| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340223
Identifier: 146340223
GI number: 146340223
Start: 3444901
End: 3445575
Strand: Reverse
Name: 146340223
Synonym: BRADO3242
Alternate gene names: NA
Gene position: 3445575-3444901 (Counterclockwise)
Preceding gene: 146340224
Following gene: 146340222
Centisome position: 46.21
GC content: 65.48
Gene sequence:
>675_bases ATGCATTGGATCGACCCTGAAAGCCTGCCGGCCGTGACCGGCATTCTCGAGCGCTTCGTGCTCAATCCTCATGGCGAGGT CGATGGCTTCGTCATGCGCGCGGGCGACAAGGACTTGCTCGTTCACACCCCTCCGCACATGGAGGCGGAGCTGACGCGTC ATATCAAGGCCGGCGATGAGGTCGGCGTGCACGCGGTAAAACCGCGTGGTGCTGACTTGCTTGCCGCAGTCGCCATCACT GGGCCGAACGGACATCAGATCGTCGACCAAGGACCGGACGACGACCGTGAGCATCCCGAGCACGACCATCAGAAGATGGA CGCCGAGGGCACGGTGCGGCTGTCGCTGTTCGGGCCGAAGGGCGAGCTGCGCGGCGCCCTGCTCACCGACGGCACCGTCA TCAGGGTCGGGCCCAAGGAAGCCACTGATATCGCCGAGTTGCTCGCGCCCAAGGCCACGCTCGCCGTACGCGGCGACGGC ATCGAGACCTGCTTCGGCCGGGTCATTCATGCCCGCGAGGCCGGCGCGAGCGTGAAGTCCCTGGCGCCGATCAAGCACGC CAAGCCACGCCCCAAGCATGAGCACAAGCGTGAGCATGAGCATGGCCCGAAGCACGGGCCCAAACATGGACCCAAGCACA AGCATGGACCCAGGCATGATCACGCCCACGCGTGA
Upstream 100 bases:
>100_bases ACCGCCGCGCGGCCCGAAGGGCGGTCCCGACCGGCTCGGCCCTCCGCCGCCGCGCGGCTGAGACCTTTCAAACCCAACGA ACAGAACTGAGGAGACAATC
Downstream 100 bases:
>100_bases TCGCGCGTGCTCACGATAGTCAGATGAACCGAGGCCGCCAGCCATGTCCCAGGATGAGATCACCACGCGCCGGGCGAGCC GCGCGCTCGACGCCGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MHWIDPESLPAVTGILERFVLNPHGEVDGFVMRAGDKDLLVHTPPHMEAELTRHIKAGDEVGVHAVKPRGADLLAAVAIT GPNGHQIVDQGPDDDREHPEHDHQKMDAEGTVRLSLFGPKGELRGALLTDGTVIRVGPKEATDIAELLAPKATLAVRGDG IETCFGRVIHAREAGASVKSLAPIKHAKPRPKHEHKREHEHGPKHGPKHGPKHKHGPRHDHAHA
Sequences:
>Translated_224_residues MHWIDPESLPAVTGILERFVLNPHGEVDGFVMRAGDKDLLVHTPPHMEAELTRHIKAGDEVGVHAVKPRGADLLAAVAIT GPNGHQIVDQGPDDDREHPEHDHQKMDAEGTVRLSLFGPKGELRGALLTDGTVIRVGPKEATDIAELLAPKATLAVRGDG IETCFGRVIHAREAGASVKSLAPIKHAKPRPKHEHKREHEHGPKHGPKHGPKHKHGPRHDHAHA >Mature_224_residues MHWIDPESLPAVTGILERFVLNPHGEVDGFVMRAGDKDLLVHTPPHMEAELTRHIKAGDEVGVHAVKPRGADLLAAVAIT GPNGHQIVDQGPDDDREHPEHDHQKMDAEGTVRLSLFGPKGELRGALLTDGTVIRVGPKEATDIAELLAPKATLAVRGDG IETCFGRVIHAREAGASVKSLAPIKHAKPRPKHEHKREHEHGPKHGPKHGPKHKHGPRHDHAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24312; Mature: 24312
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWIDPESLPAVTGILERFVLNPHGEVDGFVMRAGDKDLLVHTPPHMEAELTRHIKAGDE CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHCCCC VGVHAVKPRGADLLAAVAITGPNGHQIVDQGPDDDREHPEHDHQKMDAEGTVRLSLFGPK CCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCC GELRGALLTDGTVIRVGPKEATDIAELLAPKATLAVRGDGIETCFGRVIHAREAGASVKS CCCCEEEECCCEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHH LAPIKHAKPRPKHEHKREHEHGPKHGPKHGPKHKHGPRHDHAHA HCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHWIDPESLPAVTGILERFVLNPHGEVDGFVMRAGDKDLLVHTPPHMEAELTRHIKAGDE CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHCCCC VGVHAVKPRGADLLAAVAITGPNGHQIVDQGPDDDREHPEHDHQKMDAEGTVRLSLFGPK CCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCC GELRGALLTDGTVIRVGPKEATDIAELLAPKATLAVRGDGIETCFGRVIHAREAGASVKS CCCCEEEECCCEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHH LAPIKHAKPRPKHEHKREHEHGPKHGPKHGPKHKHGPRHDHAHA HCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA