Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is ssuA [C]
Identifier: 146340087
GI number: 146340087
Start: 3291600
End: 3292655
Strand: Direct
Name: ssuA [C]
Synonym: BRADO3096
Alternate gene names: 146340087
Gene position: 3291600-3292655 (Clockwise)
Preceding gene: 146340086
Following gene: 146340088
Centisome position: 44.14
GC content: 63.73
Gene sequence:
>1056_bases ATGTGCGATCGTGACGGAACCTTCTATCGCAGCTTCTCTCGCCGCAACTTCCTCAAGTCCACGGTGGCCGCGACGGCCGC CACCGTCGCCGTTCCCGCCCATCTCGCCGCTTTGCTGGCGCCGACGCCGGCGCATGCCGGGACTGTCATCAAGGCGACCC ATGGCTCTGGCTTCTGCAACATGGGCATCTTCCTCGCCAAGGAGCGCAACCTGACGGTGGCCGACGGTGTCGAGCTCGAA TTCGTGGTGACGCCGTCGAACACCGAGATCACCACGATGTTCGGCGCCGGTCTCGTCGACATCTCCATGATCCCGTATTC CAACTTCATGACGCTGTACGACGCCGGCGCGCCGGTGAAGATCGTGGCGGGCGGCGGAGTGCAGGGCTGCATCATCGTCG CGAAGGAAGGCATCACGTCCGCCGCCGACCTCAAGGGCAAGACGTTCGGAACGTTCCAGGCCGATACGCTCGAGGTGCTG CCCTACGACTACCTGAAGAAGGCCGGGCTATCGTTCAAGGATGTCGACATCAAATATCTCGACACCTCGCCGGAGCTCGC TCAGGCCTTCATGGCCGGCGCGCTCGACGCGATCTGCCACATCGAGCCTTATGCGACGCAATGTGTGCAGCAGCGCAAGG GCGCGACCGTGTTGTCCGATGGCACCGACCTCTACGGCAAGGGCTATTCCGATTGCGTGCTGGCGGCGCGCGTGCCGCTG ATCGAGAAGAACCCGGCGGCGGTGAAGGCGGTGATCAAGGCGTTGATGGTGGCGCAGAGCCAGGCCGAGGCCGACAAGGC CGCGGCGCTGAAGGACACCGTCGGCAAGTACTACAAGACCTCGATGGAGGCGGCGATCGATGCGTCATCGAAGCAGCCGA TCGTGGTCGACCAGCGCAGCCAGACCCAGTTCATCATCGACCGCGGCGTCTCGATGAAGGAGCTCGGCTACGTCAAGAAG CTGCCCGACCAGGGCGCCTTCGACTGGTCGCTGCTGGAGGCGGTGATCGCCGACAACAAGGCCCTCTATGACGGGCTGAA ACTGAAATCGGCGTGA
Upstream 100 bases:
>100_bases TGGGGTCGGTGGGACGATGCAGGTCGCGTCCACCGTAGGTGGAGCCTTACGGCTCATCGCCAACACGGGGTCCATCCCGT CGTCATGGATGGAGACTCGC
Downstream 100 bases:
>100_bases GATCCCGTAGCCCGGATGAGTGAAGCGACATCCGGGGTCTCACGAGGAGCGTGTGTGAACCCGGATGTCGCTCCGCTCAT CCGGGCTACGCGCTCTCTCA
Product: putative ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MCDRDGTFYRSFSRRNFLKSTVAATAATVAVPAHLAALLAPTPAHAGTVIKATHGSGFCNMGIFLAKERNLTVADGVELE FVVTPSNTEITTMFGAGLVDISMIPYSNFMTLYDAGAPVKIVAGGGVQGCIIVAKEGITSAADLKGKTFGTFQADTLEVL PYDYLKKAGLSFKDVDIKYLDTSPELAQAFMAGALDAICHIEPYATQCVQQRKGATVLSDGTDLYGKGYSDCVLAARVPL IEKNPAAVKAVIKALMVAQSQAEADKAAALKDTVGKYYKTSMEAAIDASSKQPIVVDQRSQTQFIIDRGVSMKELGYVKK LPDQGAFDWSLLEAVIADNKALYDGLKLKSA
Sequences:
>Translated_351_residues MCDRDGTFYRSFSRRNFLKSTVAATAATVAVPAHLAALLAPTPAHAGTVIKATHGSGFCNMGIFLAKERNLTVADGVELE FVVTPSNTEITTMFGAGLVDISMIPYSNFMTLYDAGAPVKIVAGGGVQGCIIVAKEGITSAADLKGKTFGTFQADTLEVL PYDYLKKAGLSFKDVDIKYLDTSPELAQAFMAGALDAICHIEPYATQCVQQRKGATVLSDGTDLYGKGYSDCVLAARVPL IEKNPAAVKAVIKALMVAQSQAEADKAAALKDTVGKYYKTSMEAAIDASSKQPIVVDQRSQTQFIIDRGVSMKELGYVKK LPDQGAFDWSLLEAVIADNKALYDGLKLKSA >Mature_351_residues MCDRDGTFYRSFSRRNFLKSTVAATAATVAVPAHLAALLAPTPAHAGTVIKATHGSGFCNMGIFLAKERNLTVADGVELE FVVTPSNTEITTMFGAGLVDISMIPYSNFMTLYDAGAPVKIVAGGGVQGCIIVAKEGITSAADLKGKTFGTFQADTLEVL PYDYLKKAGLSFKDVDIKYLDTSPELAQAFMAGALDAICHIEPYATQCVQQRKGATVLSDGTDLYGKGYSDCVLAARVPL IEKNPAAVKAVIKALMVAQSQAEADKAAALKDTVGKYYKTSMEAAIDASSKQPIVVDQRSQTQFIIDRGVSMKELGYVKK LPDQGAFDWSLLEAVIADNKALYDGLKLKSA
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37351; Mature: 37351
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDRDGTFYRSFSRRNFLKSTVAATAATVAVPAHLAALLAPTPAHAGTVIKATHGSGFCN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE MGIFLAKERNLTVADGVELEFVVTPSNTEITTMFGAGLVDISMIPYSNFMTLYDAGAPVK CCEEEEECCCEEEECCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEE IVAGGGVQGCIIVAKEGITSAADLKGKTFGTFQADTLEVLPYDYLKKAGLSFKDVDIKYL EEECCCCCEEEEEEECCCCCHHHCCCCEEECCCCCEEEECCHHHHHHCCCCEEECEEEEE DTSPELAQAFMAGALDAICHIEPYATQCVQQRKGATVLSDGTDLYGKGYSDCVLAARVPL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHCCCC IEKNPAAVKAVIKALMVAQSQAEADKAAALKDTVGKYYKTSMEAAIDASSKQPIVVDQRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC QTQFIIDRGVSMKELGYVKKLPDQGAFDWSLLEAVIADNKALYDGLKLKSA CCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCEEECCC >Mature Secondary Structure MCDRDGTFYRSFSRRNFLKSTVAATAATVAVPAHLAALLAPTPAHAGTVIKATHGSGFCN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE MGIFLAKERNLTVADGVELEFVVTPSNTEITTMFGAGLVDISMIPYSNFMTLYDAGAPVK CCEEEEECCCEEEECCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEE IVAGGGVQGCIIVAKEGITSAADLKGKTFGTFQADTLEVLPYDYLKKAGLSFKDVDIKYL EEECCCCCEEEEEEECCCCCHHHCCCCEEECCCCCEEEECCHHHHHHCCCCEEECEEEEE DTSPELAQAFMAGALDAICHIEPYATQCVQQRKGATVLSDGTDLYGKGYSDCVLAARVPL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHCCCC IEKNPAAVKAVIKALMVAQSQAEADKAAALKDTVGKYYKTSMEAAIDASSKQPIVVDQRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC QTQFIIDRGVSMKELGYVKKLPDQGAFDWSLLEAVIADNKALYDGLKLKSA CCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA