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The map label for this gene is yagI [C]

Identifier: 146340116

GI number: 146340116

Start: 3327841

End: 3328824

Strand: Direct

Name: yagI [C]

Synonym: BRADO3131

Alternate gene names: 146340116

Gene position: 3327841-3328824 (Clockwise)

Preceding gene: 146340113

Following gene: 146340117

Centisome position: 44.63

GC content: 65.75

Gene sequence:

>984_bases
ATGGGACGACGGTCTGAGCGATTGAGCAGGGTGGGCATGCTGCCGGGGGATCTCGCTGGCGAGGGCGAGGTCATTCAGGT
GGTGTCGCGAGCGTTCGACGTGCTTCGCTGCTTCGAGGGGCACGATTCGCGGCTCGGCAATCTCGAAATTTCCAACCGCT
GCGGGCTGCCGCGGTCGACCGTGTCGCGGCTGACGCACACGCTGACGCGGATGGGACAACTGGTCTATCTGCCACGCGAT
CAGAAGTATCGCATCGGTCCGAGCGCAGTCGCGATGAGCACCTCGATGACCAGGGGCTTGCAGCTGCGCAACCTGATCCG
GCAGCGCCTGCAGGACGTCGCGGAGCAGCTGCCTGGCACGGTCGGCTTCGTCATTCCGGATCAGTTTCATCTGGTCTATC
TGGAGTTCGGCCGCGCCGCGAACGCGCTCGGCCTGCACGAGACCACCGGCAGCCGCATCTCGATGGCGTCGACGGCGGCG
GGGCACGCTTATGTCGCCGCGCTGGAGCCGGAGGTCGGCGATGCGCTGCTCGCCGAGATGGAGCGCGAGATGCCGGATGC
GGCGAATCTGTTGCGGCCGCGGCTGGAGCACAACAGGCAGTTCCTGAAGGAGCATGGCTACGTCGTGGCCTGCGGCCTGT
GGAGCCCGCATATCAACGGCCTCGCGCTGCCGGTGTGGTCGCCGCAGTACCAGACCAATGTCGTGCTCACCATCGGGCTG
TTGTCGGCGATGTATGACGAGCAGCGTCTGCACGACGAGGTGGCGCAGCCGATGCGCGAGCTCGGCCGCAACATTTCTGC
CCTGTTGCAGGGCGCGGAAGCCGACGTCTTCAACAGCCGGATGGAGAGAAAGCCGCTGCAGGTGACGACGAAGACCAATC
ATAAGAAGACCATCACCGGGGCAGGGGGAACGAATGAGTTGGCAGCCGGAGCTCGAGGAATTGGCCCGGCGCGAGGCCTT
CGCGCGGGAGATGGGCGGGCCTGA

Upstream 100 bases:

>100_bases
GGTTTTAGAAACGCTCTTGTGTTGTGGGAGAAAAAGGCCTGGGCTAGCTTGTTCTGTAAGCGGAATTTAATTCCGCATCA
TGGAATTGAGTGGAACGCGC

Downstream 100 bases:

>100_bases
CAAGGTCAAGCGTCAGCACGACCAGGGCCGCCTCACCGTCCGCGAGCGGATCGACGGCGTCGTCGATCCCGGCAGCTTCC
ACGAGATCGGCGCCGTCGCC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Protein IclR; IclR Family Transcriptional Regulator Family; IclR Family Regulatory Protein; Transcriptional Regulator Family Protein; Regulatory Proteins IclR; Transcriptional Regulator Iclr Family; IclR Helix-Turn-Helix Domain Family; IclR Helix-Turn-Helix Domain-Containing; Transcriptional Regulator IclR Family Protein; Transcriptional Regulator HTH IclR; Transcription Regulator Protein; AsnC Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR IclR Family; Transciptional Regulator IclR Family

