTGCAGCAAGGCAGCGCGCATGCGTGGCTGTTCGCGCCGAGCGCGATCCTCCTCGGCGC
GCTGCACGGCCTCGAGCCCGGCCATTCCAAGACCATGATGGCCGCGTTCATCGTCGCGATCCGCGGCACCGTTCTGCAGG
CCGTGCTGCTCGGCCTCTCCGCGACCATCTCCCACACGGCGATCGTCTGGGTGGTCGCGCTCGCCGGGCTTCATTTCGGC
CAAGAACTGTCCGGGGAACGCAGCGAGGCCTATCTGCAGCTGATCTCGGCGGTCATCATCATCGGCATCGCGACCTGGAT
GATCTGGCGCACCTGGCGCGATCAGAACGGTCACCACCACCATCATCACCATCACGAGGCGACGCAATCGGTCGTGCTGG
CCGGGCACTCGCTCGCCGTCGAGATTTTCGAGGACGGCGTGCCGCCCCGCTGGCGGATCCGCAGCGCCAGCGGAGCGCTC
CCGTCGGCCGAGTCGGTCCGGCTTACGACCCTCCGCGGCGACGGGGGCGAGCAGCGGTTCAGCTTCCGCTCTGACGGCAG
TTATCTGGAAAGCATCGAGGAGATCCCGGAGCCCCACGCCTTCAAGGCGCGCATCGCACTCGCTGGCGACACGGCCGAGA
TGCTGTACGAGGAGCACGCCCACGATCACATGGATCTCGGCGAGGAGGACGACGCCCACGCGCGCGCGCACGCGGCCGAC
ATTCGCAGGCGCTTCGCCGGCCGCACCGTCACGACGGCCCAGATCGTTCTGTTCGGACTGTCCGGCGGACTCATCCCCTG
CCCGGCCGCCATCACGGTCCTGCTGCTGTGCATTCAGCTGCAGCAGTTCAGCCTGGGCTTCGTCCTCGTTCTGTGCTTTG
GCATCGGCCTGGCCATCACCATGGTGTCCGCCGGCGTCCTGGCGGCCCTGAGCCTTCGGCATGTCGAGCGCCGCTGGTCC
GGCTTCAGCCGTTTCGCGCACCGCGCTCCCTACGTCTCGGCGGCCCTGATCGTGCTGGTCGGCCTGTACACGGGCTGGCT
CGGCCTGCATGAGGTCATGACGTGA

Upstream 100 bases:

>100_bases
CACCATGTCGTGGATCCCGCCCATGAGACCGACCCCGACAGGGCCAAGGGTGCCGCGGACCTGATCGAGGTCGTCAGGAC
CTATCTGAAATGAGGGCCGC

Downstream 100 bases:

>100_bases
GGTGGCCGGTTGAGGCGAACAGATCATGTCCCATGAGATCCGATCCATCGAAGCAAGCGACATCGCGGCGTTTCGTGCCG
TGCTGGATAGCGTGGCGCGC

Product: putative high-affinity nickel-transporter (yohM-like protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTDLSHLLQQGSAHAWLFAPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVLQAVLLGLSATISHTAIVWVVALAGLHFG
QELSGERSEAYLQLISAVIIIGIATWMIWRTWRDQNGHHHHHHHHEATQSVVLAGHSLAVEIFEDGVPPRWRIRSASGAL
PSAESVRLTTLRGDGGEQRFSFRSDGSYLESIEEIPEPHAFKARIALAGDTAEMLYEEHAHDHMDLGEEDDAHARAHAAD
IRRRFAGRTVTTAQIVLFGLSGGLIPCPAAITVLLLCIQLQQFSLGFVLVLCFGIGLAITMVSAGVLAALSLRHVERRWS
GFSRFAHRAPYVSAALIVLVGLYTGWLGLHEVMT

Sequences:

>Translated_354_residues
MTDLSHLLQQGSAHAWLFAPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVLQAVLLGLSATISHTAIVWVVALAGLHFG
QELSGERSEAYLQLISAVIIIGIATWMIWRTWRDQNGHHHHHHHHEATQSVVLAGHSLAVEIFEDGVPPRWRIRSASGAL
PSAESVRLTTLRGDGGEQRFSFRSDGSYLESIEEIPEPHAFKARIALAGDTAEMLYEEHAHDHMDLGEEDDAHARAHAAD
IRRRFAGRTVTTAQIVLFGLSGGLIPCPAAITVLLLCIQLQQFSLGFVLVLCFGIGLAITMVSAGVLAALSLRHVERRWS
GFSRFAHRAPYVSAALIVLVGLYTGWLGLHEVMT
>Mature_353_residues
TDLSHLLQQGSAHAWLFAPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVLQAVLLGLSATISHTAIVWVVALAGLHFGQ
ELSGERSEAYLQLISAVIIIGIATWMIWRTWRDQNGHHHHHHHHEATQSVVLAGHSLAVEIFEDGVPPRWRIRSASGALP
SAESVRLTTLRGDGGEQRFSFRSDGSYLESIEEIPEPHAFKARIALAGDTAEMLYEEHAHDHMDLGEEDDAHARAHAADI
RRRFAGRTVTTAQIVLFGLSGGLIPCPAAITVLLLCIQLQQFSLGFVLVLCFGIGLAITMVSAGVLAALSLRHVERRWSG
FSRFAHRAPYVSAALIVLVGLYTGWLGLHEVMT

Specific function: Efflux system for nickel and cobalt [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=124, Percent_Identity=62.9032258064516, Blast_Score=157, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 38494; Mature: 38363

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSHLLQQGSAHAWLFAPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVLQAVLLGLS
CCCHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATISHTAIVWVVALAGLHFGQELSGERSEAYLQLISAVIIIGIATWMIWRTWRDQNGHHH
HHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HHHHHEATQSVVLAGHSLAVEIFEDGVPPRWRIRSASGALPSAESVRLTTLRGDGGEQRF
CHHHHHHHHHHHHCCCHHEEHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
SFRSDGSYLESIEEIPEPHAFKARIALAGDTAEMLYEEHAHDHMDLGEEDDAHARAHAAD
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IRRRFAGRTVTTAQIVLFGLSGGLIPCPAAITVLLLCIQLQQFSLGFVLVLCFGIGLAIT
HHHHHCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVSAGVLAALSLRHVERRWSGFSRFAHRAPYVSAALIVLVGLYTGWLGLHEVMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDLSHLLQQGSAHAWLFAPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVLQAVLLGLS
CCHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATISHTAIVWVVALAGLHFGQELSGERSEAYLQLISAVIIIGIATWMIWRTWRDQNGHHH
HHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HHHHHEATQSVVLAGHSLAVEIFEDGVPPRWRIRSASGALPSAESVRLTTLRGDGGEQRF
CHHHHHHHHHHHHCCCHHEEHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
SFRSDGSYLESIEEIPEPHAFKARIALAGDTAEMLYEEHAHDHMDLGEEDDAHARAHAAD
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IRRRFAGRTVTTAQIVLFGLSGGLIPCPAAITVLLLCIQLQQFSLGFVLVLCFGIGLAIT
HHHHHCCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVSAGVLAALSLRHVERRWSGFSRFAHRAPYVSAALIVLVGLYTGWLGLHEVMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA