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The map label for this gene is visC [C]

Identifier: 146340727

GI number: 146340727

Start: 3951605

End: 3952819

Strand: Reverse

Name: visC [C]

Synonym: BRADO3780

Alternate gene names: 146340727

Gene position: 3952819-3951605 (Counterclockwise)

Preceding gene: 146340731

Following gene: 146340725

Centisome position: 53.01

GC content: 69.63

Gene sequence:

>1215_bases
ATGACCCAGGCAGACACCAGCTCCGAACACACCAGCTTCGACGTCATCGTCGTCGGCGGCGGCCCCGCGGGGCTCGCGGC
CGCGATCGCGCTTGCGCAGACCGGCGCCCGGACCGCGCTCGTCGCCCGGCATGCCCCCTATGCGGACAACCGCACCACCG
CCCTGCTCGGCGGCTCGGTCGATTTTCTCGACGAGATCGGCGTCTGGTCGTCGTGCCGTGATCGCGCCGCCGGCCTGAAG
ACGATGCGGCTGGTCGACGATACCGGCCGGCTGATCCGCGCGCCCGAGGTGCGGTTCGTCGCCGAGGAGATCGGGCTCGA
CGTGTTCGGCTACAACATCGCCAATGCGGTGCTGGTCGAAGCGCTTGAAAAGCGCGCCGCCGAGATCAACGAATTGGTGC
GGATCGCGGAGGACGCGGAAAGCGTTCAGAGCGGCATTGATGCGGTCACCGTCACCACTGCGTCCGGCCACATGCTGAGC
GCGGCGCTCGTGGTTGGCGCCGACGGCCGGCATTCGCTGTGCCGCGAGGCGGCCGGCATCGGCGTCAGCCGGCGTCCGCT
GCAGCAGGCGGCGCTGACGTTCAACATCAGCCACGCGCGCCCGCACCATAACGTCTCGACGGAATTCCACACACCACACG
GTCCGTGCGTATTCGTACCGTTGCCCGGCGACCGCTGCAGCGTCGTATGGGTGGCTTCGCCGAAGGACGTGGAGCGACTG
CAGGGGCTCGACGACGACGCGCTGTCGGCGGCGGCCGAGCGGCAATCGCATTCGATCTTCGGCCGTGTCCATGTCGAGCC
CGGCCGTCATGTGTTTCCGCTCGCGATCGAGCGGCCGCAACGCTACGCGCAGAACCGCATCGCTCTGATCGGCGAGGCCG
CGCATGTGGTGCCGCCGATCGGCGCGCAGGGCCTCAATCTCGGACTGCGCGACGGCATCGACATCGCTGCCGTCGTGGCC
AAGGCCAAGGCGGCCGGCGAGGATCCCGGCGCACAGCAGGTGATCGCCCGCTATGGCGCCGCGCGCCGCGCCGATATCCT
GAGCCGTACCTTCGTGATCGACGTCGCCAATCGCTCGCTGCTCAGCGACCTCCTGCCGATGCAGTCGGTACGCGCGGTCG
GCATGCATCTGATCGGCGGCATCGGGCCGCTGCGGCGGCTGGCGATGCGTGAGGGTCTGGCGCCGTCCTGGCGCACGTCC
CGCAAGGCCGGCTGA

Upstream 100 bases:

>100_bases
GGAATCGGAGCGAATTGCATATCGCCGCTTGCGGCGATGCGCCGCGCAGGCGCGCGGGATCACTCTTGAAAATGCCGGCG
GGAACGTCAAATGTTCCGGC

Downstream 100 bases:

>100_bases
GAGCGGACTACGGGAACGCCAGCCGGCCGCTCTGGATCAGCCACATCGCCGTCGTGAGTGTCAGGACGGAAGCGAAGGTG
CCGATCAGCACTGCCGATGA

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTQADTSSEHTSFDVIVVGGGPAGLAAAIALAQTGARTALVARHAPYADNRTTALLGGSVDFLDEIGVWSSCRDRAAGLK
TMRLVDDTGRLIRAPEVRFVAEEIGLDVFGYNIANAVLVEALEKRAAEINELVRIAEDAESVQSGIDAVTVTTASGHMLS
AALVVGADGRHSLCREAAGIGVSRRPLQQAALTFNISHARPHHNVSTEFHTPHGPCVFVPLPGDRCSVVWVASPKDVERL
QGLDDDALSAAAERQSHSIFGRVHVEPGRHVFPLAIERPQRYAQNRIALIGEAAHVVPPIGAQGLNLGLRDGIDIAAVVA
KAKAAGEDPGAQQVIARYGAARRADILSRTFVIDVANRSLLSDLLPMQSVRAVGMHLIGGIGPLRRLAMREGLAPSWRTS
RKAG

Sequences:

>Translated_404_residues
MTQADTSSEHTSFDVIVVGGGPAGLAAAIALAQTGARTALVARHAPYADNRTTALLGGSVDFLDEIGVWSSCRDRAAGLK
TMRLVDDTGRLIRAPEVRFVAEEIGLDVFGYNIANAVLVEALEKRAAEINELVRIAEDAESVQSGIDAVTVTTASGHMLS
AALVVGADGRHSLCREAAGIGVSRRPLQQAALTFNISHARPHHNVSTEFHTPHGPCVFVPLPGDRCSVVWVASPKDVERL
QGLDDDALSAAAERQSHSIFGRVHVEPGRHVFPLAIERPQRYAQNRIALIGEAAHVVPPIGAQGLNLGLRDGIDIAAVVA
KAKAAGEDPGAQQVIARYGAARRADILSRTFVIDVANRSLLSDLLPMQSVRAVGMHLIGGIGPLRRLAMREGLAPSWRTS
RKAG
>Mature_403_residues
TQADTSSEHTSFDVIVVGGGPAGLAAAIALAQTGARTALVARHAPYADNRTTALLGGSVDFLDEIGVWSSCRDRAAGLKT
MRLVDDTGRLIRAPEVRFVAEEIGLDVFGYNIANAVLVEALEKRAAEINELVRIAEDAESVQSGIDAVTVTTASGHMLSA
ALVVGADGRHSLCREAAGIGVSRRPLQQAALTFNISHARPHHNVSTEFHTPHGPCVFVPLPGDRCSVVWVASPKDVERLQ
GLDDDALSAAAERQSHSIFGRVHVEPGRHVFPLAIERPQRYAQNRIALIGEAAHVVPPIGAQGLNLGLRDGIDIAAVVAK
AKAAGEDPGAQQVIARYGAARRADILSRTFVIDVANRSLLSDLLPMQSVRAVGMHLIGGIGPLRRLAMREGLAPSWRTSR
KAG

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=408, Percent_Identity=24.2647058823529, Blast_Score=109, Evalue=5e-24,
Organism=Escherichia coli, GI1789273, Length=400, Percent_Identity=30.25, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1786883, Length=389, Percent_Identity=29.5629820051414, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1789274, Length=387, Percent_Identity=29.7157622739018, Blast_Score=141, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI25146631, Length=433, Percent_Identity=25.1732101616628, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920760, Length=437, Percent_Identity=26.0869565217391, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42766; Mature: 42635

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQADTSSEHTSFDVIVVGGGPAGLAAAIALAQTGARTALVARHAPYADNRTTALLGGSV
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCH
DFLDEIGVWSSCRDRAAGLKTMRLVDDTGRLIRAPEVRFVAEEIGLDVFGYNIANAVLVE
HHHHHCCCCHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHCCEEECHHHHHHHHHH
ALEKRAAEINELVRIAEDAESVQSGIDAVTVTTASGHMLSAALVVGADGRHSLCREAAGI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCC
GVSRRPLQQAALTFNISHARPHHNVSTEFHTPHGPCVFVPLPGDRCSVVWVASPKDVERL
CCCCCHHHHHHEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEECCHHHHHH
QGLDDDALSAAAERQSHSIFGRVHVEPGRHVFPLAIERPQRYAQNRIALIGEAAHVVPPI
CCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHCCCEEEEECCHHHCCCC
GAQGLNLGLRDGIDIAAVVAKAKAAGEDPGAQQVIARYGAARRADILSRTFVIDVANRSL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHEEEEEHHHHHH
LSDLLPMQSVRAVGMHLIGGIGPLRRLAMREGLAPSWRTSRKAG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TQADTSSEHTSFDVIVVGGGPAGLAAAIALAQTGARTALVARHAPYADNRTTALLGGSV
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCH
DFLDEIGVWSSCRDRAAGLKTMRLVDDTGRLIRAPEVRFVAEEIGLDVFGYNIANAVLVE
HHHHHCCCCHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHCCEEECHHHHHHHHHH
ALEKRAAEINELVRIAEDAESVQSGIDAVTVTTASGHMLSAALVVGADGRHSLCREAAGI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCC
GVSRRPLQQAALTFNISHARPHHNVSTEFHTPHGPCVFVPLPGDRCSVVWVASPKDVERL
CCCCCHHHHHHEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCCEEEEEEECCHHHHHH
QGLDDDALSAAAERQSHSIFGRVHVEPGRHVFPLAIERPQRYAQNRIALIGEAAHVVPPI
CCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHCCCEEEEECCHHHCCCC
GAQGLNLGLRDGIDIAAVVAKAKAAGEDPGAQQVIARYGAARRADILSRTFVIDVANRSL
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHEEEEEHHHHHH
LSDLLPMQSVRAVGMHLIGGIGPLRRLAMREGLAPSWRTSRKAG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]