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGRRSERLSRVGMLPGDLAGEGEVIQVVSRAFDVLRCFEGHDSRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRD
QKYRIGPSAVAMSTSMTRGLQLRNLIRQRLQDVAEQLPGTVGFVIPDQFHLVYLEFGRAANALGLHETTGSRISMASTAA
GHAYVAALEPEVGDALLAEMEREMPDAANLLRPRLEHNRQFLKEHGYVVACGLWSPHINGLALPVWSPQYQTNVVLTIGL
LSAMYDEQRLHDEVAQPMRELGRNISALLQGAEADVFNSRMERKPLQVTTKTNHKKTITGAGGTNELAAGARGIGPARGL
RAGDGRA

Sequences:

>Translated_327_residues
MGRRSERLSRVGMLPGDLAGEGEVIQVVSRAFDVLRCFEGHDSRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRD
QKYRIGPSAVAMSTSMTRGLQLRNLIRQRLQDVAEQLPGTVGFVIPDQFHLVYLEFGRAANALGLHETTGSRISMASTAA
GHAYVAALEPEVGDALLAEMEREMPDAANLLRPRLEHNRQFLKEHGYVVACGLWSPHINGLALPVWSPQYQTNVVLTIGL
LSAMYDEQRLHDEVAQPMRELGRNISALLQGAEADVFNSRMERKPLQVTTKTNHKKTITGAGGTNELAAGARGIGPARGL
RAGDGRA
>Mature_326_residues
GRRSERLSRVGMLPGDLAGEGEVIQVVSRAFDVLRCFEGHDSRLGNLEISNRCGLPRSTVSRLTHTLTRMGQLVYLPRDQ
KYRIGPSAVAMSTSMTRGLQLRNLIRQRLQDVAEQLPGTVGFVIPDQFHLVYLEFGRAANALGLHETTGSRISMASTAAG
HAYVAALEPEVGDALLAEMEREMPDAANLLRPRLEHNRQFLKEHGYVVACGLWSPHINGLALPVWSPQYQTNVVLTIGLL
SAMYDEQRLHDEVAQPMRELGRNISALLQGAEADVFNSRMERKPLQVTTKTNHKKTITGAGGTNELAAGARGIGPARGLR
AGDGRA

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35792; Mature: 35660

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRSERLSRVGMLPGDLAGEGEVIQVVSRAFDVLRCFEGHDSRLGNLEISNRCGLPRST
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
VSRLTHTLTRMGQLVYLPRDQKYRIGPSAVAMSTSMTRGLQLRNLIRQRLQDVAEQLPGT
HHHHHHHHHHCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VGFVIPDQFHLVYLEFGRAANALGLHETTGSRISMASTAAGHAYVAALEPEVGDALLAEM
EEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEECCCHHHHHHHHH
EREMPDAANLLRPRLEHNRQFLKEHGYVVACGLWSPHINGLALPVWSPQYQTNVVLTIGL
HHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEHHHH
LSAMYDEQRLHDEVAQPMRELGRNISALLQGAEADVFNSRMERKPLQVTTKTNHKKTITG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCEEEEC
AGGTNELAAGARGIGPARGLRAGDGRA
CCCCHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRRSERLSRVGMLPGDLAGEGEVIQVVSRAFDVLRCFEGHDSRLGNLEISNRCGLPRST
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
VSRLTHTLTRMGQLVYLPRDQKYRIGPSAVAMSTSMTRGLQLRNLIRQRLQDVAEQLPGT
HHHHHHHHHHCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VGFVIPDQFHLVYLEFGRAANALGLHETTGSRISMASTAAGHAYVAALEPEVGDALLAEM
EEEEECCCEEEEEEEECCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEECCCHHHHHHHHH
EREMPDAANLLRPRLEHNRQFLKEHGYVVACGLWSPHINGLALPVWSPQYQTNVVLTIGL
HHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEHHHH
LSAMYDEQRLHDEVAQPMRELGRNISALLQGAEADVFNSRMERKPLQVTTKTNHKKTITG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCEEEEC
AGGTNELAAGARGIGPARGLRAGDGRA
CCCCHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA