| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hemA [H]
Identifier: 146340550
GI number: 146340550
Start: 3785771
End: 3787003
Strand: Direct
Name: hemA [H]
Synonym: BRADO3594
Alternate gene names: 146340550
Gene position: 3785771-3787003 (Clockwise)
Preceding gene: 146340546
Following gene: 146340551
Centisome position: 50.77
GC content: 65.94
Gene sequence:
>1233_bases GTGAAGAACTACGACCGCTATTTCGACCATGCCCTCGATCAGCTCCACCAGGAGCGCCGCTACCGCGTGTTCGCCGACCT CGAGCGCCGTGCCGGCCGGTTTCCGCACGCGATCTGGCATTCGCCCGAAGGTCCGCGGGATGTGGTGATCTGGTGCTCCA ACGATTATCTCGGGATGGGACAGCATCCGAAGGTGATCGGCGCGATGGTCGATGTGGCCGCGCGCATGGGCACCGGCGCG GGCGGCACCCGAAACATCGCCGGCACCAACCACCCGCTGGTCGAGCTCGAACGCGAGCTCGCCGATCTCCACGGCAAGGA GGCGGCGCTGGTGTTCACCTCGGGCTACGTCTCCAACGAGACCGGTATCTCGACGATCGCCAAGCTGTTGTCGAATTGCC TGCTGCTGTCCGACGCGCTGAACCACAATTCGATGATCGAAGGCGTGCGCAAGGCCGGCACGGAGAAGCAGGTGTGGCGG CACAATGATCTGGCGCACCTCGAGGAGCTGCTGCAGGCGGCCGATCCCGACCGGCCCAAGCTGATCGTCTGCGAGAGTCT GTATTCGATGGACGGTGATGTCGCGCCCCTGCATCGGATCTGCGATCTCGCCGATCGCTACGGCGCGTTGACCTATGTCG ACGAGGTCCATGCTGTCGGCATGTATGGCCCGCGTGGCGGCGGCATTGCCGAGCGCGACGGCGCGATGGCCCGCATCGAT ATCCTTGAAGGCACCCTGGCGAAAGCGTTCGGCTGCCTGGGCGGCTACATCGCCGCCAATGCCAATTTGATCGATGCCGT CAGGTCCTACGCCCCGGGCTTCATTTTCACTACGGCCCTGCCGCCGCCGGTCTGCGCCGCGGCAACCGCCGCGATCCGGC ATCTGAAGACCTCGCAATGGGAGCGCGACCGGCATCAGGACCGTGCCGCCCGGCTCAAGGCGGTGCTGAACGCGTCAGGC TTGCCGGTGATGCCTTCGGATACTCACATCGTCCCGGTCCATGTCGGCGATCCCGAGAAGTGCAAGAGCGCCTCCGACCT GCTCCTGGCAGAGCACGGCATCTACATCCAGCCGATCAACTACCCGACGGTACCGCGCGGTCTGGAGCGGCTGCGGATCA CCCCGTCGCCGTACCATGATGATGGCCTGATCGATGCGCTGGCGGAAGCGCTGGTCGACGTCTGGGACCGGCTCGGCCTG CCGCGCGCCGCGCAGGCGATGGCCGCGGAGTAG
Upstream 100 bases:
>100_bases GAACGCCTTGCATAACTGGGCTTTTGTCCCATCCGGAACAAACCTTTAGGGGCGCGCCGCAACGCTGGCGCTGGCCGCCG GGCAGGGGAAGGACGACCAG
Downstream 100 bases:
>100_bases GTCTGTCCGACTGTTTTGTCAGGCGACCCTGTCAAGTTTGATCTGCCGCAATGCCGCCCGCGCCCGCGCGGGCGTAATCT TTTCTGAAGAGGGGAACATG
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKNYDRYFDHALDQLHQERRYRVFADLERRAGRFPHAIWHSPEGPRDVVIWCSNDYLGMGQHPKVIGAMVDVAARMGTGA GGTRNIAGTNHPLVELERELADLHGKEAALVFTSGYVSNETGISTIAKLLSNCLLLSDALNHNSMIEGVRKAGTEKQVWR HNDLAHLEELLQAADPDRPKLIVCESLYSMDGDVAPLHRICDLADRYGALTYVDEVHAVGMYGPRGGGIAERDGAMARID ILEGTLAKAFGCLGGYIAANANLIDAVRSYAPGFIFTTALPPPVCAAATAAIRHLKTSQWERDRHQDRAARLKAVLNASG LPVMPSDTHIVPVHVGDPEKCKSASDLLLAEHGIYIQPINYPTVPRGLERLRITPSPYHDDGLIDALAEALVDVWDRLGL PRAAQAMAAE
Sequences:
>Translated_410_residues MKNYDRYFDHALDQLHQERRYRVFADLERRAGRFPHAIWHSPEGPRDVVIWCSNDYLGMGQHPKVIGAMVDVAARMGTGA GGTRNIAGTNHPLVELERELADLHGKEAALVFTSGYVSNETGISTIAKLLSNCLLLSDALNHNSMIEGVRKAGTEKQVWR HNDLAHLEELLQAADPDRPKLIVCESLYSMDGDVAPLHRICDLADRYGALTYVDEVHAVGMYGPRGGGIAERDGAMARID ILEGTLAKAFGCLGGYIAANANLIDAVRSYAPGFIFTTALPPPVCAAATAAIRHLKTSQWERDRHQDRAARLKAVLNASG LPVMPSDTHIVPVHVGDPEKCKSASDLLLAEHGIYIQPINYPTVPRGLERLRITPSPYHDDGLIDALAEALVDVWDRLGL PRAAQAMAAE >Mature_410_residues MKNYDRYFDHALDQLHQERRYRVFADLERRAGRFPHAIWHSPEGPRDVVIWCSNDYLGMGQHPKVIGAMVDVAARMGTGA GGTRNIAGTNHPLVELERELADLHGKEAALVFTSGYVSNETGISTIAKLLSNCLLLSDALNHNSMIEGVRKAGTEKQVWR HNDLAHLEELLQAADPDRPKLIVCESLYSMDGDVAPLHRICDLADRYGALTYVDEVHAVGMYGPRGGGIAERDGAMARID ILEGTLAKAFGCLGGYIAANANLIDAVRSYAPGFIFTTALPPPVCAAATAAIRHLKTSQWERDRHQDRAARLKAVLNASG LPVMPSDTHIVPVHVGDPEKCKSASDLLLAEHGIYIQPINYPTVPRGLERLRITPSPYHDDGLIDALAEALVDVWDRLGL PRAAQAMAAE
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977442, Length=411, Percent_Identity=49.1484184914842, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI83977440, Length=411, Percent_Identity=49.1484184914842, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI83977444, Length=411, Percent_Identity=49.1484184914842, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI4502025, Length=402, Percent_Identity=50.2487562189055, Blast_Score=411, Evalue=1e-115, Organism=Homo sapiens, GI40316939, Length=402, Percent_Identity=50.2487562189055, Blast_Score=411, Evalue=1e-115, Organism=Homo