| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340295
Identifier: 146340295
GI number: 146340295
Start: 3511933
End: 3514311
Strand: Reverse
Name: 146340295
Synonym: BRADO3318
Alternate gene names: NA
Gene position: 3514311-3511933 (Counterclockwise)
Preceding gene: 146340297
Following gene: 146340286
Centisome position: 47.13
GC content: 70.79
Gene sequence:
>2379_bases ATGGCAAGCCGAACGGCAGGAGTTGCATTTGCCATTGCCGCCGCTACCGTAGCGAGCGTTCTGGCCTCGCTGCCGCGCGC CGCCATGACGGCTGAGGAGTGCCTCACCGAGCCGACGGGCGACAAATCCGACGCTCAGCATTGGTATTATCGCTTCGATC GCGGCACCAATCGACGCTGCTGGTATCTCAAGGATGCGAATGGGCGGGACGTCCCGACGTCCTCCGTCCGCGCCACGCAA CAGCCGGCGGCCTGGGACTTTGCCCAACCGGCGCCGCCCAAGCTGTCGCCGCGGCGGACGGATGGTCCAGCGCAGCGTTC CGGCTCGGACGCCATGGCGGAGTTTCCGCAATCCCGCCTGCGGACCAGCGTCGACCCGAGAGGGACGCCGAAGCCGCAGA ATCTGGCGATCACACCGACCACGCTGACGGCGTCCGATGCCAGCCTGTCGCGCGGGCTCGATGCGGCGCCCTGGGCGTCG GCGCCGCCGCAGCAGGTCGACGCGACGATGGGCAACGCAGCGCCGGCTGCGACCGCTGATGACGGCAACGCCGATGCGGA TGCCATGACGGCGGGCACGAACGACAATCCGGCCACCGCAGCCTCGAAGGCGGCGAAGCCCGAAGCGCCGATTCCCATGC TGATGCTGGTTGTGATCGGTGCGTTGGCGATCTCGGGCCTGCTCGCCAGCGCCCTCTACCGGCTCAGCCGCATGGGACGG CAACGCAAGCGCAATGGCGGCTGGCAAGAGGATGCGCGATCGCGCCGCGGACGCACGAAGCCCCGCGGCAAGGCGCCGCA ATCGGGCATGCGAACTGGCCGCGGCGGCATGCCGGGTGCGTCCTATGCCGATGGCGGCCGGGGAGCCCAGCCGGTGTCGG CGCTGGACCTCGCCAGTGCCCGGTTGCCAACGGCACAGCCGGAATCGCCCGACGCGCGCGGTTACCGCCAGTCACCGGCG CACTATCACGAGGAGCATCAGTCGGTCTCGGCGCGCCGACGCGAGCTTGACGCCGCCTCCGACATGCAGCGTCCGCAAAA CACCGACGCCGTATGGCAGGCAGCCGATGAGCTCGACCGCATCTCTGCCCAACGGGCGAGCGTAGCGCAGGCGCAAGCGG CGGCGCCGCCGGCAGCGCCTAAGGCCGCCATGGTGCCGCCGGCACCGCCTCCGCCGCAACAGCCGCAGCCAGCCGCCGCG CAGATGGCCGCCGCTCAGATTGTTGCGGCCCAGGCCACCGCCGCGGATGTCGCAGCAGCCAAAGCCAGCGCCGCGGCAGC CGCTCTGGCCTCCCAGGCTCCGGCCTACGGCGCAGGATCAGAAGCGCCGCCGCTGTCCCGATCGAGCACCAGGGACGCCG CACCGGCGGATGCCTCTACGCCGGCGCCTCCTGCCGCCCAGCCGTCCCCGAACGCTGCGGCAGCAACGCCGCCGGCCCCC GTCGACGTCGGCGAAATCGTCTCCGCTTTGCGCAAGGCTCGCGCCAGCGAAGCGGCATCCGGCTCGCCTGCCGGCGCAGC GCCGGTCGACGCCGCGAAGGTGATTGCGGCGCTCCTGGTGTCGCGCGCGGCGAAGCGTCGGGTACCCCAGGCCGGGGTGA ACGAAACCGGCCAAGCGTCGCAGGTGGCCGGCCCTGCCGAGCCGGCGCCGCCCGAGGACGTCGTGTCGCAGCCCACGCAA GCCGCGCAGCAGCTGATCAATCGTCTACGGAATGGCCAGCCAGCTGCAGCGCCCGGCGTCGTTGGGTCTGATCAAAATGG CCAGGCCCCATCGGTCGATCCGGCGGCCGCGCTGATCGAGACGCTTCGCGCACATGCGGCGCGGCAGCCGGCCTATCAGG CCGCGCAAGCGCAAGTCGCAGCGGCGCAGCCCGCGGTCGCCAATGCCGCTCCCGAGGATGAGCTCGATGATCCCGCGGCG GCGCTGATCAATCTCCTGCAGTCTCGCTTCTCGCTGCCCGAAGATGAACTCGAGCCGCAACCGCCTGAGGCAGAAGAAGA GCAGTTCGCCTACGCGGAGGCGCCAGCGAACGTCGCCCGCTTGCAGGATGATCCCGCGGCTCAGCTCATGAGTCTGCTGG AATCACGGTCGACGATTCCGGCGGCCGCGCCTGTCATCGACAGGCCTCAACTGGAGCCGCGGCCGCAGCCTCAAGCGAGG CCTTATCCGCAGCCGCAACCCGAGCGGTCCCGACAGCAGCAACGAGCACCCCAGCCGCAGCCTGCGTTCGTCCCGACGCC GTACGAGGATCCGGCGACGCCGCCGCTCGACTTCATTCCGCGGCCTCAGGCCCTACGGCCCCGGCCCCGCAGCATTCAGC AGGATGACGAGCTCGACGGCATCCAGGACATCCTGGCAAGGCTTGGCCGCCGGGCGTGA
Upstream 100 bases:
>100_bases GACGAAAAGGCTGGGTCAGAATTAATCCGGAATTGCGGCTCATTGCCACCTAACTTGTCTCCGAGAACGCGCCGTTGCGT AAGCGTATCCGGAGTCGTCA
Downstream 100 bases:
>100_bases ACGGTTGAACGGACGGCGCGTCAGCCCTCGAGCTGGCGCTGCAGCTCGCGCACGAAGGTCGTCAGCCCGGTCCGGCGCTC GCGCTTCAGCCGCTCAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 792; Mature: 791
Protein sequence:
>792_residues MASRTAGVAFAIAAATVASVLASLPRAAMTAEECLTEPTGDKSDAQHWYYRFDRGTNRRCWYLKDANGRDVPTSSVRATQ QPAAWDFAQPAPPKLSPRRTDGPAQRSGSDAMAEFPQSRLRTSVDPRGTPKPQNLAITPTTLTASDASLSRGLDAAPWAS APPQQVDATMGNAAPAATADDGNADADAMTAGTNDNPATAASKAAKPEAPIPMLMLVVIGALAISGLLASALYRLSRMGR QRKRNGGWQEDARSRRGRTKPRGKAPQSGMRTGRGGMPGASYADGGRGAQPVSALDLASARLPTAQPESPDARGYRQSPA HYHEEHQSVSARRRELDAASDMQRPQNTDAVWQAADELDRISAQRASVAQAQAAAPPAAPKAAMVPPAPPPPQQPQPAAA QMAAAQIVAAQATAADVAAAKASAAAAALASQAPAYGAGSEAPPLSRSSTRDAAPADASTPAPPAAQPSPNAAAATPPAP VDVGEIVSALRKARASEAASGSPAGAAPVDAAKVIAALLVSRAAKRRVPQAGVNETGQASQVAGPAEPAPPEDVVSQPTQ AAQQLINRLRNGQPAAAPGVVGSDQNGQAPSVDPAAALIETLRAHAARQPAYQAAQAQVAAAQPAVANAAPEDELDDPAA ALINLLQSRFSLPEDELEPQPPEAEEEQFAYAEAPANVARLQDDPAAQLMSLLESRSTIPAAAPVIDRPQLEPRPQPQAR PYPQPQPERSRQQQRAPQPQPAFVPTPYEDPATPPLDFIPRPQALRPRPRSIQQDDELDGIQDILARLGRRA
Sequences:
>Translated_792_residues MASRTAGVAFAIAAATVASVLASLPRAAMTAEECLTEPTGDKSDAQHWYYRFDRGTNRRCWYLKDANGRDVPTSSVRATQ QPAAWDFAQPAPPKLSPRRTDGPAQRSGSDAMAEFPQSRLRTSVDPRGTPKPQNLAITPTTLTASDASLSRGLDAAPWAS APPQQVDATMGNAAPAATADDGNADADAMTAGTNDNPATAASKAAKPEAPIPMLMLVVIGALAISGLLASALYRLSRMGR QRKRNGGWQEDARSRRGRTKPRGKAPQSGMRTGRGGMPGASYADGGRGAQPVSALDLASARLPTAQPESPDARGYRQSPA HYHEEHQSVSARRRELDAASDMQRPQNTDAVWQAADELDRISAQRASVAQAQAAAPPAAPKAAMVPPAPPPPQQPQPAAA QMAAAQIVAAQATAADVAAAKASAAAAALASQAPAYGAGSEAPPLSRSSTRDAAPADASTPAPPAAQPSPNAAAATPPAP VDVGEIVSALRKARASEAASGSPAGAAPVDAAKVIAALLVSRAAKRRVPQAGVNETGQASQVAGPAEPAPPEDVVSQPTQ AAQQLINRLRNGQPAAAPGVVGSDQNGQAPSVDPAAALIETLRAHAARQPAYQAAQAQVAAAQPAVANAAPEDELDDPAA ALINLLQSRFSLPEDELEPQPPEAEEEQFAYAEAPANVARLQDDPAAQLMSLLESRSTIPAAAPVIDRPQLEPRPQPQAR PYPQPQPERSRQQQRAPQPQPAFVPTPYEDPATPPLDFIPRPQALRPRPRSIQQDDELDGIQDILARLGRRA >Mature_791_residues ASRTAGVAFAIAAATVASVLASLPRAAMTAEECLTEPTGDKSDAQHWYYRFDRGTNRRCWYLKDANGRDVPTSSVRATQQ PAAWDFAQPAPPKLSPRRTDGPAQRSGSDAMAEFPQSRLRTSVDPRGTPKPQNLAITPTTLTASDASLSRGLDAAPWASA PPQQVDATMGNAAPAATADDGNADADAMTAGTNDNPATAASKAAKPEAPIPMLMLVVIGALAISGLLASALYRLSRMGRQ RKRNGGWQEDARSRRGRTKPRGKAPQSGMRTGRGGMPGASYADGGRGAQPVSALDLASARLPTAQPESPDARGYRQSPAH YHEEHQSVSARRRELDAASDMQRPQNTDAVWQAADELDRISAQRASVAQAQAAAPPAAPKAAMVPPAPPPPQQPQPAAAQ MAAAQIVAAQATAADVAAAKASAAAAALASQAPAYGAGSEAPPLSRSSTRDAAPADASTPAPPAAQPSPNAAAATPPAPV DVGEIVSALRKARASEAASGSPAGAAPVDAAKVIAALLVSRAAKRRVPQAGVNETGQASQVAGPAEPAPPEDVVSQPTQA AQQLINRLRNGQPAAAPGVVGSDQNGQAPSVDPAAALIETLRAHAARQPAYQAAQAQVAAAQPAVANAAPEDELDDPAAA LINLLQSRFSLPEDELEPQPPEAEEEQFAYAEAPANVARLQDDPAAQLMSLLESRSTIPAAAPVIDRPQLEPRPQPQARP YPQPQPERSRQQQRAPQPQPAFVPTPYEDPATPPLDFIPRPQALRPRPRSIQQDDELDGIQDILARLGRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82161; Mature: 82030
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTAGVAFAIAAATVASVLASLPRAAMTAEECLTEPTGDKSDAQHWYYRFDRGTNRRC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCEE WYLKDANGRDVPTSSVRATQQPAAWDFAQPAPPKLSPRRTDGPAQRSGSDAMAEFPQSRL EEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCHHHH RTSVDPRGTPKPQNLAITPTTLTASDASLSRGLDAAPWASAPPQQVDATMGNAAPAATAD HCCCCCCCCCCCCCEEECCCEECCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC DGNADADAMTAGTNDNPATAASKAAKPEAPIPMLMLVVIGALAISGLLASALYRLSRMGR CCCCCCCCEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRKRNGGWQEDARSRRGRTKPRGKAPQSGMRTGRGGMPGASYADGGRGAQPVSALDLASA HHHHCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLPTAQPESPDARGYRQSPAHYHEEHQSVSARRRELDAASDMQRPQNTDAVWQAADELDR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISAQRASVAQAQAAAPPAAPKAAMVPPAPPPPQQPQPAAAQMAAAQIVAAQATAADVAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KASAAAAALASQAPAYGAGSEAPPLSRSSTRDAAPADASTPAPPAAQPSPNAAAATPPAP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDVGEIVSALRKARASEAASGSPAGAAPVDAAKVIAALLVSRAAKRRVPQAGVNETGQAS CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH QVAGPAEPAPPEDVVSQPTQAAQQLINRLRNGQPAAAPGVVGSDQNGQAPSVDPAAALIE HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TLRAHAARQPAYQAAQAQVAAAQPAVANAAPEDELDDPAAALINLLQSRFSLPEDELEPQ HHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCC PPEAEEEQFAYAEAPANVARLQDDPAAQLMSLLESRSTIPAAAPVIDRPQLEPRPQPQAR CCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PYPQPQPERSRQQQRAPQPQPAFVPTPYEDPATPPLDFIPRPQALRPRPRSIQQDDELDG CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IQDILARLGRRA HHHHHHHHCCCC >Mature Secondary Structure ASRTAGVAFAIAAATVASVLASLPRAAMTAEECLTEPTGDKSDAQHWYYRFDRGTNRRC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCEE WYLKDANGRDVPTSSVRATQQPAAWDFAQPAPPKLSPRRTDGPAQRSGSDAMAEFPQSRL EEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCHHHH RTSVDPRGTPKPQNLAITPTTLTASDASLSRGLDAAPWASAPPQQVDATMGNAAPAATAD HCCCCCCCCCCCCCEEECCCEECCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC DGNADADAMTAGTNDNPATAASKAAKPEAPIPMLMLVVIGALAISGLLASALYRLSRMGR CCCCCCCCEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRKRNGGWQEDARSRRGRTKPRGKAPQSGMRTGRGGMPGASYADGGRGAQPVSALDLASA HHHHCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLPTAQPESPDARGYRQSPAHYHEEHQSVSARRRELDAASDMQRPQNTDAVWQAADELDR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISAQRASVAQAQAAAPPAAPKAAMVPPAPPPPQQPQPAAAQMAAAQIVAAQATAADVAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KASAAAAALASQAPAYGAGSEAPPLSRSSTRDAAPADASTPAPPAAQPSPNAAAATPPAP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDVGEIVSALRKARASEAASGSPAGAAPVDAAKVIAALLVSRAAKRRVPQAGVNETGQAS CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH QVAGPAEPAPPEDVVSQPTQAAQQLINRLRNGQPAAAPGVVGSDQNGQAPSVDPAAALIE HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TLRAHAARQPAYQAAQAQVAAAQPAVANAAPEDELDDPAAALINLLQSRFSLPEDELEPQ HHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCC PPEAEEEQFAYAEAPANVARLQDDPAAQLMSLLESRSTIPAAAPVIDRPQLEPRPQPQAR CCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PYPQPQPERSRQQQRAPQPQPAFVPTPYEDPATPPLDFIPRPQALRPRPRSIQQDDELDG CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IQDILARLGRRA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA