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The map label for this gene is ycjP [H]

Identifier: 146340099

GI number: 146340099

Start: 3305520

End: 3306437

Strand: Direct

Name: ycjP [H]

Synonym: BRADO3108

Alternate gene names: 146340099

Gene position: 3305520-3306437 (Clockwise)

Preceding gene: 146340098

Following gene: 146340100

Centisome position: 44.33

GC content: 61.98

Gene sequence:

>918_bases
CTGCAATCCAAGACCCCATCGAACGCCACCGCGACCGCGGCCAAGCTCGCCGCCGGCGACGACTCGGAGGGCATGAGCTA
TCTCGAGTCGCTGCCGCGACGCCTGATCACGCTGTATCTGCCGCTCGGGATCATCCTCCTGGTGCTGCTGTTCCCGTTCT
ACTGGATGGGCCTGACGTCGATCAAACCCGACGAGCAGCTGATCGACATGGAGAAGTACAACCCGTTCTGGGTGGTGCAT
CCGACCTTCAAGCACATCTCGAAGCTGTTGTTCGAGACGCAATATCCGCGCTGGCTGTGGAACACGATGTATGTCGCGGT
CGGCGCCACCACGCTGTCGATCTTCGCCTCCGTGCTGGCCGCCTATGCCATCGTGCGGCTGCGCTTCAAGGGCGCCGACA
CCGTGGGCGTGCTGATCTTCTTCGCCTATCTCGTGCCGCCGTCGATCCTGTTCATCCCGCTGGCCTCGGTGATCCAGGCC
TACGGCCTGTTCGACTCGCCGCTGTCCCTGATCCTGGTCTATCCGACACTGCTCATCCCGTTCTCGACCTGGCTGCTGAT
GGGCTACTTCAAGACCATCCCGTTCGAGCTCGAGGAGTGCGCCCTGATCGACGGCGCCAGCCGCTGGCAGATCCTGGTCA
AGATCGTTGTGCCCTTGGCGGTGCCAGGCCTGATCTCGGCCTTCATCTTTTCGTTCACGCTGTGCTGGAACGAGTTCATC
TACGCGCTGACCTTCCTGCAGTCGACGCCGAACAAGACGGTGCCGGTCGCGATCGTCAACGAGTTCGTCGATGGCGACAT
CTACAAATGGGGATCGCTGATGGCCGGCGCCCTGGTCGGCTCGCTGCCCCTCGTGATCCTTTACGCCTTCTTCGTCGAGC
ATTATGTGTCGGCCATGACCGGCGCGGTGAAGGAGTAG

Upstream 100 bases:

>100_bases
CCATGATTCCATTCCTGATGGCGGCGATCGCGATCTCCTGGTTCGGCATGCAACGGCGCAAATGGCAGCAAGGATCCGAC
CAATGACCGACACCGCCGCG

Downstream 100 bases:

>100_bases
GGCGGGCTCGTCGAGCTCTCGTAGGGTGGGCAAAGCGAAGCGTGCCCACCGTCTTCCGGCATCGCCAAATGCTGCGGTGG
GCACGGCGCTACGCGCCTTT

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQSKTPSNATATAAKLAAGDDSEGMSYLESLPRRLITLYLPLGIILLVLLFPFYWMGLTSIKPDEQLIDMEKYNPFWVVH
PTFKHISKLLFETQYPRWLWNTMYVAVGATTLSIFASVLAAYAIVRLRFKGADTVGVLIFFAYLVPPSILFIPLASVIQA
YGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILVKIVVPLAVPGLISAFIFSFTLCWNEFI
YALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE

Sequences:

>Translated_305_residues
MQSKTPSNATATAAKLAAGDDSEGMSYLESLPRRLITLYLPLGIILLVLLFPFYWMGLTSIKPDEQLIDMEKYNPFWVVH
PTFKHISKLLFETQYPRWLWNTMYVAVGATTLSIFASVLAAYAIVRLRFKGADTVGVLIFFAYLVPPSILFIPLASVIQA
YGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILVKIVVPLAVPGLISAFIFSFTLCWNEFI
YALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE
>Mature_305_residues
MQSKTPSNATATAAKLAAGDDSEGMSYLESLPRRLITLYLPLGIILLVLLFPFYWMGLTSIKPDEQLIDMEKYNPFWVVH
PTFKHISKLLFETQYPRWLWNTMYVAVGATTLSIFASVLAAYAIVRLRFKGADTVGVLIFFAYLVPPSILFIPLASVIQA
YGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILVKIVVPLAVPGLISAFIFSFTLCWNEFI
YALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=36.2007168458781, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1790464, Length=222, Percent_Identity=32.8828828828829, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1789860, Length=209, Percent_Identity=28.7081339712919, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34072; Mature: 34072

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKTPSNATATAAKLAAGDDSEGMSYLESLPRRLITLYLPLGIILLVLLFPFYWMGLTS
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKPDEQLIDMEKYNPFWVVHPTFKHISKLLFETQYPRWLWNTMYVAVGATTLSIFASVLA
CCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYAIVRLRFKGADTVGVLIFFAYLVPPSILFIPLASVIQAYGLFDSPLSLILVYPTLLIP
HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FSTWLLMGYFKTIPFELEECALIDGASRWQILVKIVVPLAVPGLISAFIFSFTLCWNEFI
HHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMT
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVKE
HHCCC
>Mature Secondary Structure
MQSKTPSNATATAAKLAAGDDSEGMSYLESLPRRLITLYLPLGIILLVLLFPFYWMGLTS
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKPDEQLIDMEKYNPFWVVHPTFKHISKLLFETQYPRWLWNTMYVAVGATTLSIFASVLA
CCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYAIVRLRFKGADTVGVLIFFAYLVPPSILFIPLASVIQAYGLFDSPLSLILVYPTLLIP
HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FSTWLLMGYFKTIPFELEECALIDGASRWQILVKIVVPLAVPGLISAFIFSFTLCWNEFI
HHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMT
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVKE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]