sapiens, GI7657118, Length=348, Percent_Identity=35.9195402298851, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI284448556, Length=348, Percent_Identity=35.9195402298851, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI119220554, Length=408, Percent_Identity=29.4117647058824, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4758668, Length=395, Percent_Identity=27.8481012658228, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI5454084, Length=248, Percent_Identity=25.4032258064516, Blast_Score=104, Evalue=2e-22, Organism=Escherichia coli, GI1790046, Length=356, Percent_Identity=34.8314606741573, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1786993, Length=348, Percent_Identity=29.8850574712644, Blast_Score=143, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71994529, Length=358, Percent_Identity=34.3575418994413, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI32566772, Length=374, Percent_Identity=28.6096256684492, Blast_Score=141, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17560914, Length=387, Percent_Identity=27.906976744186, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17560912, Length=387, Percent_Identity=27.906976744186, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71982617, Length=229, Percent_Identity=27.9475982532751, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71982625, Length=229, Percent_Identity=27.9475982532751, Blast_Score=105, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320438, Length=422, Percent_Identity=47.6303317535545, Blast_Score=396, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6320267, Length=368, Percent_Identity=30.7065217391304, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323954, Length=263, Percent_Identity=23.574144486692, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI17137420, Length=401, Percent_Identity=46.3840399002494, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24662918, Length=354, Percent_Identity=34.7457627118644, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136286, Length=373, Percent_Identity=28.1501340482574, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24653280, Length=257, Percent_Identity=24.5136186770428, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24653276, Length=257, Percent_Identity=24.5136186770428, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24653278, Length=257, Percent_Identity=24.5136186770428, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 44821; Mature: 44821
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYDRYFDHALDQLHQERRYRVFADLERRAGRFPHAIWHSPEGPRDVVIWCSNDYLGMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCC QHPKVIGAMVDVAARMGTGAGGTRNIAGTNHPLVELERELADLHGKEAALVFTSGYVSNE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC TGISTIAKLLSNCLLLSDALNHNSMIEGVRKAGTEKQVWRHNDLAHLEELLQAADPDRPK CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCCC LIVCESLYSMDGDVAPLHRICDLADRYGALTYVDEVHAVGMYGPRGGGIAERDGAMARID EEEEHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEH ILEGTLAKAFGCLGGYIAANANLIDAVRSYAPGFIFTTALPPPVCAAATAAIRHLKTSQW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH ERDRHQDRAARLKAVLNASGLPVMPSDTHIVPVHVGDPEKCKSASDLLLAEHGIYIQPIN HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHEECCCCEEEECC YPTVPRGLERLRITPSPYHDDGLIDALAEALVDVWDRLGLPRAAQAMAAE CCCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MKNYDRYFDHALDQLHQERRYRVFADLERRAGRFPHAIWHSPEGPRDVVIWCSNDYLGMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCCC QHPKVIGAMVDVAARMGTGAGGTRNIAGTNHPLVELERELADLHGKEAALVFTSGYVSNE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCC TGISTIAKLLSNCLLLSDALNHNSMIEGVRKAGTEKQVWRHNDLAHLEELLQAADPDRPK CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCCC LIVCESLYSMDGDVAPLHRICDLADRYGALTYVDEVHAVGMYGPRGGGIAERDGAMARID EEEEHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEH ILEGTLAKAFGCLGGYIAANANLIDAVRSYAPGFIFTTALPPPVCAAATAAIRHLKTSQW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH ERDRHQDRAARLKAVLNASGLPVMPSDTHIVPVHVGDPEKCKSASDLLLAEHGIYIQPIN HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHEECCCCEEEECC YPTVPRGLERLRITPSPYHDDGLIDALAEALVDVWDRLGLPRAAQAMAAE CCCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3609750; 12597275 [H]