| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340196
Identifier: 146340196
GI number: 146340196
Start: 3411293
End: 3412402
Strand: Direct
Name: 146340196
Synonym: BRADO3213
Alternate gene names: NA
Gene position: 3411293-3412402 (Clockwise)
Preceding gene: 146340195
Following gene: 146340197
Centisome position: 45.75
GC content: 63.15
Gene sequence:
>1110_bases ATGGTCGAGTCGATTTATGCAGGCGTTGGGTCCGCAACTAAGGAGCCGAAGCTTCCCGAACCGATTGAACCGCACTTCCG CAAGAGCTCCGGCTACATCCCGAGCCCCGCGTTGAAGGCTGCGGTCGACGTTGCGATGATCCTGGGCCAGCCGCTTTTGC TCACGGGTGAGCCCGGCACCGGCAAGACGACGCTCGCCCGCGCGGTCGCCGACGAATTGTTCGACGGACGCTATCTCGAA ATGCAGGTCAAATCCTCTACCAGCCGCACCGATCTGCTCTATCGGATCGACGAGCTGGGACGCTTTCGCGACGCGCAACC GCAGCGCATGACCAAGCCGACGATCGCCTATGTCGAGTTCCAACCGCTTGGCGAGGCGATCATCCGCTCTTGCGGTCCGG ATGCTCCGCTCAGCGACAGGGCCGGGCGTCCGCTCAGCGGTGACGAGCCGGTTCTCGATGAGATTTTCGGCAAACGTCCG GGTCGTCCCGACGGCGCTCCGACCACACGGATGCTGCTGCCTCATGCGACGAATTGGACGAGGCAGGAACGCTGGGTCGT GCTGATCGACGAGATCGACAAGGCGCCGCGCGACGCGCCGAACGATCTTCTCGAGGAGTTCGAACGTCTCTCGTTCGCGA TCCCGGAGCTAGGCCTGCGCGTCGATCCACCCGAGAAGGCGCCAAGACCGGTGGTGTTCATCACGAGCAACAGCGAGAAG AGCCTGCCCGAGGCATTTCTGCGGCGCTGCGCCTTCCACCACATCGAGTTTCCCGACAACGACATGCTGCGCCGGATCAT CGAAAGCCGCCTCGGCGGCCTGGTGTTTTCCGACGAAGACCAGCTCGACCAGCTGCTCACGCTGTTCAATGACCTGCGAA AGGCGCTGCGCAAGCCGCCGAGCACATCCGAATTGTTGAACTCGCTCCGGCTGCTCAAGGCGAACCCCAAGATTGTCGCC ACGACAGACTTGCGCGACCACGTCGACGAACTCAAGAGTCAGCTGAGCGCACTCGCGAAGATGCCGGAAGATATCGTCAG AGCCAAGACGATCATCGATGCCTGGGCCGCGGACCCGGCCCGGAGCCGCGCCCAGGCAGCAAAGCCGTGA
Upstream 100 bases:
>100_bases GAGCTCGACCAGATGCTCGGCGGCCCGCGAGAGTTCACAGCTTCCGACCTGAAGACGGTCGTCCGTAAAGTGCGTCGGAT GGCGAGATAGAGGGCTTTCG
Downstream 100 bases:
>100_bases CGGCCAGGGCGGATTGGCTCGACGATCCGCTGGTGCTGTGCACCTTCCTGCGCGAACGCGGTCTGCGTCTGGGGACCGGC GAGGCCTTGCGGGTCAGCGC
Product: putative AAA ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA ATPase; AAA Family ATPase; ATPase AAA Family Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; ATPase-Like Protein; ATPase Aaa Family; Aaa ATPase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; ClpA/ClpB Family Protein; AAA ATPase Family Protein; ATPase Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MVESIYAGVGSATKEPKLPEPIEPHFRKSSGYIPSPALKAAVDVAMILGQPLLLTGEPGTGKTTLARAVADELFDGRYLE MQVKSSTSRTDLLYRIDELGRFRDAQPQRMTKPTIAYVEFQPLGEAIIRSCGPDAPLSDRAGRPLSGDEPVLDEIFGKRP GRPDGAPTTRMLLPHATNWTRQERWVVLIDEIDKAPRDAPNDLLEEFERLSFAIPELGLRVDPPEKAPRPVVFITSNSEK SLPEAFLRRCAFHHIEFPDNDMLRRIIESRLGGLVFSDEDQLDQLLTLFNDLRKALRKPPSTSELLNSLRLLKANPKIVA TTDLRDHVDELKSQLSALAKMPEDIVRAKTIIDAWAADPARSRAQAAKP
Sequences:
>Translated_369_residues MVESIYAGVGSATKEPKLPEPIEPHFRKSSGYIPSPALKAAVDVAMILGQPLLLTGEPGTGKTTLARAVADELFDGRYLE MQVKSSTSRTDLLYRIDELGRFRDAQPQRMTKPTIAYVEFQPLGEAIIRSCGPDAPLSDRAGRPLSGDEPVLDEIFGKRP GRPDGAPTTRMLLPHATNWTRQERWVVLIDEIDKAPRDAPNDLLEEFERLSFAIPELGLRVDPPEKAPRPVVFITSNSEK SLPEAFLRRCAFHHIEFPDNDMLRRIIESRLGGLVFSDEDQLDQLLTLFNDLRKALRKPPSTSELLNSLRLLKANPKIVA TTDLRDHVDELKSQLSALAKMPEDIVRAKTIIDAWAADPARSRAQAAKP >Mature_369_residues MVESIYAGVGSATKEPKLPEPIEPHFRKSSGYIPSPALKAAVDVAMILGQPLLLTGEPGTGKTTLARAVADELFDGRYLE MQVKSSTSRTDLLYRIDELGRFRDAQPQRMTKPTIAYVEFQPLGEAIIRSCGPDAPLSDRAGRPLSGDEPVLDEIFGKRP GRPDGAPTTRMLLPHATNWTRQERWVVLIDEIDKAPRDAPNDLLEEFERLSFAIPELGLRVDPPEKAPRPVVFITSNSEK SLPEAFLRRCAFHHIEFPDNDMLRRIIESRLGGLVFSDEDQLDQLLTLFNDLRKALRKPPSTSELLNSLRLLKANPKIVA TTDLRDHVDELKSQLSALAKMPEDIVRAKTIIDAWAADPARSRAQAAKP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41064; Mature: 41064
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESIYAGVGSATKEPKLPEPIEPHFRKSSGYIPSPALKAAVDVAMILGQPLLLTGEPGT CCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC GKTTLARAVADELFDGRYLEMQVKSSTSRTDLLYRIDELGRFRDAQPQRMTKPTIAYVEF CHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE QPLGEAIIRSCGPDAPLSDRAGRPLSGDEPVLDEIFGKRPGRPDGAPTTRMLLPHATNWT CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCC RQERWVVLIDEIDKAPRDAPNDLLEEFERLSFAIPELGLRVDPPEKAPRPVVFITSNSEK CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC SLPEAFLRRCAFHHIEFPDNDMLRRIIESRLGGLVFSDEDQLDQLLTLFNDLRKALRKPP CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHCCC STSELLNSLRLLKANPKIVATTDLRDHVDELKSQLSALAKMPEDIVRAKTIIDAWAADPA CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH RSRAQAAKP HHHHCCCCC >Mature Secondary Structure MVESIYAGVGSATKEPKLPEPIEPHFRKSSGYIPSPALKAAVDVAMILGQPLLLTGEPGT CCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC GKTTLARAVADELFDGRYLEMQVKSSTSRTDLLYRIDELGRFRDAQPQRMTKPTIAYVEF CHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE QPLGEAIIRSCGPDAPLSDRAGRPLSGDEPVLDEIFGKRPGRPDGAPTTRMLLPHATNWT CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCCC RQERWVVLIDEIDKAPRDAPNDLLEEFERLSFAIPELGLRVDPPEKAPRPVVFITSNSEK CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC SLPEAFLRRCAFHHIEFPDNDMLRRIIESRLGGLVFSDEDQLDQLLTLFNDLRKALRKPP CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHCCC STSELLNSLRLLKANPKIVATTDLRDHVDELKSQLSALAKMPEDIVRAKTIIDAWAADPA CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH RSRAQAAKP HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA