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The map label for this gene is recJ [H]

Identifier: 146340534

GI number: 146340534

Start: 3769716

End: 3771557

Strand: Direct

Name: recJ [H]

Synonym: BRADO3577

Alternate gene names: 146340534

Gene position: 3769716-3771557 (Clockwise)

Preceding gene: 146340532

Following gene: 146340536

Centisome position: 50.56

GC content: 69.6

Gene sequence:

>1842_bases
ATGATGCTGTCCGCCGCCGCCTTGCCGACCAGCGCCCCCCAGGCGTTCCTCGGCGTGCGGCTGTCGCTGACCAACAAGCT
GTGGCGCGACCGGCTGGATACGCGCGGAGCGGCGCGGGCGCTCGCCATCGTGCAGCGCTACCAGCTTCCGGAGATGCTGG
CCCGGGTACTGGCCGGGCGCGATGTTGCGCTCGATGCCGTGCAGGACTTCCTCGACCCGACCATCCGCAAGCTGATGCCG
GATCCGTTCACCGTGACGCAGATGGAAGCGGCGGCCCAGCGCATCGCCGACGCCGCGGTGAAAGGCGAGAAGGTTGCGAT
CTTCGGCGACTACGACGTCGACGGCGCCACCTCGGCCGCGCTGCTGGCCTGGCACCTGCGCCATTGCGGGCTCGATCCGC
TGATCCACATTCCCGATCGCATCTTCGAGGGCTACGGCCCAAACACTGACGCCATCCGCGCGCTCGCCAATAAGGGTGCG
ACCCTGCTGGTGACCGTGGACTGCGGCACGACCAGCCTGGAGCCCTTGGCCGAGGCGCGGCGACTCGGCATGTCCGTGGT
CGTCATCGACCACCACCAATGCGGCGAGGAGCTGCCGGAGGTCGAGGCGCTGGTCAATCCGAACCGGCCCGACGATCTCT
CCGGTCTCGGTTATCTCGCCGCGGTCGGACTGACCTTTGTGACCCTGGTGGCGGTCAATCGAGAGCTGCGCAGCCGCGGC
TTTTGGAGCGGCACGCGGCCGGAGCCGGACCTGCTGTCGATGCTGCATCACGTCGCGCTCGGCACCGTCGCCGATGTCGC
GCCGCTGATCGCGCTGAACCGCGCCTTCGTGGCCAAGGGGCTGATCGCGATGCGGCGGCGCGATCACGTCGGCCACACCG
CGCTGATGGATGTCGCGCGCCTGAACGGTCCGCCCGAGGCGTGGCATCTTGGCTTCATGCTCGGGCCGCGCATCAATGCC
GGCGGCCGGATCGGCCGCGCCGATCTCGGCGTGCGGCTGCTGCTGGAGGGCGACGTTTCCGAAGCCGCGCGCATTGCCGC
TGAGCTCGACCGGCTCAACACCGAGCGCCGCGTCATCGAGCAGCAGGCCGAAGCGCAGGCCGAGGCTGAGGCGCTGGCCT
CGCTCGGCCTGGAGGACAAAGGCGCTGTCATCGTCACCGCGTCGGAAGGCTGGCATCCCGGGGTGGTCGGGCTGGTGGCG
TCGCGGTTGAAGGAAAAGTTCGCGCGGCCGGCTTTCGCGATCGCGCTCGAGCCGGGCGGCATCGGCACGGGATCGGGGCG
CTCCATTCCCGGCGTCGATCTCGGCAAGGCGGTGCGTCACGCGGTGGAGCAGGGCCTGCTGATGAAGGGCGGCGGGCACG
CGATGGCCGCCGGCGTCACCTTGCGCAAGGAGCGGCTGGCGGAGTTTCGCGCCTATCTGGAAAACGCGCTCGCCGCCGAT
GTCGCCGAGGCGCGGCACGTCAACGAGATCCTGATCGACGGCGCGATCAGTGCGCGCGCTGCGACGCCGGAGCTGGTCAA
CACGCTCAACCGCGCCGGTCCGTTCGGCAGCGGCAATCCCGAGCCGATCGTGGCGCTGCCATCGCATCAGCTGGTCTATG
CCGACGAGGTCGGGCAGGCGCATCTCAAGCTGCGGTTCAAGTCCGGCGACGGCGCCACGGTGAATGCGATCGCGTTCCGC
TCGGTCGGCCAGAGGCTCGGCAACGCTCTGGTGCAGCATCGCGGCCAGGTCCTGCATGTCGCGGGGACCCTGACGGTCGA
TCGCTACCAGGGCGTCGAGCGCGTGCAACTGCGCGTGCTCGATGTCGCCGTGCCGGATCACGGTCCGGCAATGATCAGGT
AG

Upstream 100 bases:

>100_bases
CGGTGGGGTTTCCGTTGCGCGCCCTGATCCCCGAACCCCGTTGCTGTAGATTCGTCGCCTGATTCCGAATCAGCCTGCCG
CCCACGAGGCTTCGCGATCC

Downstream 100 bases:

>100_bases
CCTTTGGCCGGGGCGATCTGTTCGCATCGTCTCCTCAGCTCAGCGATGCATTCCGCTTTGGCGTTGATCACCGCTGTCAT
CGCCCGGCTTGACCGGGCGA

Product: putative single-stranded-DNA-specific exonuclease recJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MMLSAAALPTSAPQAFLGVRLSLTNKLWRDRLDTRGAARALAIVQRYQLPEMLARVLAGRDVALDAVQDFLDPTIRKLMP
DPFTVTQMEAAAQRIADAAVKGEKVAIFGDYDVDGATSAALLAWHLRHCGLDPLIHIPDRIFEGYGPNTDAIRALANKGA
TLLVTVDCGTTSLEPLAEARRLGMSVVVIDHHQCGEELPEVEALVNPNRPDDLSGLGYLAAVGLTFVTLVAVNRELRSRG
FWSGTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIAMRRRDHVGHTALMDVARLNGPPEAWHLGFMLGPRINA
GGRIGRADLGVRLLLEGDVSEAARIAAELDRLNTERRVIEQQAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVA
SRLKEKFARPAFAIALEPGGIGTGSGRSIPGVDLGKAVRHAVEQGLLMKGGGHAMAAGVTLRKERLAEFRAYLENALAAD
VAEARHVNEILIDGAISARAATPELVNTLNRAGPFGSGNPEPIVALPSHQLVYADEVGQAHLKLRFKSGDGATVNAIAFR
SVGQRLGNALVQHRGQVLHVAGTLTVDRYQGVERVQLRVLDVAVPDHGPAMIR

Sequences:

>Translated_613_residues
MMLSAAALPTSAPQAFLGVRLSLTNKLWRDRLDTRGAARALAIVQRYQLPEMLARVLAGRDVALDAVQDFLDPTIRKLMP
DPFTVTQMEAAAQRIADAAVKGEKVAIFGDYDVDGATSAALLAWHLRHCGLDPLIHIPDRIFEGYGPNTDAIRALANKGA
TLLVTVDCGTTSLEPLAEARRLGMSVVVIDHHQCGEELPEVEALVNPNRPDDLSGLGYLAAVGLTFVTLVAVNRELRSRG
FWSGTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIAMRRRDHVGHTALMDVARLNGPPEAWHLGFMLGPRINA
GGRIGRADLGVRLLLEGDVSEAARIAAELDRLNTERRVIEQQAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVA
SRLKEKFARPAFAIALEPGGIGTGSGRSIPGVDLGKAVRHAVEQGLLMKGGGHAMAAGVTLRKERLAEFRAYLENALAAD
VAEARHVNEILIDGAISARAATPELVNTLNRAGPFGSGNPEPIVALPSHQLVYADEVGQAHLKLRFKSGDGATVNAIAFR
SVGQRLGNALVQHRGQVLHVAGTLTVDRYQGVERVQLRVLDVAVPDHGPAMIR
>Mature_613_residues
MMLSAAALPTSAPQAFLGVRLSLTNKLWRDRLDTRGAARALAIVQRYQLPEMLARVLAGRDVALDAVQDFLDPTIRKLMP
DPFTVTQMEAAAQRIADAAVKGEKVAIFGDYDVDGATSAALLAWHLRHCGLDPLIHIPDRIFEGYGPNTDAIRALANKGA
TLLVTVDCGTTSLEPLAEARRLGMSVVVIDHHQCGEELPEVEALVNPNRPDDLSGLGYLAAVGLTFVTLVAVNRELRSRG
FWSGTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIAMRRRDHVGHTALMDVARLNGPPEAWHLGFMLGPRINA
GGRIGRADLGVRLLLEGDVSEAARIAAELDRLNTERRVIEQQAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVA
SRLKEKFARPAFAIALEPGGIGTGSGRSIPGVDLGKAVRHAVEQGLLMKGGGHAMAAGVTLRKERLAEFRAYLENALAAD
VAEARHVNEILIDGAISARAATPELVNTLNRAGPFGSGNPEPIVALPSHQLVYADEVGQAHLKLRFKSGDGATVNAIAFR
SVGQRLGNALVQHRGQVLHVAGTLTVDRYQGVERVQLRVLDVAVPDHGPAMIR

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=568, Percent_Identity=35.387323943662, Blast_Score=265, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65374; Mature: 65374

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSAAALPTSAPQAFLGVRLSLTNKLWRDRLDTRGAARALAIVQRYQLPEMLARVLAGR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
DVALDAVQDFLDPTIRKLMPDPFTVTQMEAAAQRIADAAVKGEKVAIFGDYDVDGATSAA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHH
LLAWHLRHCGLDPLIHIPDRIFEGYGPNTDAIRALANKGATLLVTVDCGTTSLEPLAEAR
HHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH
RLGMSVVVIDHHQCGEELPEVEALVNPNRPDDLSGLGYLAAVGLTFVTLVAVNRELRSRG
HCCCEEEEEECHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FWSGTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIAMRRRDHVGHTALMDVAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNTERRVIE
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHH
QQAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVASRLKEKFARPAFAIALEPGG
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
IGTGSGRSIPGVDLGKAVRHAVEQGLLMKGGGHAMAAGVTLRKERLAEFRAYLENALAAD
CCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
VAEARHVNEILIDGAISARAATPELVNTLNRAGPFGSGNPEPIVALPSHQLVYADEVGQA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCE
HLKLRFKSGDGATVNAIAFRSVGQRLGNALVQHRGQVLHVAGTLTVDRYQGVERVQLRVL
EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHCCHHHEEEEEE
DVAVPDHGPAMIR
EEECCCCCCCCCC
>Mature Secondary Structure
MMLSAAALPTSAPQAFLGVRLSLTNKLWRDRLDTRGAARALAIVQRYQLPEMLARVLAGR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
DVALDAVQDFLDPTIRKLMPDPFTVTQMEAAAQRIADAAVKGEKVAIFGDYDVDGATSAA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHH
LLAWHLRHCGLDPLIHIPDRIFEGYGPNTDAIRALANKGATLLVTVDCGTTSLEPLAEAR
HHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH
RLGMSVVVIDHHQCGEELPEVEALVNPNRPDDLSGLGYLAAVGLTFVTLVAVNRELRSRG
HCCCEEEEEECHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FWSGTRPEPDLLSMLHHVALGTVADVAPLIALNRAFVAKGLIAMRRRDHVGHTALMDVAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNTERRVIE
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHH
QQAEAQAEAEALASLGLEDKGAVIVTASEGWHPGVVGLVASRLKEKFARPAFAIALEPGG
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
IGTGSGRSIPGVDLGKAVRHAVEQGLLMKGGGHAMAAGVTLRKERLAEFRAYLENALAAD
CCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
VAEARHVNEILIDGAISARAATPELVNTLNRAGPFGSGNPEPIVALPSHQLVYADEVGQA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCCCE
HLKLRFKSGDGATVNAIAFRSVGQRLGNALVQHRGQVLHVAGTLTVDRYQGVERVQLRVL
EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHCCHHHEEEEEE
DVAVPDHGPAMIR
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]