| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yitW [H]
Identifier: 146340503
GI number: 146340503
Start: 3738051
End: 3738422
Strand: Direct
Name: yitW [H]
Synonym: BRADO3545
Alternate gene names: 146340503
Gene position: 3738051-3738422 (Clockwise)
Preceding gene: 146340502
Following gene: 146340504
Centisome position: 50.13
GC content: 62.63
Gene sequence:
>372_bases ATGACCGACACGGCCGACGTCAAAACGCAGTCCGTCGAAACCCACTCGGCTTTGCCGCCGGAGGAAACCGAACGGTTGTC CACGGAGATCATCGCCGCGCTCAAGACGGTGTTCGATCCGGAGATTCCGGCTGACATCTACGAGCTCGGCCTGATCTATA AGGTCGACATCAAGGATGACCGCAGCGTCGACGTTGTCATGACCCTGACGACGCCGAACTGCCCGGCGGCCGGCGAACTG CCGACGATGGTGGAGAACGCCATTGCCAGCGTCCCTGGTGTGGGCGTGGTGAGCGTCAACATCGTCTGGGAGCCGCAATG GACGCCGGACCGGATGAGCGACGAGGCCCGCCTCGTGCTCAACATGTGGTGA
Upstream 100 bases:
>100_bases ACGTCACGGCGACCTGCCGCGCCTCGTTTGGCATGTACAATACGAGGGAAGAGGTCGATCAACTGGCACAGGCATTGATC AAGGCGCGGGATTTGTTTGC
Downstream 100 bases:
>100_bases GGCACGAAGTTTGAATGACGGGCGGGATTGATTGACCGCCGGGATTGACCAGATGACCGATATGACCAATACGCCAGTCG CCAGCAAGCCGAAGCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDDRSVDVVMTLTTPNCPAAGEL PTMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVLNMW
Sequences:
>Translated_123_residues MTDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDDRSVDVVMTLTTPNCPAAGEL PTMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVLNMW >Mature_122_residues TDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDDRSVDVVMTLTTPNCPAAGELP TMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVLNMW
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 13511; Mature: 13380
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDD CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCC RSVDVVMTLTTPNCPAAGELPTMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVL CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE NMW EEC >Mature Secondary Structure TDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDD CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCC RSVDVVMTLTTPNCPAAGELPTMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVL CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE NMW EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]