Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cysJ [H]
Identifier: 146340740
GI number: 146340740
Start: 3966073
End: 3967680
Strand: Direct
Name: cysJ [H]
Synonym: BRADO3794
Alternate gene names: 146340740
Gene position: 3966073-3967680 (Clockwise)
Preceding gene: 146340739
Following gene: 146340744
Centisome position: 53.19
GC content: 66.98
Gene sequence:
>1608_bases ATGAACCAGATCACACCGATGCCGAAGCTCGAGATCATTCCTCCGACCGCGCCGTTCTCGGAAGCGCAGCGCTCCTGGCT CAACGGCTTCCTCGCCGGCGCGCTCGGCCTCGACGGCTCGACGCCATTGGCTCCTGCGCAGAACGGCACCGCGCTTGCTC CCGCCGGCGACGGCGATGACGGCGAGGCGCCGTGGCACGATCAGACCATGCCAATCACCGAGCGCATGAAGCTTGCCGAA GGCCGCCCGCTGCGCCGTCGTATGATGGCGGCGATGGCGCAGCAGGACTGCGGCCAGTGCGGCTACAATTGCAGCGACTA CTCGGACGCGATCGCCGATCACAGCGAGACGCGCCTCAATCTGTGCGTCCCCGGCGGCAAGGAAACCGCGCGGATGCTGA AGGCGCTGTATGAGGAGATCGACAAGGCTTCGCCTGCCGCCAAGCCGGCGGCCGTGACCGCGACGCCGGCCAACGTCTCC GTTGTCGTCAGCGCGCCCGGCCGCTCGCGCGACAATCCGGTCGAGGCGACGTTCCTGTCGCGGCGGCTGCTGAACAAGCC GGGCTCGGAGAAGGAGACCTGGCACATCGAGTTCGATCTCGCGGAGGCCGGGCTCGACTACGTCGTCGGCGATTCCTTCG GCATCTTTGCCAAGAACGATCTCGGCCTCGTCGACCAGATCATCGCGTTGCTCGGCGCCTCGCACATGACCGAGGTCAAC GGCAAGCCGCTGCGGCAGTGCCTGCTCGAGGACGTCTCGCTGTCACCGGCGCCGGATTCGCTATTCGAGCTGATCTCCTT CATCACCGGCGGCGCCACGCGCGAGAAGGCGCGGCGGCTGGCGCAGGGCGAGGATCCCGATGGCGATGCCGCGACGCTCG ACGTCATGGCTGTGCTGCAGAAGTTCTCCGGCGTCCGGCCGCATCCGGAAGCGTTCGTCGAGGCGCTGGAGCCGCTGCAG CCGCGGCTGTACTCGATCTCCTCGTCGCACAACGCCACGCCCGGCAAACTCTCGCTCACCGTCGACTGCGTCCGCTACGT CATCGGCAAGCGCAAGCGGCTTGGCCTTGCCTCGACGTTCCTCGCCGAGCGTATCAATCCCGGCGACAGACTGCGCGTCT ACGTGCAGAAGGCGCACGGCTTTGCACTGCCGGCCGATCCGAAGACGCCGATCATCATGGTCGGCCCGGGCACCGGCATC GCGCCGTTCCGCGCCTTCCTGCATGATCGCAGGGCGACCGGTGCGCCGGGCAAGAACTGGCTGTTCTTCGGCCACCAGCG CAGCGACTGCGACTTCTTCTACGCCGATGAGCTCAATGCGATGAAGACCTCTGGCCTGTTGACGCGGCTGTCGCTGGCGT GGTCGCGCGACGGCGACAAGAAGTTCTACGTCCAGGACCGCATGCGCGAGGTCGGTCGCGAGGTGTGGACCTGGCTCGCC GGCGGCGCGCATCTCTACATCTGCGGCGACGCTAAGCGCATGGCCAAGGATGTCGAGCGCGCGCTCGTCGACATCGTCGC CCAGTTCGGCGCCCGCTCGACCGACGAGGCCGTCAGCTTCGTCGCGGACCTCAAGAAGAAAGGCCGGTTCCAGCTGGACG TTTATTAA
Upstream 100 bases:
>100_bases GCACTTCGCCGGAAGAGACCTTCTTGTCGTTTGCCCGCCGCCATGACGGCGACGCTCTTCGCAAGCTCGCCGAAGCCCAG ACCTCGTCCGAGGTGTCAGC
Downstream 100 bases:
>100_bases CCCGCCGGAACCTCAAGAAAGGCGGCGGATAAAATTCTCGGCCGGAACTCCGGCCGAGAATGTTTTGGTTCCCTGCAGAT CCGAAACAGGAGTCTTGTCG
Product: sulfite reductase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MNQITPMPKLEIIPPTAPFSEAQRSWLNGFLAGALGLDGSTPLAPAQNGTALAPAGDGDDGEAPWHDQTMPITERMKLAE GRPLRRRMMAAMAQQDCGQCGYNCSDYSDAIADHSETRLNLCVPGGKETARMLKALYEEIDKASPAAKPAAVTATPANVS VVVSAPGRSRDNPVEATFLSRRLLNKPGSEKETWHIEFDLAEAGLDYVVGDSFGIFAKNDLGLVDQIIALLGASHMTEVN GKPLRQCLLEDVSLSPAPDSLFELISFITGGATREKARRLAQGEDPDGDAATLDVMAVLQKFSGVRPHPEAFVEALEPLQ PRLYSISSSHNATPGKLSLTVDCVRYVIGKRKRLGLASTFLAERINPGDRLRVYVQKAHGFALPADPKTPIIMVGPGTGI APFRAFLHDRRATGAPGKNWLFFGHQRSDCDFFYADELNAMKTSGLLTRLSLAWSRDGDKKFYVQDRMREVGREVWTWLA GGAHLYICGDAKRMAKDVERALVDIVAQFGARSTDEAVSFVADLKKKGRFQLDVY
Sequences:
>Translated_535_residues MNQITPMPKLEIIPPTAPFSEAQRSWLNGFLAGALGLDGSTPLAPAQNGTALAPAGDGDDGEAPWHDQTMPITERMKLAE GRPLRRRMMAAMAQQDCGQCGYNCSDYSDAIADHSETRLNLCVPGGKETARMLKALYEEIDKASPAAKPAAVTATPANVS VVVSAPGRSRDNPVEATFLSRRLLNKPGSEKETWHIEFDLAEAGLDYVVGDSFGIFAKNDLGLVDQIIALLGASHMTEVN GKPLRQCLLEDVSLSPAPDSLFELISFITGGATREKARRLAQGEDPDGDAATLDVMAVLQKFSGVRPHPEAFVEALEPLQ PRLYSISSSHNATPGKLSLTVDCVRYVIGKRKRLGLASTFLAERINPGDRLRVYVQKAHGFALPADPKTPIIMVGPGTGI APFRAFLHDRRATGAPGKNWLFFGHQRSDCDFFYADELNAMKTSGLLTRLSLAWSRDGDKKFYVQDRMREVGREVWTWLA GGAHLYICGDAKRMAKDVERALVDIVAQFGARSTDEAVSFVADLKKKGRFQLDVY >Mature_535_residues MNQITPMPKLEIIPPTAPFSEAQRSWLNGFLAGALGLDGSTPLAPAQNGTALAPAGDGDDGEAPWHDQTMPITERMKLAE GRPLRRRMMAAMAQQDCGQCGYNCSDYSDAIADHSETRLNLCVPGGKETARMLKALYEEIDKASPAAKPAAVTATPANVS VVVSAPGRSRDNPVEATFLSRRLLNKPGSEKETWHIEFDLAEAGLDYVVGDSFGIFAKNDLGLVDQIIALLGASHMTEVN GKPLRQCLLEDVSLSPAPDSLFELISFITGGATREKARRLAQGEDPDGDAATLDVMAVLQKFSGVRPHPEAFVEALEPLQ PRLYSISSSHNATPGKLSLTVDCVRYVIGKRKRLGLASTFLAERINPGDRLRVYVQKAHGFALPADPKTPIIMVGPGTGI APFRAFLHDRRATGAPGKNWLFFGHQRSDCDFFYADELNAMKTSGLLTRLSLAWSRDGDKKFYVQDRMREVGREVWTWLA GGAHLYICGDAKRMAKDVERALVDIVAQFGARSTDEAVSFVADLKKKGRFQLDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=399, Percent_Identity=32.5814536340852, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI7657393, Length=408, Percent_Identity=30.3921568627451, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI24041029, Length=392, Percent_Identity=32.3979591836735, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI221316705, Length=407, Percent_Identity=29.7297297297297, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI221316709, Length=398, Percent_Identity=30.1507537688442, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI169790956, Length=410, Percent_Identity=29.7560975609756, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI169790958, Length=410, Percent_Identity=29.7560975609756, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI10835173, Length=405, Percent_Identity=30.3703703703704, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI40254422, Length=410, Percent_Identity=30.7317073170732, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI221316707, Length=355, Percent_Identity=29.5774647887324, Blast_Score=129, Evalue=7e-30, Organism=Escherichia coli, GI1789123, Length=416, Percent_Identity=40.8653846153846, Blast_Score=296, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17554134, Length=402, Percent_Identity=30.8457711442786, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17566446, Length=285, Percent_Identity=30.5263157894737, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17531441, Length=317, Percent_Identity=31.5457413249211, Blast_Score=102, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6321143, Length=377, Percent_Identity=29.7082228116711, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321832, Length=423, Percent_Identity=29.3144208037825, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6325305, Length=270, Percent_Identity=27.4074074074074, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI17137192, Length=399, Percent_Identity=31.5789473684211, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24582192, Length=399, Percent_Identity=31.5789473684211, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI78706872, Length=380, Percent_Identity=31.3157894736842, Blast_Score=148, Evalue=9e-36, Organism=Drosophila melanogaster, GI24583543, Length=380, Percent_Identity=31.3157894736842, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI78706876, Length=380, Percent_Identity=31.3157894736842, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24660907, Length=232, Percent_Identity=30.1724137931034, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24660903, Length=232, Percent_Identity=30.1724137931034, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 58273; Mature: 58273
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQITPMPKLEIIPPTAPFSEAQRSWLNGFLAGALGLDGSTPLAPAQNGTALAPAGDGDD CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC GEAPWHDQTMPITERMKLAEGRPLRRRMMAAMAQQDCGQCGYNCSDYSDAIADHSETRLN CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE LCVPGGKETARMLKALYEEIDKASPAAKPAAVTATPANVSVVVSAPGRSRDNPVEATFLS EECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHH RRLLNKPGSEKETWHIEFDLAEAGLDYVVGDSFGIFAKNDLGLVDQIIALLGASHMTEVN HHHHCCCCCCCCEEEEEEEHHHCCCCEEECCCCCEEECCCCCHHHHHHHHHCCHHHHCCC GKPLRQCLLEDVSLSPAPDSLFELISFITGGATREKARRLAQGEDPDGDAATLDVMAVLQ CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH KFSGVRPHPEAFVEALEPLQPRLYSISSSHNATPGKLSLTVDCVRYVIGKRKRLGLASTF HHCCCCCCHHHHHHHHHCCCHHHEEECCCCCCCCCEEEEHHHHHHHHHCCCHHCCHHHHH LAERINPGDRLRVYVQKAHGFALPADPKTPIIMVGPGTGIAPFRAFLHDRRATGAPGKNW HHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCE LFFGHQRSDCDFFYADELNAMKTSGLLTRLSLAWSRDGDKKFYVQDRMREVGREVWTWLA EEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHC GGAHLYICGDAKRMAKDVERALVDIVAQFGARSTDEAVSFVADLKKKGRFQLDVY CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MNQITPMPKLEIIPPTAPFSEAQRSWLNGFLAGALGLDGSTPLAPAQNGTALAPAGDGDD CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC GEAPWHDQTMPITERMKLAEGRPLRRRMMAAMAQQDCGQCGYNCSDYSDAIADHSETRLN CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE LCVPGGKETARMLKALYEEIDKASPAAKPAAVTATPANVSVVVSAPGRSRDNPVEATFLS EECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHH RRLLNKPGSEKETWHIEFDLAEAGLDYVVGDSFGIFAKNDLGLVDQIIALLGASHMTEVN HHHHCCCCCCCCEEEEEEEHHHCCCCEEECCCCCEEECCCCCHHHHHHHHHCCHHHHCCC GKPLRQCLLEDVSLSPAPDSLFELISFITGGATREKARRLAQGEDPDGDAATLDVMAVLQ CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH KFSGVRPHPEAFVEALEPLQPRLYSISSSHNATPGKLSLTVDCVRYVIGKRKRLGLASTF HHCCCCCCHHHHHHHHHCCCHHHEEECCCCCCCCCEEEEHHHHHHHHHCCCHHCCHHHHH LAERINPGDRLRVYVQKAHGFALPADPKTPIIMVGPGTGIAPFRAFLHDRRATGAPGKNW HHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCE LFFGHQRSDCDFFYADELNAMKTSGLLTRLSLAWSRDGDKKFYVQDRMREVGREVWTWLA EEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHC GGAHLYICGDAKRMAKDVERALVDIVAQFGARSTDEAVSFVADLKKKGRFQLDVY CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]