| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146340187
Identifier: 146340187
GI number: 146340187
Start: 3403738
End: 3405036
Strand: Direct
Name: 146340187
Synonym: BRADO3203
Alternate gene names: NA
Gene position: 3403738-3405036 (Clockwise)
Preceding gene: 146340176
Following gene: 146340188
Centisome position: 45.65
GC content: 64.74
Gene sequence:
>1299_bases ATGGAGGACCCAATGGCGGACGTTGTCGTGATCGGAGCGGGGCTGAGCGGCTCCCTGATGGCCTATGAATTGCTGCCCCA GATGCGAAAGGAGGATCGCGTGACCGTCATCTCGCAGGGGTCCTCGTATCATTTCGTGCCGTCCAATCCCTGGGTGGCTG TGGGCTGGCGCAAGCGCGACGACATCGAGATCGACCTCGTCGATGTCATGCAGCGCAAGGGCATCCGCCTGCTGACTCAG GGCGCCAAACGGGTGCACCCAGACGACAACCAGGTCGAACTGACGGACGGCGCGATGGTCGCCTACGACTATTTGGTCGT CGCCACCGGGCCCGAACTCGCCTTCGACGAGATCCCGGGCCTCGGCCCCGACGGCCACACGCAGTCGGTGTGCCATGTCG ATCACGCCGCCCATGCCAAGGCCGCCTTCGACAAGCTGGCCGAGACACCCGGTCCCGTCATCGTCGGCGCGGTGCAGGGT GCGTCCTGCTTCGGACCGGCTTACGAATTCCTCTTCATCCTCGAAACCGAGTTGCGCCGGCGCAAGATGCGCGACCGGGT GCCGATGACCTTCGTGACCTCGGAGCCCTATATCGGCCATCTCGGGCTGGACGGCGTCGGCGACACCAAGGGGCTGCTCG AAAGCGAGATGCGCGAGAAGCACATCAAGTGGATCACCAGTGCGCGCGTCACCAAGGTCGAGGACGGCCGCATGTTCGTG GAGGAGGTGGCCGACGACGGCTCGGTGCGGAAGACCCATGAGCTGCCGTTCGCCTATTCGATGATGCTGCCGGCGTTCCG CGGCGTCGGCGCCGTCAAGGGCATCGACAAGCTGACCAATCCGCGCGGATTCGTTGTTGTCGACAAGCACCAGCGCAACC CGGCCTATCCCAACGTGTTCGCCATCGGCGTCTGCGTCGCGATCCCGCCGATTGGGCCGACGCCGGTGCCGGTCGGCGTG CCGAAGACCGGCTTCATGATCGAGTCGATGGTCACGGCCACCGCGCTGAACATCGGCGCGCTGCTGCGCGGCGAGGTGCC GAAGGCGCAGCCGACCTGGAATGCGATCTGCCTTGCAGACTTCGGCGATTCCGGCGTCGCCTTCCTGGCGCAGCCACAGA TCCCGCCCCGCAACGTCAACTGGTCGTCGAAGGGGGAGTGGGTGCATTACGCCAAGGTCGCCTTTGAGAAGTATTTCCTG CGCAAGATGAAGCGCGGCACGCCGGAGCCCTTCTACGAGAAGTTCCTGCTCGACCGGCTCAACATCGGCAAGATCAAGGA AGTCAGGACGGGCACATGA
Upstream 100 bases:
>100_bases AGCATTAAATTTCATAGTTGCATATATACAGATATTCAAATATATAGTCAAGGCCGGCCCGGAAGGTCGCGGCTGAGCGA GACAAGAACAAAGCAAGGCG
Downstream 100 bases:
>100_bases GCGAGACCTTCCAACTGGTGTGCGGCCATTGCGGGCAGATCAACCGGCTGCCCGCGGGCCGGGCGCCCACCCAGGGCAAA TGCGGCAAGTGCCACGCGCC
Product: sulfide-quinone reductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; Sulfide-Quinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MEDPMADVVVIGAGLSGSLMAYELLPQMRKEDRVTVISQGSSYHFVPSNPWVAVGWRKRDDIEIDLVDVMQRKGIRLLTQ GAKRVHPDDNQVELTDGAMVAYDYLVVATGPELAFDEIPGLGPDGHTQSVCHVDHAAHAKAAFDKLAETPGPVIVGAVQG ASCFGPAYEFLFILETELRRRKMRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMREKHIKWITSARVTKVEDGRMFV EEVADDGSVRKTHELPFAYSMMLPAFRGVGAVKGIDKLTNPRGFVVVDKHQRNPAYPNVFAIGVCVAIPPIGPTPVPVGV PKTGFMIESMVTATALNIGALLRGEVPKAQPTWNAICLADFGDSGVAFLAQPQIPPRNVNWSSKGEWVHYAKVAFEKYFL RKMKRGTPEPFYEKFLLDRLNIGKIKEVRTGT
Sequences:
>Translated_432_residues MEDPMADVVVIGAGLSGSLMAYELLPQMRKEDRVTVISQGSSYHFVPSNPWVAVGWRKRDDIEIDLVDVMQRKGIRLLTQ GAKRVHPDDNQVELTDGAMVAYDYLVVATGPELAFDEIPGLGPDGHTQSVCHVDHAAHAKAAFDKLAETPGPVIVGAVQG ASCFGPAYEFLFILETELRRRKMRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMREKHIKWITSARVTKVEDGRMFV EEVADDGSVRKTHELPFAYSMMLPAFRGVGAVKGIDKLTNPRGFVVVDKHQRNPAYPNVFAIGVCVAIPPIGPTPVPVGV PKTGFMIESMVTATALNIGALLRGEVPKAQPTWNAICLADFGDSGVAFLAQPQIPPRNVNWSSKGEWVHYAKVAFEKYFL RKMKRGTPEPFYEKFLLDRLNIGKIKEVRTGT >Mature_432_residues MEDPMADVVVIGAGLSGSLMAYELLPQMRKEDRVTVISQGSSYHFVPSNPWVAVGWRKRDDIEIDLVDVMQRKGIRLLTQ GAKRVHPDDNQVELTDGAMVAYDYLVVATGPELAFDEIPGLGPDGHTQSVCHVDHAAHAKAAFDKLAETPGPVIVGAVQG ASCFGPAYEFLFILETELRRRKMRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMREKHIKWITSARVTKVEDGRMFV EEVADDGSVRKTHELPFAYSMMLPAFRGVGAVKGIDKLTNPRGFVVVDKHQRNPAYPNVFAIGVCVAIPPIGPTPVPVGV PKTGFMIESMVTATALNIGALLRGEVPKAQPTWNAICLADFGDSGVAFLAQPQIPPRNVNWSSKGEWVHYAKVAFEKYFL RKMKRGTPEPFYEKFLLDRLNIGKIKEVRTGT
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115534373, Length=294, Percent_Identity=23.469387755102, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24657386, Length=289, Percent_Identity=24.9134948096886, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24657391, Length=289, Percent_Identity=24.9134948096886, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47568; Mature: 47568
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDPMADVVVIGAGLSGSLMAYELLPQMRKEDRVTVISQGSSYHFVPSNPWVAVGWRKRD CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEEECCCCC DIEIDLVDVMQRKGIRLLTQGAKRVHPDDNQVELTDGAMVAYDYLVVATGPELAFDEIPG CCEEHHHHHHHHCCCEEECCCHHHCCCCCCEEEEECCEEEEEEEEEEECCCCCHHHHCCC LGPDGHTQSVCHVDHAAHAKAAFDKLAETPGPVIVGAVQGASCFGPAYEFLFILETELRR CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH RKMRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMREKHIKWITSARVTKVEDGRMFV HHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH EEVADDGSVRKTHELPFAYSMMLPAFRGVGAVKGIDKLTNPRGFVVVDKHQRNPAYPNVF HHHCCCCCCEEHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCE AIGVCVAIPPIGPTPVPVGVPKTGFMIESMVTATALNIGALLRGEVPKAQPTWNAICLAD EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE FGDSGVAFLAQPQIPPRNVNWSSKGEWVHYAKVAFEKYFLRKMKRGTPEPFYEKFLLDRL CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC NIGKIKEVRTGT CCCCCCCCCCCC >Mature Secondary Structure MEDPMADVVVIGAGLSGSLMAYELLPQMRKEDRVTVISQGSSYHFVPSNPWVAVGWRKRD CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEEECCCCC DIEIDLVDVMQRKGIRLLTQGAKRVHPDDNQVELTDGAMVAYDYLVVATGPELAFDEIPG CCEEHHHHHHHHCCCEEECCCHHHCCCCCCEEEEECCEEEEEEEEEEECCCCCHHHHCCC LGPDGHTQSVCHVDHAAHAKAAFDKLAETPGPVIVGAVQGASCFGPAYEFLFILETELRR CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH RKMRDRVPMTFVTSEPYIGHLGLDGVGDTKGLLESEMREKHIKWITSARVTKVEDGRMFV HHHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH EEVADDGSVRKTHELPFAYSMMLPAFRGVGAVKGIDKLTNPRGFVVVDKHQRNPAYPNVF HHHCCCCCCEEHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCE AIGVCVAIPPIGPTPVPVGVPKTGFMIESMVTATALNIGALLRGEVPKAQPTWNAICLAD EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE FGDSGVAFLAQPQIPPRNVNWSSKGEWVHYAKVAFEKYFLRKMKRGTPEPFYEKFLLDRL CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC NIGKIKEVRTGT CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA