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The map label for this gene is yfhF [C]

Identifier: 146340504

GI number: 146340504

Start: 3738484

End: 3738873

Strand: Direct

Name: yfhF [C]

Synonym: BRADO3546

Alternate gene names: 146340504

Gene position: 3738484-3738873 (Clockwise)

Preceding gene: 146340503

Following gene: 146340505

Centisome position: 50.14

GC content: 64.1

Gene sequence:

>390_bases
ATGACCAATACGCCAGTCGCCAGCAAGCCGAAGCCGCGGCCCCGTCCGCAGGTGATGCGGCTGACAGACGCCGCGGCCAC
TCGTATCCGCGAGCTGACGCAGCGCGCCGAGTCCGAGATCATCGGACTGCGTGTCGGCGTGAAGAACGGCGGCTGCGCCG
GCCAGTCCTACACGGTGGAATATGCCCATGACATCCGGCCGACCGACGAGGTCGTCGAGGACAAGGGTGTCAAGATCCTG
GTCGACCCCAAGGCCGTGCTGTTCCTGCTCGGCACCGAAATGGACTACCAGACCGACAAGATGCAGGCGCAGTTCGTCTT
CAACAATCCGAACCAGATCAGCGCCTGCGGCTGCGGCGAGTCGGTGCAACTGAAGCCTGCCGAAGTCTGA

Upstream 100 bases:

>100_bases
ATGAGCGACGAGGCCCGCCTCGTGCTCAACATGTGGTGAGGCACGAAGTTTGAATGACGGGCGGGATTGATTGACCGCCG
GGATTGACCAGATGACCGAT

Downstream 100 bases:

>100_bases
GCGTCGCTTTCCAGCCAGGGCGGGTCCGGGACATTGTTGCGTTCCGGACATTGACACGCGCCGTCCTCCCGGCCAACAAA
TCCTGACGAGACCGGAATTT

Product: Iron-sulfur cluster assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTNTPVASKPKPRPRPQVMRLTDAAATRIRELTQRAESEIIGLRVGVKNGGCAGQSYTVEYAHDIRPTDEVVEDKGVKIL
VDPKAVLFLLGTEMDYQTDKMQAQFVFNNPNQISACGCGESVQLKPAEV

Sequences:

>Translated_129_residues
MTNTPVASKPKPRPRPQVMRLTDAAATRIRELTQRAESEIIGLRVGVKNGGCAGQSYTVEYAHDIRPTDEVVEDKGVKIL
VDPKAVLFLLGTEMDYQTDKMQAQFVFNNPNQISACGCGESVQLKPAEV
>Mature_128_residues
TNTPVASKPKPRPRPQVMRLTDAAATRIRELTQRAESEIIGLRVGVKNGGCAGQSYTVEYAHDIRPTDEVVEDKGVKILV
DPKAVLFLLGTEMDYQTDKMQAQFVFNNPNQISACGCGESVQLKPAEV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=117, Percent_Identity=45.2991452991453, Blast_Score=106, Evalue=5e-24,
Organism=Homo sapiens, GI160420328, Length=120, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=42.0560747663551, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=33.0188679245283, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=38.6792452830189, Blast_Score=78, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=46.4912280701754, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=48.1132075471698, Blast_Score=109, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=41.1214953271028, Blast_Score=94, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24642263, Length=111, Percent_Identity=47.7477477477478, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 14146; Mature: 14015

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTPVASKPKPRPRPQVMRLTDAAATRIRELTQRAESEIIGLRVGVKNGGCAGQSYTVE
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEE
YAHDIRPTDEVVEDKGVKILVDPKAVLFLLGTEMDYQTDKMQAQFVFNNPNQISACGCGE
EECCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCC
SVQLKPAEV
CCEEECCCC
>Mature Secondary Structure 
TNTPVASKPKPRPRPQVMRLTDAAATRIRELTQRAESEIIGLRVGVKNGGCAGQSYTVE
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEE
YAHDIRPTDEVVEDKGVKILVDPKAVLFLLGTEMDYQTDKMQAQFVFNNPNQISACGCGE
EECCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCC
SVQLKPAEV
CCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]