| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ppk [H]
Identifier: 146340318
GI number: 146340318
Start: 3537272
End: 3539467
Strand: Reverse
Name: ppk [H]
Synonym: BRADO3341
Alternate gene names: 146340318
Gene position: 3539467-3537272 (Counterclockwise)
Preceding gene: 146340319
Following gene: 146340317
Centisome position: 47.47
GC content: 64.71
Gene sequence:
>2196_bases ATGGATACCGAGCAAGTTACTGAACTCGCAGCGAAAGAGCCGGTTGCGGCGCCCACGAACGAGATCGCCTCGAGCCCCGA GCGCTTCATCAATCGGGAGCTGTCCTGGCTGCACTTCAACCGCCGCGTGCTCGAGGAATCAGTCAATCCACGCCATCCGG CGCTGGAGCGTGTGCGGTTCCTATCGATTTCCGCCAACAACCTTGATGAATTCTTCATGGTCCGCGTCGCCGGCATCCGC GCCCAGGTGCGCGAAGGCATCGCGGAGCGCAGCCCGGACGGGCTGACACCAACCGAGCAGCTCAAGCTGATCAACGAAAC CGTGTCGCAGCTCGCGATCGACCAGCAGGCGATCTGGCGCGACCTGCGCAAGTTCCTCGCCGAGCTCGGCATCGTGCTGG TCGACGGCCAGGACGTCACCAAGGCCGAGCGCGCCTGGATCGAGGATCATTTCCTCGCCAACATCTTCCCGCTGCTGACG CCGCTGGCGATCGATCCAGCGCATCCGTTCCCGTTCATCCCGAGCCTCGGCTTCACGGTGGCGCTGCAGCTGACCCGCAC CTCCGACGGCCGGCCGATGAACGCGCTGATCCGCATGCCGGGCAAGATCGACCGCTTCATCCGCTTCCCCGGCGCCAAGG ACGGCGTCATCCGCCTGATCACGCTCGAACAGGCCACCAGCCTGTTCATCGGCCGGCTGTTTCCCGGCTACACGGTGAAG GGCCAGGGCGCCTTCCGCATCATCCGCGACAGCGAGATCGAGATCGAGGAAGAAGCCGAGGACCTCGTCCGGCTGTTCGA GACCGCGCTGAAGCGGCGCCGCCGCGGCTCGGTCATCCGGCTCGAGATCGAGGCCGCCATGCCGGAGGAGCTGCGCCAAT TCGTGCAGGACGCGCTGGCGACAACTGACGACGAGGTGTTCGTGGTCGACGGCGTGCTGGCGATGAACGAGCTGTCACAG CTCACGCGCGTCGATCGCCCCGACCTCGAATTCGCGCCCTACGTGCCGCGCCATCCCGAGCGCGTGCGCGACCATGGCGG CGACATCTTCGCGGCGATCCGGCAGAAGGACCTGATCGTCCATCACCCCTACGAGTCGTTCGACGTCGTCGTGCAGTTCC TGCAGCAGGCGGCGCGCGATCCCGACGTCGTCGCGATCAAGCAGACGCTGTATCGCACCTCGAACAACTCGCCGATCGTG CGCACCCTGGTGGAAGCGGCCGAGGCCGGCAAGTCGGTCACGGCGCTGGTCGAGCTCAAGGCGCGATTCGACGAGGAGGC CAATATCCGCTGGGCGCGCGACCTCGAGCGCGCCGGCGTGCAGGTCGTCTACGGCTTCCTGCAGCTCAAGACGCATGCGA AATTGTCGATGGTCGTGCGCCGCGAGGGCGGCAGCCTCACGACCTACGTGCACACCGGCACTGGCAACTATCATCCGGTG ACGGCGCGCATCTACACCGACCTGTCCTACTTCACGTCGGACCCAGTGATCGGCCGCGACGTCACGCGGGTGTTCAACTA CATCACCGGCTATGCCGAGCCCATCGACATCGAGAAGATGGCAGTGTCGCCGCTCACGCTTCGCAAGCGCATGATCGAGC ACATCCATGGCGAGACCAGCTTTGCCCGCCAGGGCAAGCCGGCCGTGATCTGGATGAAGATGAACTCGCTGGTCGATCCC GATATCATCGACGCGCTCTATGAGGCGTCTCAGGCCGGCGTCTCGATCGAGCTGATCGTGCGCGGCATCTGCTGCCTGCG TCCCGGCATTCCCGGCTTGTCCGACAACATCCGCGTCAAGTCGGTGATCGGCCGCTTCCTGGAGCATGGCCGCATCTACT GCTTTGGTATGGGTCAGGGCCTGCCGAGTGCCAAGGCGGCGGTCTACATCTCCTCGGCCGACATGATGCCGCGCAATCTC GACCGTCGCGTCGAGGTGCTCTGCCCGTTGCAGAACCCGACCGTGCACCAGCAGGTGCTGGAGCAGATCATGGTCGCGAA TCTCAAGGATACCGAACAGAGCTGGCAATTGTTGCCGGACGGGTCGTCAACGCGTATGAAGGCCGCGAAGGGCGAGGAGC CCTTCAACCTGCACAATTACTTCATGACGAATCCGAGTCTCTCCGGCCGTGGCAAGTCGCTCAAGGAATCATCACCGCGC CGGCTCACCCGCCGGAACGAGCGCCCCCCTTCCTAG
Upstream 100 bases:
>100_bases ACCTCAATGGTGCCGGGAACGTCATCCCTTCGTCATACGCGTTGAGCTACGGTCCGCCCTCGCGCCCATTGCGCCGTGAT CGAATATGGATTGATCTCTG
Downstream 100 bases:
>100_bases CGCCCGCCTCAAGAAGGGAATGCCCTGGTGAAGCGGCCTTCTCCCACGGCCGCGAGCGTTGGCGTCATCGATATCGGCTC GAACTCCGTCCGCCTCGTCG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MDTEQVTELAAKEPVAAPTNEIASSPERFINRELSWLHFNRRVLEESVNPRHPALERVRFLSISANNLDEFFMVRVAGIR AQVREGIAERSPDGLTPTEQLKLINETVSQLAIDQQAIWRDLRKFLAELGIVLVDGQDVTKAERAWIEDHFLANIFPLLT PLAIDPAHPFPFIPSLGFTVALQLTRTSDGRPMNALIRMPGKIDRFIRFPGAKDGVIRLITLEQATSLFIGRLFPGYTVK GQGAFRIIRDSEIEIEEEAEDLVRLFETALKRRRRGSVIRLEIEAAMPEELRQFVQDALATTDDEVFVVDGVLAMNELSQ LTRVDRPDLEFAPYVPRHPERVRDHGGDIFAAIRQKDLIVHHPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIV RTLVEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLQLKTHAKLSMVVRREGGSLTTYVHTGTGNYHPV TARIYTDLSYFTSDPVIGRDVTRVFNYITGYAEPIDIEKMAVSPLTLRKRMIEHIHGETSFARQGKPAVIWMKMNSLVDP DIIDALYEASQAGVSIELIVRGICCLRPGIPGLSDNIRVKSVIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNL DRRVEVLCPLQNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNLHNYFMTNPSLSGRGKSLKESSPR RLTRRNERPPS
Sequences:
>Translated_731_residues MDTEQVTELAAKEPVAAPTNEIASSPERFINRELSWLHFNRRVLEESVNPRHPALERVRFLSISANNLDEFFMVRVAGIR AQVREGIAERSPDGLTPTEQLKLINETVSQLAIDQQAIWRDLRKFLAELGIVLVDGQDVTKAERAWIEDHFLANIFPLLT PLAIDPAHPFPFIPSLGFTVALQLTRTSDGRPMNALIRMPGKIDRFIRFPGAKDGVIRLITLEQATSLFIGRLFPGYTVK GQGAFRIIRDSEIEIEEEAEDLVRLFETALKRRRRGSVIRLEIEAAMPEELRQFVQDALATTDDEVFVVDGVLAMNELSQ LTRVDRPDLEFAPYVPRHPERVRDHGGDIFAAIRQKDLIVHHPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIV RTLVEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLQLKTHAKLSMVVRREGGSLTTYVHTGTGNYHPV TARIYTDLSYFTSDPVIGRDVTRVFNYITGYAEPIDIEKMAVSPLTLRKRMIEHIHGETSFARQGKPAVIWMKMNSLVDP DIIDALYEASQAGVSIELIVRGICCLRPGIPGLSDNIRVKSVIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNL DRRVEVLCPLQNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNLHNYFMTNPSLSGRGKSLKESSPR RLTRRNERPPS >Mature_731_residues MDTEQVTELAAKEPVAAPTNEIASSPERFINRELSWLHFNRRVLEESVNPRHPALERVRFLSISANNLDEFFMVRVAGIR AQVREGIAERSPDGLTPTEQLKLINETVSQLAIDQQAIWRDLRKFLAELGIVLVDGQDVTKAERAWIEDHFLANIFPLLT PLAIDPAHPFPFIPSLGFTVALQLTRTSDGRPMNALIRMPGKIDRFIRFPGAKDGVIRLITLEQATSLFIGRLFPGYTVK GQGAFRIIRDSEIEIEEEAEDLVRLFETALKRRRRGSVIRLEIEAAMPEELRQFVQDALATTDDEVFVVDGVLAMNELSQ LTRVDRPDLEFAPYVPRHPERVRDHGGDIFAAIRQKDLIVHHPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIV RTLVEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVYGFLQLKTHAKLSMVVRREGGSLTTYVHTGTGNYHPV TARIYTDLSYFTSDPVIGRDVTRVFNYITGYAEPIDIEKMAVSPLTLRKRMIEHIHGETSFARQGKPAVIWMKMNSLVDP DIIDALYEASQAGVSIELIVRGICCLRPGIPGLSDNIRVKSVIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNL DRRVEVLCPLQNPTVHQQVLEQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNLHNYFMTNPSLSGRGKSLKESSPR RLTRRNERPPS
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=677, Percent_Identity=34.5642540620384, Blast_Score=383, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82369; Mature: 82369
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTEQVTELAAKEPVAAPTNEIASSPERFINRELSWLHFNRRVLEESVNPRHPALERVRF CCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE LSISANNLDEFFMVRVAGIRAQVREGIAERSPDGLTPTEQLKLINETVSQLAIDQQAIWR EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DLRKFLAELGIVLVDGQDVTKAERAWIEDHFLANIFPLLTPLAIDPAHPFPFIPSLGFTV HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE ALQLTRTSDGRPMNALIRMPGKIDRFIRFPGAKDGVIRLITLEQATSLFIGRLFPGYTVK EEEEEECCCCCCHHHHHCCCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEE GQGAFRIIRDSEIEIEEEAEDLVRLFETALKRRRRGSVIRLEIEAAMPEELRQFVQDALA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH TTDDEVFVVDGVLAMNELSQLTRVDRPDLEFAPYVPRHPERVRDHGGDIFAAIRQKDLIV CCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHCCEEE HHPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIVRTLVEAAEAGKSVTALVELK ECCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH ARFDEEANIRWARDLERAGVQVVYGFLQLKTHAKLSMVVRREGGSLTTYVHTGTGNYHPV HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCEE TARIYTDLSYFTSDPVIGRDVTRVFNYITGYAEPIDIEKMAVSPLTLRKRMIEHIHGETS EEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCH FARQGKPAVIWMKMNSLVDPDIIDALYEASQAGVSIELIVRGICCLRPGIPGLSDNIRVK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHH SVIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVL HHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH EQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNLHNYFMTNPSLSGRGKSLKESSPR HHHHHCCCCCCCHHCEECCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCH RLTRRNERPPS HHHHCCCCCCC >Mature Secondary Structure MDTEQVTELAAKEPVAAPTNEIASSPERFINRELSWLHFNRRVLEESVNPRHPALERVRF CCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE LSISANNLDEFFMVRVAGIRAQVREGIAERSPDGLTPTEQLKLINETVSQLAIDQQAIWR EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DLRKFLAELGIVLVDGQDVTKAERAWIEDHFLANIFPLLTPLAIDPAHPFPFIPSLGFTV HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE ALQLTRTSDGRPMNALIRMPGKIDRFIRFPGAKDGVIRLITLEQATSLFIGRLFPGYTVK EEEEEECCCCCCHHHHHCCCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCEEEE GQGAFRIIRDSEIEIEEEAEDLVRLFETALKRRRRGSVIRLEIEAAMPEELRQFVQDALA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH TTDDEVFVVDGVLAMNELSQLTRVDRPDLEFAPYVPRHPERVRDHGGDIFAAIRQKDLIV CCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHCCEEE HHPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIVRTLVEAAEAGKSVTALVELK ECCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH ARFDEEANIRWARDLERAGVQVVYGFLQLKTHAKLSMVVRREGGSLTTYVHTGTGNYHPV HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCEE TARIYTDLSYFTSDPVIGRDVTRVFNYITGYAEPIDIEKMAVSPLTLRKRMIEHIHGETS EEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCH FARQGKPAVIWMKMNSLVDPDIIDALYEASQAGVSIELIVRGICCLRPGIPGLSDNIRVK HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHH SVIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVL HHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH EQIMVANLKDTEQSWQLLPDGSSTRMKAAKGEEPFNLHNYFMTNPSLSGRGKSLKESSPR HHHHHCCCCCCCHHCEECCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCH RLTRRNERPPS HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA