Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340444
Identifier: 146340444
GI number: 146340444
Start: 3666265
End: 3667824
Strand: Direct
Name: 146340444
Synonym: BRADO3484
Alternate gene names: NA
Gene position: 3666265-3667824 (Clockwise)
Preceding gene: 146340443
Following gene: 146340445
Centisome position: 49.17
GC content: 67.18
Gene sequence:
>1560_bases ATGACAAATCCTGCGATGACCGGTCCTGCTCCGCCACCGCCTGTTGTCGTCAGCGCCGCCGACCGGGCGCGGTTCGCGGA GCTGCAGGCGGAGTTCGCAACCGCTTATACGAAGCTGTTCGATGACCCGAGCCTGCCGCGCACGGTCGTGATCGTGCCGA GCCTCAGCCTCGATCGCGAAGTTCTTGCCAAGGTCTCGGGCGTGCATCACTACGAGGAGCGCATGCTGTGCATGCTGCTG CTGCTCCGCATGCCGCGGACCCGCGTGGTCTATGTGACGAGCTCGCCGATCTCGGACACCATCATCGACTACTATCTGCA TCTGCTGCCGGGTGTGCCCGGTGGCCATGCCCGCGCCCGGCTGACATTGTTATCCTGCGACGATGCCTCGGCAGCGCCGC TGACGCAGAAGATCCTGGCGCGCCCGCGCGTGCTCGATCGGCTCCGCGCGGCATTCCAGGGCGCGGGGCCCGCGCATCTG AGCTGCTATACGGTGACCGAGCTGGAGCGCAGGCTCGCGCTCGTGCTGGGCATCCCGATCTACGGCTGCGATCCGTCGCT CGCCTCGTGGGGCTCGAAAAGCGGATCGCGGAGGATTTTCAAGGAGGTCGGGATCGATCTGCCGGACGGTTTCGAGGATC TGTCCGACGCGTATGCGCTGACGGAGGCGCTGACGGAGCTGGCGCGGCGCAGACCCGGGCTGCGCAAGGCCGTGGTCAAG CTGAACGAGGGCTTCTCCGGCGAGGGCAACGCGGTCGTCGACCTCACCGGCGCACCGATGGATCATGGCCTGCGACCGTG GCTGCACGAGCGCTTGCCGCACATGGCATTCGAGGCGCGCGGCATGAGCTGGGAGGTGTTCGAGGCCAAGCTCGGCGCGA TGGGCGGGATCGTCGAGGAGTTCATTCCCGGGGCGGCGAAGCAGTCGCCATCGTCGCAATTGCGCATCGATCCGCTCGGC CGGGTGGAGGCCATATCGACGCATGATCAGGTGCTGGGCGGGCCGAGCGGGCAGATCTTCCTCGGCTGCCGGTTTCCGGC CGACGACGCCTACCGGCGCGATATCCAGGCCCGCGGCGTCGCGGTGGCGGAGGCGCTCGCGGCCAAGGGCGTGATCGGTC GGCTCGGGGTCGACTTCATCTCGGTGCGCGACGGACCGGACTGGCGGCACGTCGCCATCGAGATCAATCTGCGCAAGGGC GGCACGACACATCCGTTCCTGATGCTGCAGTTCCTCACCGACGGCCGTTATGACCCGGGCAGCGGTGAATTCGTCACGCC GGCGGGCCAGCCGCGCTGTTACTACGCCTCCGACAATCTGGAAGGCGACGCCTATCGCGGCTTGCGGCCGGACGATCTCG TCGACATCGCCGTCGTCAACGGCCTGCATTTTCACGCTGCGACCGGCGAGGGCGTCGCATTCCATCTCATCGGCGCATTG TCGGAGTTCGGCAAGCTCGGGGTGGTCTGCATCGGCCGGACGCATGAGCGCGCAGCCGAGCTCTATCGCCGCACCGTGGA GATTCTCGATCGGCAACGGATCGAGGCGAGCGGGTCTTAG
Upstream 100 bases:
>100_bases GCGCGATCCCCAGGCGGTCAGGCTCGATTGTCTCGGCTATCTCATGCATCGCATCGGCCGCGACGGACGGCGGCTCGCCG ATGACCGCGGGTAACGCGCG
Downstream 100 bases:
>100_bases CCGGCTTGCCATCGGTCGAGCAGGGCGCGGTTGCGCGCCATGGTCTTGCAGGCATGCCGGGGCGACGGTTTGCTTTGCCG CATGCGAGACCTATAGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTNPAMTGPAPPPPVVVSAADRARFAELQAEFATAYTKLFDDPSLPRTVVIVPSLSLDREVLAKVSGVHHYEERMLCMLL LLRMPRTRVVYVTSSPISDTIIDYYLHLLPGVPGGHARARLTLLSCDDASAAPLTQKILARPRVLDRLRAAFQGAGPAHL SCYTVTELERRLALVLGIPIYGCDPSLASWGSKSGSRRIFKEVGIDLPDGFEDLSDAYALTEALTELARRRPGLRKAVVK LNEGFSGEGNAVVDLTGAPMDHGLRPWLHERLPHMAFEARGMSWEVFEAKLGAMGGIVEEFIPGAAKQSPSSQLRIDPLG RVEAISTHDQVLGGPSGQIFLGCRFPADDAYRRDIQARGVAVAEALAAKGVIGRLGVDFISVRDGPDWRHVAIEINLRKG GTTHPFLMLQFLTDGRYDPGSGEFVTPAGQPRCYYASDNLEGDAYRGLRPDDLVDIAVVNGLHFHAATGEGVAFHLIGAL SEFGKLGVVCIGRTHERAAELYRRTVEILDRQRIEASGS
Sequences:
>Translated_519_residues MTNPAMTGPAPPPPVVVSAADRARFAELQAEFATAYTKLFDDPSLPRTVVIVPSLSLDREVLAKVSGVHHYEERMLCMLL LLRMPRTRVVYVTSSPISDTIIDYYLHLLPGVPGGHARARLTLLSCDDASAAPLTQKILARPRVLDRLRAAFQGAGPAHL SCYTVTELERRLALVLGIPIYGCDPSLASWGSKSGSRRIFKEVGIDLPDGFEDLSDAYALTEALTELARRRPGLRKAVVK LNEGFSGEGNAVVDLTGAPMDHGLRPWLHERLPHMAFEARGMSWEVFEAKLGAMGGIVEEFIPGAAKQSPSSQLRIDPLG RVEAISTHDQVLGGPSGQIFLGCRFPADDAYRRDIQARGVAVAEALAAKGVIGRLGVDFISVRDGPDWRHVAIEINLRKG GTTHPFLMLQFLTDGRYDPGSGEFVTPAGQPRCYYASDNLEGDAYRGLRPDDLVDIAVVNGLHFHAATGEGVAFHLIGAL SEFGKLGVVCIGRTHERAAELYRRTVEILDRQRIEASGS >Mature_518_residues TNPAMTGPAPPPPVVVSAADRARFAELQAEFATAYTKLFDDPSLPRTVVIVPSLSLDREVLAKVSGVHHYEERMLCMLLL LRMPRTRVVYVTSSPISDTIIDYYLHLLPGVPGGHARARLTLLSCDDASAAPLTQKILARPRVLDRLRAAFQGAGPAHLS CYTVTELERRLALVLGIPIYGCDPSLASWGSKSGSRRIFKEVGIDLPDGFEDLSDAYALTEALTELARRRPGLRKAVVKL NEGFSGEGNAVVDLTGAPMDHGLRPWLHERLPHMAFEARGMSWEVFEAKLGAMGGIVEEFIPGAAKQSPSSQLRIDPLGR VEAISTHDQVLGGPSGQIFLGCRFPADDAYRRDIQARGVAVAEALAAKGVIGRLGVDFISVRDGPDWRHVAIEINLRKGG TTHPFLMLQFLTDGRYDPGSGEFVTPAGQPRCYYASDNLEGDAYRGLRPDDLVDIAVVNGLHFHAATGEGVAFHLIGALS EFGKLGVVCIGRTHERAAELYRRTVEILDRQRIEASGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI72534720, Length=436, Percent_Identity=21.3302752293578, Blast_Score=94, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56370; Mature: 56239
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPAMTGPAPPPPVVVSAADRARFAELQAEFATAYTKLFDDPSLPRTVVIVPSLSLDRE CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHH VLAKVSGVHHYEERMLCMLLLLRMPRTRVVYVTSSPISDTIIDYYLHLLPGVPGGHARAR HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE LTLLSCDDASAAPLTQKILARPRVLDRLRAAFQGAGPAHLSCYTVTELERRLALVLGIPI EEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHEECCE YGCDPSLASWGSKSGSRRIFKEVGIDLPDGFEDLSDAYALTEALTELARRRPGLRKAVVK ECCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNEGFSGEGNAVVDLTGAPMDHGLRPWLHERLPHMAFEARGMSWEVFEAKLGAMGGIVEE HCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH FIPGAAKQSPSSQLRIDPLGRVEAISTHDQVLGGPSGQIFLGCRFPADDAYRRDIQARGV HCCCCCCCCCCCCEEECCCCCEEEECCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCH AVAEALAAKGVIGRLGVDFISVRDGPDWRHVAIEINLRKGGTTHPFLMLQFLTDGRYDPG HHHHHHHHCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHEEHHCCCCCCC SGEFVTPAGQPRCYYASDNLEGDAYRGLRPDDLVDIAVVNGLHFHAATGEGVAFHLIGAL CCCEECCCCCCEEEEECCCCCCCCCCCCCCCHHEEEEEECCEEEEECCCCCHHHHHHHHH SEFGKLGVVCIGRTHERAAELYRRTVEILDRQRIEASGS HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNPAMTGPAPPPPVVVSAADRARFAELQAEFATAYTKLFDDPSLPRTVVIVPSLSLDRE CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHH VLAKVSGVHHYEERMLCMLLLLRMPRTRVVYVTSSPISDTIIDYYLHLLPGVPGGHARAR HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE LTLLSCDDASAAPLTQKILARPRVLDRLRAAFQGAGPAHLSCYTVTELERRLALVLGIPI EEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHEECCE YGCDPSLASWGSKSGSRRIFKEVGIDLPDGFEDLSDAYALTEALTELARRRPGLRKAVVK ECCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNEGFSGEGNAVVDLTGAPMDHGLRPWLHERLPHMAFEARGMSWEVFEAKLGAMGGIVEE HCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH FIPGAAKQSPSSQLRIDPLGRVEAISTHDQVLGGPSGQIFLGCRFPADDAYRRDIQARGV HCCCCCCCCCCCCEEECCCCCEEEECCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCH AVAEALAAKGVIGRLGVDFISVRDGPDWRHVAIEINLRKGGTTHPFLMLQFLTDGRYDPG HHHHHHHHCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHEEHHCCCCCCC SGEFVTPAGQPRCYYASDNLEGDAYRGLRPDDLVDIAVVNGLHFHAATGEGVAFHLIGAL CCCEECCCCCCEEEEECCCCCCCCCCCCCCCHHEEEEEECCEEEEECCCCCHHHHHHHHH SEFGKLGVVCIGRTHERAAELYRRTVEILDRQRIEASGS HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA