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The map label for this gene is yabI [H]

Identifier: 146340514

GI number: 146340514

Start: 3749501

End: 3750031

Strand: Direct

Name: yabI [H]

Synonym: BRADO3556

Alternate gene names: 146340514

Gene position: 3749501-3750031 (Clockwise)

Preceding gene: 146340509

Following gene: 146340515

Centisome position: 50.28

GC content: 68.17

Gene sequence:

>531_bases
ATGGAAGAGTTTGGCCGCGCGGTAGCCGAGTTCGTGCGCGACCATCAGGCCTGGGCTGCCCCGATCGTCCTGCTGCTGGC
CTTCGGCGAGTCGCTGGCCTTCATCTCGCTGCTGATTCCGGCCTGGGGCGCGCTGGTCGCGATCGGCGCCCTGATTGGCG
CCACCGGCATCAGCTTCTGGCCGGTCTGGCTGGCCGGTGGTCTCGGCGCGGCGCTGGGCGATTGGGTCTCCTATTGGTTC
GGCTATCGCTACAAGGACCGCGTCGCCAGGATGTGGCCGCTGTCGCGCTACCCGGAGCTGCTGCCCCGCGGCGAGGCGTT
CGTGCGCGACTGGGGCGTGCCGAGCATTTTCATCGGCCGGTTCTTCGGGCCGCTGCGCGCCTCGGTGCCGCTGGCGGCCG
GCATCTTCGAGATGCCCTATGTGATGTTTCAGGTCGCCAATTTCGTGTCCGCGCTGGTCTGGTCGGCCGCGCTGCTGCTG
TTCGGCGACGTGATCGGCCGCATCATGGAATGGCTGTGGCGCAGCGTGTGA

Upstream 100 bases:

>100_bases
GACTTGAAGTTGCCCGGCTCCGTGGCGTACCAGTCTGCGGTAGGGAACCGCGAAAGGCTTCAAGCACTTACAGCCGGGTC
GCAGGAAAGGCGTCGAGCAG

Downstream 100 bases:

>100_bases
CGTGCGCCAGCCGCCTGCGACCTTGACGCAGGAACCCCACGGCCTTATACGCCTGCGCCCATGATCCACGCAGCGACCAA
TATGATCGCCGGAATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MEEFGRAVAEFVRDHQAWAAPIVLLLAFGESLAFISLLIPAWGALVAIGALIGATGISFWPVWLAGGLGAALGDWVSYWF
GYRYKDRVARMWPLSRYPELLPRGEAFVRDWGVPSIFIGRFFGPLRASVPLAAGIFEMPYVMFQVANFVSALVWSAALLL
FGDVIGRIMEWLWRSV

Sequences:

>Translated_176_residues
MEEFGRAVAEFVRDHQAWAAPIVLLLAFGESLAFISLLIPAWGALVAIGALIGATGISFWPVWLAGGLGAALGDWVSYWF
GYRYKDRVARMWPLSRYPELLPRGEAFVRDWGVPSIFIGRFFGPLRASVPLAAGIFEMPYVMFQVANFVSALVWSAALLL
FGDVIGRIMEWLWRSV
>Mature_176_residues
MEEFGRAVAEFVRDHQAWAAPIVLLLAFGESLAFISLLIPAWGALVAIGALIGATGISFWPVWLAGGLGAALGDWVSYWF
GYRYKDRVARMWPLSRYPELLPRGEAFVRDWGVPSIFIGRFFGPLRASVPLAAGIFEMPYVMFQVANFVSALVWSAALLL
FGDVIGRIMEWLWRSV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=147, Percent_Identity=36.0544217687075, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19600; Mature: 19600

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFGRAVAEFVRDHQAWAAPIVLLLAFGESLAFISLLIPAWGALVAIGALIGATGISFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
PVWLAGGLGAALGDWVSYWFGYRYKDRVARMWPLSRYPELLPRGEAFVRDWGVPSIFIGR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCCHHHHHH
FFGPLRASVPLAAGIFEMPYVMFQVANFVSALVWSAALLLFGDVIGRIMEWLWRSV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEFGRAVAEFVRDHQAWAAPIVLLLAFGESLAFISLLIPAWGALVAIGALIGATGISFW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
PVWLAGGLGAALGDWVSYWFGYRYKDRVARMWPLSRYPELLPRGEAFVRDWGVPSIFIGR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCCHHHHHH
FFGPLRASVPLAAGIFEMPYVMFQVANFVSALVWSAALLLFGDVIGRIMEWLWRSV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]