Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340745
Identifier: 146340745
GI number: 146340745
Start: 3971595
End: 3972008
Strand: Direct
Name: 146340745
Synonym: BRADO3800
Alternate gene names: NA
Gene position: 3971595-3972008 (Clockwise)
Preceding gene: 146340744
Following gene: 146340748
Centisome position: 53.26
GC content: 69.32
Gene sequence:
>414_bases ATGACCATGGTGGATGTTTATCTCGCGGGCTCCCGCCCGACGCGCCGGGCGGCGGCCGAAAGCTTCACGGGGACTGTCTG GCAGGACCCGATCATCACGCCGCAGGCGCCCGCCCGCGTGGCGTCGGCGCGCGTGGCGTTCGAGCCCGGCGCCCGCACCG CCTGGCATACCCATCCGCTCGGCCAGACTCTCTACGTCATCCAGGGCGTCGGCCGGGTGCAGGCAAAGGGCGGACCGGTG CGCGAGATCAAGGCCGGCGACGTCGTCTGGATTCCGCCGGGAGAGAAACACTGGCATGGCGCCGCGCCGACCACGGGCAT GGTCCATGTCGCGATGCATGAATCGCTCAACGGCGAGCACGTGACCTGGATGGAGCACGTCACCGACGAGGAATACGCCA CGCCCGTCGGCTAA
Upstream 100 bases:
>100_bases GGGCCTGTATCCGATGAACGCCGAAACCAAGGCGCGCTACGCCGCGTCGAAGAAGTAGTTCGCCGCGACAATCGATCGAC GGCACAGAGCCAGGAAAGGC
Downstream 100 bases:
>100_bases GGCTGGACTGACAGGATGTCGGGCGCGCGGTCGCAAGGCCGCGCGCTTTTGCTTTGGAGCAGCAGCGCTCAGTTCACGCG CGTCCAGGTCTGGCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin Family Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Secreted Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTMVDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPLGQTLYVIQGVGRVQAKGGPV REIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEHVTWMEHVTDEEYATPVG
Sequences:
>Translated_137_residues MTMVDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPLGQTLYVIQGVGRVQAKGGPV REIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEHVTWMEHVTDEEYATPVG >Mature_136_residues TMVDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPLGQTLYVIQGVGRVQAKGGPVR EIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEHVTWMEHVTDEEYATPVG
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14840; Mature: 14709
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMVDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPL CEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEECCCC GQTLYVIQGVGRVQAKGGPVREIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEH CCEEEEEECCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCE VTWMEHVTDEEYATPVG EEHHHHCCCCCCCCCCC >Mature Secondary Structure TMVDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPL EEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEECCCC GQTLYVIQGVGRVQAKGGPVREIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEH CCEEEEEECCCEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCE VTWMEHVTDEEYATPVG EEHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA