Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340716
Identifier: 146340716
GI number: 146340716
Start: 3935122
End: 3935937
Strand: Direct
Name: 146340716
Synonym: BRADO3768
Alternate gene names: NA
Gene position: 3935122-3935937 (Clockwise)
Preceding gene: 146340715
Following gene: 146340718
Centisome position: 52.77
GC content: 69.24
Gene sequence:
>816_bases ATGGGCAGCGCCATCGCCGCCCGTCTCAATGAGCACGGCTGCAAGGTGCTGACGCTGCTCGACGGCCGCAGCGCCGCGAC GCGCGCGCGGGCGGCCGCGTCCGGCATGACGGGCGCCAGCGAGTCCGAGATCGCCAGCTGCGACATCATCCTGTCGATCG TGCCGCCGGGCGAGGCAGTGGCGTTGGCCGAGCAGCTCGCCACCGTGATCAATCGTTCGACGAAGAAGCCGGTGATCGTC GACTGCAACGCCGTCAACGTCGAGACGATCCGGACCATCGAGGACATCGTGCTGTCCTCCGGCGCGCGCCTCGTGGATGC CGCCATCATCGGCCTGCCGCCGAAGCCCGGCACGAAGGGACCGGCCTTGTACGTCAGCGGCGAGGCGTCGGGGGAAATCG CCGTGCTCGGCCAGCTCGGGCTCGATTTGCGCCAAATCGAGGGACCGATCGGCGCCGCCTCGGCGCTGAAGATGTCCTAT GCCGGGATCAACAAGGGCCTGACCGGGCTCGGCGCCGCGATGGTGCTGGCCGCCACCCGCGCCGGCGCGGCGGATGCCTT GCGCGACGAGCTCGCGTCGAGCCTGCCGCACGTTCAGGCGCGGCTCGCTAACGCGCTGCCGGACATGCTGCCCAAGGCCT ATCGTTGGGTCGCCGAGATGCGCGAGATCGCAGGCTTCCTGGGCGAGGATCATCCGGCGGCGCTGATCTACGAAGGCTTT GCGCAACTGTTCGAGCACATCGCGGCGGACGTGCAGGGCGAGGGCTTCGATGCGGCGCAGCTGGTGGCATTCGCGGAGAG CTGCAAGGCGAAATAG
Upstream 100 bases:
>100_bases TCATCGGCTGCGCATAGTCTGCGGGACGCTTCTTGGAGTTGAATCTTGGAATTGGAGTCCGCCCATGCCCCCCAGCATTG CCGTCATCGCGCCCGGCGCC
Downstream 100 bases:
>100_bases ACGATTTCAGCTCGTCGTTCCGGGCAAGCCACGACGCGCGAAGCGCGTCGCGGCGCCGACCCGGGGCCCATACGCCGCAG TGGTTGCGAGGTGCGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphogluconate Dehydrogenase; Conserved Protein; 6-Phosphogluconatedehydrogenase Protein; 6-Phosphogluconate Dehydrogenase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MGSAIAARLNEHGCKVLTLLDGRSAATRARAAASGMTGASESEIASCDIILSIVPPGEAVALAEQLATVINRSTKKPVIV DCNAVNVETIRTIEDIVLSSGARLVDAAIIGLPPKPGTKGPALYVSGEASGEIAVLGQLGLDLRQIEGPIGAASALKMSY AGINKGLTGLGAAMVLAATRAGAADALRDELASSLPHVQARLANALPDMLPKAYRWVAEMREIAGFLGEDHPAALIYEGF AQLFEHIAADVQGEGFDAAQLVAFAESCKAK
Sequences:
>Translated_271_residues MGSAIAARLNEHGCKVLTLLDGRSAATRARAAASGMTGASESEIASCDIILSIVPPGEAVALAEQLATVINRSTKKPVIV DCNAVNVETIRTIEDIVLSSGARLVDAAIIGLPPKPGTKGPALYVSGEASGEIAVLGQLGLDLRQIEGPIGAASALKMSY AGINKGLTGLGAAMVLAATRAGAADALRDELASSLPHVQARLANALPDMLPKAYRWVAEMREIAGFLGEDHPAALIYEGF AQLFEHIAADVQGEGFDAAQLVAFAESCKAK >Mature_270_residues GSAIAARLNEHGCKVLTLLDGRSAATRARAAASGMTGASESEIASCDIILSIVPPGEAVALAEQLATVINRSTKKPVIVD CNAVNVETIRTIEDIVLSSGARLVDAAIIGLPPKPGTKGPALYVSGEASGEIAVLGQLGLDLRQIEGPIGAASALKMSYA GINKGLTGLGAAMVLAATRAGAADALRDELASSLPHVQARLANALPDMLPKAYRWVAEMREIAGFLGEDHPAALIYEGFA QLFEHIAADVQGEGFDAAQLVAFAESCKAK
Specific function: Unknown
COG id: COG2084
COG function: function code I; 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27822; Mature: 27691
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAIAARLNEHGCKVLTLLDGRSAATRARAAASGMTGASESEIASCDIILSIVPPGEAV CCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHCEEEEEEEECCCCHHH ALAEQLATVINRSTKKPVIVDCNAVNVETIRTIEDIVLSSGARLVDAAIIGLPPKPGTKG HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEHHHEEECCCCCCCCC PALYVSGEASGEIAVLGQLGLDLRQIEGPIGAASALKMSYAGINKGLTGLGAAMVLAATR CEEEEECCCCCCEEEEEHHCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGAADALRDELASSLPHVQARLANALPDMLPKAYRWVAEMREIAGFLGEDHPAALIYEGF CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AQLFEHIAADVQGEGFDAAQLVAFAESCKAK HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GSAIAARLNEHGCKVLTLLDGRSAATRARAAASGMTGASESEIASCDIILSIVPPGEAV CCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHCEEEEEEEECCCCHHH ALAEQLATVINRSTKKPVIVDCNAVNVETIRTIEDIVLSSGARLVDAAIIGLPPKPGTKG HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEHHHEEECCCCCCCCC PALYVSGEASGEIAVLGQLGLDLRQIEGPIGAASALKMSYAGINKGLTGLGAAMVLAATR CEEEEECCCCCCEEEEEHHCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AGAADALRDELASSLPHVQARLANALPDMLPKAYRWVAEMREIAGFLGEDHPAALIYEGF CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AQLFEHIAADVQGEGFDAAQLVAFAESCKAK HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA