| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340195
Identifier: 146340195
GI number: 146340195
Start: 3409783
End: 3411282
Strand: Direct
Name: 146340195
Synonym: BRADO3212
Alternate gene names: NA
Gene position: 3409783-3411282 (Clockwise)
Preceding gene: 146340194
Following gene: 146340196
Centisome position: 45.73
GC content: 60.93
Gene sequence:
>1500_bases ATGCCTGGCGATATCGAGACGTGTCTCACCGAGGTTCGCTGCAAGACCACCTCCGGATATGGGTCTGGCTACTTGATCGC GCCTGATCTCGTGCTGACCGCTTGCCATGTGATTGCGGACTTGACCCGGTCGCCTCCTGATGACCTCGACATCGATATCA GGACCATCGCGCATTTTAATGCGCGCCTTCCATTTCAGAAGGCCAAGCTGATCTGGCCGCCGCCCGCGCGATGGCAGGAG CTTGCCGATCTCGACATTGCGTTGCTGGAGATCACCCCGGACCCGGTTACCAAGAAGGCTGCACAACCGATCCACTTCGG AACGGACGGCTTGCCGCGCGACAAGATGCTCCAAATCAGCTTCGCCGGTTTCCCGAGACTGATGACGATCAGAAACAGCG ACAATCGGGACGTCAGACAGCTGTTCGGAGAAGCCGCGCCCGCCACCGGCGTCAAGCAGAACATCTATACGATCGACATC AACAAGGGACGGCCTGCGAAGTCTGACGAAGAATGGAAGGGCGCGTCGGGCGCTGCGGTGTTCTCGCAAGGCCAGCTGAT TGCTGTGCTGACCGTCAAGATCGTGGACGGCATGGACGATTTCAGCGCGATGCGCCTCGATGCCGCTCTTCGCGATCCCG ATTTCCGCCAACGCGTTGCCGCGTCACAGGCGGCGATTTCGACCAAAGGCGCCGCCGAATCCAACCTCAATCTGGGCCGG CTCGTCTGCCTGGTCGATCGCGATCCACAAGACAGCGCATTTCGAACCGCGTATCGAAAGCTGCTCGACGACAGGCGGGT TCGGCCGTTGTGCTGCCTGATCTATGGCGGCGCCCGGCATCGGCCGATCGACCTGGCTGACCGCTTCGCGCTGGTGACGA TCCCTGAACTGCGCAAGCTGAGGCCTGGCGAGACATCGCCATTCAAGCCGATAAATTGGCCCAGCAGCGAGGTCGACGTT ACCAACGGTCTCGCAACCTTGCGCGCGCTGCTCTGGAATGTTCTGTGCGACGAGGATGGCAGTGAGGTTCCTGTCGAGCC GGCTGCGTTCAGGGAGCGTCTTTGTGACGAGAGCCGCCCGCACTTCTTCGTCTCGGAGCTTTCGCCAACGCAGCTGACGG CGGAAAGCGCGGTGTTGTGGAGCGCCTGGCTCGCGTTTCTCGAATCTGTTGCGGTCTACGAGCTGTCACGTCCGCCGCTG CACATCTTCCTGGTCACCGATGCAACGCGCGCTCAGATCGAGGCGTGGCTGAAGCAGATTACGCCGGCGAAGGAGGTTGC GCTGCCGTCGTTTGCTGAGCTTGGCGCCTGCAAATGGATCGATTTCGGCGAATGGATCGATCGTCGAGTTCCCAAAATCG TGCCGGCGTTGGCCGCGGAGGCGACGCAAATCAAGGATGATCTCGAGAGTGAGCTCGACCAGATGCTCGGCGGCCCGCGA GAGTTCACAGCTTCCGACCTGAAGACGGTCGTCCGTAAAGTGCGTCGGATGGCGAGATAG
Upstream 100 bases:
>100_bases CAGCCATAAGCTCAAGCTGAAGCTCACGCCGGTCGACAAGGACGGCAATCAGTTCATGGTTCGCGACACGGTTGGCAAAA TGCCAGAGTAGCACGCGGCA
Downstream 100 bases:
>100_bases AGGGCTTTCGATGGTCGAGTCGATTTATGCAGGCGTTGGGTCCGCAACTAAGGAGCCGAAGCTTCCCGAACCGATTGAAC CGCACTTCCGCAAGAGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MPGDIETCLTEVRCKTTSGYGSGYLIAPDLVLTACHVIADLTRSPPDDLDIDIRTIAHFNARLPFQKAKLIWPPPARWQE LADLDIALLEITPDPVTKKAAQPIHFGTDGLPRDKMLQISFAGFPRLMTIRNSDNRDVRQLFGEAAPATGVKQNIYTIDI NKGRPAKSDEEWKGASGAAVFSQGQLIAVLTVKIVDGMDDFSAMRLDAALRDPDFRQRVAASQAAISTKGAAESNLNLGR LVCLVDRDPQDSAFRTAYRKLLDDRRVRPLCCLIYGGARHRPIDLADRFALVTIPELRKLRPGETSPFKPINWPSSEVDV TNGLATLRALLWNVLCDEDGSEVPVEPAAFRERLCDESRPHFFVSELSPTQLTAESAVLWSAWLAFLESVAVYELSRPPL HIFLVTDATRAQIEAWLKQITPAKEVALPSFAELGACKWIDFGEWIDRRVPKIVPALAAEATQIKDDLESELDQMLGGPR EFTASDLKTVVRKVRRMAR
Sequences:
>Translated_499_residues MPGDIETCLTEVRCKTTSGYGSGYLIAPDLVLTACHVIADLTRSPPDDLDIDIRTIAHFNARLPFQKAKLIWPPPARWQE LADLDIALLEITPDPVTKKAAQPIHFGTDGLPRDKMLQISFAGFPRLMTIRNSDNRDVRQLFGEAAPATGVKQNIYTIDI NKGRPAKSDEEWKGASGAAVFSQGQLIAVLTVKIVDGMDDFSAMRLDAALRDPDFRQRVAASQAAISTKGAAESNLNLGR LVCLVDRDPQDSAFRTAYRKLLDDRRVRPLCCLIYGGARHRPIDLADRFALVTIPELRKLRPGETSPFKPINWPSSEVDV TNGLATLRALLWNVLCDEDGSEVPVEPAAFRERLCDESRPHFFVSELSPTQLTAESAVLWSAWLAFLESVAVYELSRPPL HIFLVTDATRAQIEAWLKQITPAKEVALPSFAELGACKWIDFGEWIDRRVPKIVPALAAEATQIKDDLESELDQMLGGPR EFTASDLKTVVRKVRRMAR >Mature_498_residues PGDIETCLTEVRCKTTSGYGSGYLIAPDLVLTACHVIADLTRSPPDDLDIDIRTIAHFNARLPFQKAKLIWPPPARWQEL ADLDIALLEITPDPVTKKAAQPIHFGTDGLPRDKMLQISFAGFPRLMTIRNSDNRDVRQLFGEAAPATGVKQNIYTIDIN KGRPAKSDEEWKGASGAAVFSQGQLIAVLTVKIVDGMDDFSAMRLDAALRDPDFRQRVAASQAAISTKGAAESNLNLGRL VCLVDRDPQDSAFRTAYRKLLDDRRVRPLCCLIYGGARHRPIDLADRFALVTIPELRKLRPGETSPFKPINWPSSEVDVT NGLATLRALLWNVLCDEDGSEVPVEPAAFRERLCDESRPHFFVSELSPTQLTAESAVLWSAWLAFLESVAVYELSRPPLH IFLVTDATRAQIEAWLKQITPAKEVALPSFAELGACKWIDFGEWIDRRVPKIVPALAAEATQIKDDLESELDQMLGGPRE FTASDLKTVVRKVRRMAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55403; Mature: 55272
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDIETCLTEVRCKTTSGYGSGYLIAPDLVLTACHVIADLTRSPPDDLDIDIRTIAHFN CCCCHHHHHHHHHHEECCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC ARLPFQKAKLIWPPPARWQELADLDIALLEITPDPVTKKAAQPIHFGTDGLPRDKMLQIS CCCCHHHCCEECCCCHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEE FAGFPRLMTIRNSDNRDVRQLFGEAAPATGVKQNIYTIDINKGRPAKSDEEWKGASGAAV ECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FSQGQLIAVLTVKIVDGMDDFSAMRLDAALRDPDFRQRVAASQAAISTKGAAESNLNLGR ECCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE LVCLVDRDPQDSAFRTAYRKLLDDRRVRPLCCLIYGGARHRPIDLADRFALVTIPELRKL EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCEEEEECHHHHHC RPGETSPFKPINWPSSEVDVTNGLATLRALLWNVLCDEDGSEVPVEPAAFRERLCDESRP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC HFFVSELSPTQLTAESAVLWSAWLAFLESVAVYELSRPPLHIFLVTDATRAQIEAWLKQI CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHC TPAKEVALPSFAELGACKWIDFGEWIDRRVPKIVPALAAEATQIKDDLESELDQMLGGPR CCHHHHCCCCHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFTASDLKTVVRKVRRMAR CCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PGDIETCLTEVRCKTTSGYGSGYLIAPDLVLTACHVIADLTRSPPDDLDIDIRTIAHFN CCCHHHHHHHHHHEECCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC ARLPFQKAKLIWPPPARWQELADLDIALLEITPDPVTKKAAQPIHFGTDGLPRDKMLQIS CCCCHHHCCEECCCCHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEE FAGFPRLMTIRNSDNRDVRQLFGEAAPATGVKQNIYTIDINKGRPAKSDEEWKGASGAAV ECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FSQGQLIAVLTVKIVDGMDDFSAMRLDAALRDPDFRQRVAASQAAISTKGAAESNLNLGR ECCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE LVCLVDRDPQDSAFRTAYRKLLDDRRVRPLCCLIYGGARHRPIDLADRFALVTIPELRKL EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHCEEEEECHHHHHC RPGETSPFKPINWPSSEVDVTNGLATLRALLWNVLCDEDGSEVPVEPAAFRERLCDESRP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC HFFVSELSPTQLTAESAVLWSAWLAFLESVAVYELSRPPLHIFLVTDATRAQIEAWLKQI CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHC TPAKEVALPSFAELGACKWIDFGEWIDRRVPKIVPALAAEATQIKDDLESELDQMLGGPR CCHHHHCCCCHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFTASDLKTVVRKVRRMAR CCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA