| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340144
Identifier: 146340144
GI number: 146340144
Start: 3359899
End: 3361194
Strand: Direct
Name: 146340144
Synonym: BRADO3159
Alternate gene names: NA
Gene position: 3359899-3361194 (Clockwise)
Preceding gene: 146340142
Following gene: 146340149
Centisome position: 45.06
GC content: 65.28
Gene sequence:
>1296_bases ATGGGAATAGTCATGAGCACCGCGCTTCGTCGTAACGTGTCGATCCTCAGCCTCATGCTTGTATCGGCGAGCGCCTCGGC CGCCGAGGTTGACGATCTCAACGCCCGCTTGGCGAAGTTGGAACGGGAGAACGCGGCGATGCGGATGGAGAACGCGGCGC TGCGCGAGAACAAGCGGTTACGCGACGAAAACGGCAGGCTGCGCTCGGCGCAGGATGCCGAGGCTGTGCGATCCGCCACG TCCGGCGGCTTCGGCCGATCTGCCGCCGATCGAAGCGCGGCGCCCGCTCCGGCGCGCCTTGGACTGAACAACAAAGATCC TTATCGCAGCTTTGCGTCGGCGGATGGTCCCGCCGCGTACACGGCGGCGGCTCGTCCCGCGGGGGGCGTGCTGAAGATCT GGGGTGAGGGCGGCGCCATCTGGAGCGGGGGCGATCGGTTTGTCCAGGATGCGGGCACGCCGCTCGCTTTTTTTCCCAAC ACGCCCGTGTCGCCGCCGCTCGATCTGACGCCCAAGGTCGGTTGGGAGGCCGCCACCGGATTCGACTATCTGATCGCCGG CTCGCCGTGGCACGTCAGCGGCCAGCTCCGCTACGGTCAGAGCGGCCAGGCCAGCGCACAAATCGCGTCATCCGGACGGC TTGATCTCGGACAGGGCCGCGTCATCACCGCGTCCGACACGTTCGGCGCAACCTATCAGGAATCGCGTTGGCTGGCCGAC ATCGCCATCGGGCGCGACGTGTTTGCGACCGGGCCGGCGGCGCTTCAGGTCAAGGGGGGACTGCGGCTGCTCGACTTCGA GACCCGCGCGACCAACTCCGATCTGCTGCGACAGAATGCGAGCATCGTCAATTTCGGCAACGCGGTCTTCACCAATGTCG ACGTCGCGCAGGTGAACGACGGCGAAAATCGCAACAGCTTTCTTGGGGCCGGCCCGCGTGTCGGCGTGGAAGGCTCGATT CCCTTCGCCGGCCGCTGGTCGCTCGATTATCTCAGCGACATTGCCGTTCTGTTCGGCGTGCAGCGCAACGTCGTCAACAG CAGGTCCCAGTCATCCGCCAGCGTGCCCGGGCTGGCGCAACCCGGCACCAGCGCCACCTTCTCAATGGAGCGTAACACTG CGCTGTTCAATGCCGATCTGCAGTTCGGCCTGTCCTATGGGATCACCGACAACGTCAAGCTCGGCGGAAGCTACCGAGTC GACGCCGTGATCAACACGCAGGATACGGCCTTCACGCCGAACCGCTATACGCACGGTCCGCGATTGACCGTGACGGGACA ATTCGATGCGCGTTGA
Upstream 100 bases:
>100_bases GAGGCCACGCAGGCCCAATCTTGGTCGGTCTCCATCATTTGGCGGAGGCGCCGGGCGGTTGCGCTTGGCAAGCAGCAATC TCGCTGTTTTTCGATTGCAG
Downstream 100 bases:
>100_bases CGGCCTGAACTGAACCGCGCCGCTTCGGGTTCAGCCGGTGTTCGATGATCCGGCTGGAGATCAGGCCTCGATCGCATGCT TGATCCGCTGCCGGGTCAGC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MGIVMSTALRRNVSILSLMLVSASASAAEVDDLNARLAKLERENAAMRMENAALRENKRLRDENGRLRSAQDAEAVRSAT SGGFGRSAADRSAAPAPARLGLNNKDPYRSFASADGPAAYTAAARPAGGVLKIWGEGGAIWSGGDRFVQDAGTPLAFFPN TPVSPPLDLTPKVGWEAATGFDYLIAGSPWHVSGQLRYGQSGQASAQIASSGRLDLGQGRVITASDTFGATYQESRWLAD IAIGRDVFATGPAALQVKGGLRLLDFETRATNSDLLRQNASIVNFGNAVFTNVDVAQVNDGENRNSFLGAGPRVGVEGSI PFAGRWSLDYLSDIAVLFGVQRNVVNSRSQSSASVPGLAQPGTSATFSMERNTALFNADLQFGLSYGITDNVKLGGSYRV DAVINTQDTAFTPNRYTHGPRLTVTGQFDAR
Sequences:
>Translated_431_residues MGIVMSTALRRNVSILSLMLVSASASAAEVDDLNARLAKLERENAAMRMENAALRENKRLRDENGRLRSAQDAEAVRSAT SGGFGRSAADRSAAPAPARLGLNNKDPYRSFASADGPAAYTAAARPAGGVLKIWGEGGAIWSGGDRFVQDAGTPLAFFPN TPVSPPLDLTPKVGWEAATGFDYLIAGSPWHVSGQLRYGQSGQASAQIASSGRLDLGQGRVITASDTFGATYQESRWLAD IAIGRDVFATGPAALQVKGGLRLLDFETRATNSDLLRQNASIVNFGNAVFTNVDVAQVNDGENRNSFLGAGPRVGVEGSI PFAGRWSLDYLSDIAVLFGVQRNVVNSRSQSSASVPGLAQPGTSATFSMERNTALFNADLQFGLSYGITDNVKLGGSYRV DAVINTQDTAFTPNRYTHGPRLTVTGQFDAR >Mature_430_residues GIVMSTALRRNVSILSLMLVSASASAAEVDDLNARLAKLERENAAMRMENAALRENKRLRDENGRLRSAQDAEAVRSATS GGFGRSAADRSAAPAPARLGLNNKDPYRSFASADGPAAYTAAARPAGGVLKIWGEGGAIWSGGDRFVQDAGTPLAFFPNT PVSPPLDLTPKVGWEAATGFDYLIAGSPWHVSGQLRYGQSGQASAQIASSGRLDLGQGRVITASDTFGATYQESRWLADI AIGRDVFATGPAALQVKGGLRLLDFETRATNSDLLRQNASIVNFGNAVFTNVDVAQVNDGENRNSFLGAGPRVGVEGSIP FAGRWSLDYLSDIAVLFGVQRNVVNSRSQSSASVPGLAQPGTSATFSMERNTALFNADLQFGLSYGITDNVKLGGSYRVD AVINTQDTAFTPNRYTHGPRLTVTGQFDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45601; Mature: 45470
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVMSTALRRNVSILSLMLVSASASAAEVDDLNARLAKLERENAAMRMENAALRENKRL CCEEHHHHHHCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDENGRLRSAQDAEAVRSATSGGFGRSAADRSAAPAPARLGLNNKDPYRSFASADGPAAY CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE TAAARPAGGVLKIWGEGGAIWSGGDRFVQDAGTPLAFFPNTPVSPPLDLTPKVGWEAATG EECCCCCCCEEEEECCCCEEECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECCC FDYLIAGSPWHVSGQLRYGQSGQASAQIASSGRLDLGQGRVITASDTFGATYQESRWLAD CEEEEECCCEEEEEEEEECCCCCCCEEECCCCCEECCCCEEEEECCCCCCCHHCCCEEEE IAIGRDVFATGPAALQVKGGLRLLDFETRATNSDLLRQNASIVNFGNAVFTNVDVAQVND EEECCCEEECCCCEEEEECCEEEEEEECCCCCHHHHHCCCCEEECCCEEEECCEEEEECC GENRNSFLGAGPRVGVEGSIPFAGRWSLDYLSDIAVLFGVQRNVVNSRSQSSASVPGLAQ CCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PGTSATFSMERNTALFNADLQFGLSYGITDNVKLGGSYRVDAVINTQDTAFTPNRYTHGP CCCCEEEEEECCCEEEECCEEECEEECCCCCEEECCCEEEEEEEECCCCEECCCCCCCCC RLTVTGQFDAR EEEEEECCCCC >Mature Secondary Structure GIVMSTALRRNVSILSLMLVSASASAAEVDDLNARLAKLERENAAMRMENAALRENKRL CEEHHHHHHCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDENGRLRSAQDAEAVRSATSGGFGRSAADRSAAPAPARLGLNNKDPYRSFASADGPAAY CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE TAAARPAGGVLKIWGEGGAIWSGGDRFVQDAGTPLAFFPNTPVSPPLDLTPKVGWEAATG EECCCCCCCEEEEECCCCEEECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECCC FDYLIAGSPWHVSGQLRYGQSGQASAQIASSGRLDLGQGRVITASDTFGATYQESRWLAD CEEEEECCCEEEEEEEEECCCCCCCEEECCCCCEECCCCEEEEECCCCCCCHHCCCEEEE IAIGRDVFATGPAALQVKGGLRLLDFETRATNSDLLRQNASIVNFGNAVFTNVDVAQVND EEECCCEEECCCCEEEEECCEEEEEEECCCCCHHHHHCCCCEEECCCEEEECCEEEEECC GENRNSFLGAGPRVGVEGSIPFAGRWSLDYLSDIAVLFGVQRNVVNSRSQSSASVPGLAQ CCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PGTSATFSMERNTALFNADLQFGLSYGITDNVKLGGSYRVDAVINTQDTAFTPNRYTHGP CCCCEEEEEECCCEEEECCEEECEEECCCCCEEECCCEEEEEEEECCCCEECCCCCCCCC RLTVTGQFDAR EEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA