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The map label for this gene is yliB [C]

Identifier: 146340013

GI number: 146340013

Start: 3217073

End: 3218674

Strand: Direct

Name: yliB [C]

Synonym: BRADO3019

Alternate gene names: 146340013

Gene position: 3217073-3218674 (Clockwise)

Preceding gene: 146340012

Following gene: 146340014

Centisome position: 43.14

GC content: 65.23

Gene sequence:

>1602_bases
ATGGATCGCAGAACGGTATTGAAGGGATTGGCGGGCGCGGGTGGTCTGGCACTGACGGGCTTCGCTGCACCCGCGATCGC
GCAAGGCGCAAACGCGCGCACCCTGCGCTTCGTGCCGCAGGCCAATCTCGCCAATTTCGATCCGATCTGGGGCACGCAAT
ATGTCGTGCGCAACGCGGCGGCGATGGTGTGGGACACGCTGTACGGCATCGACGACAAGTTCGTGCCGCAGCGCCAGATG
GTGGAATCCGAAGAGGTCTCCTCCGACGGTTTGACCTGGACCTTCAAGCTGCGTCCGGGCCTTAAATTCCATGACGGCGA
GCCGGTGCTCGCCAAGGACGTCGTCGCCAGCCTGACGCGCTGGTCGGCGCGCGATCCGATGGGCCTGATGCTCAAAGCCA
TCCAGAACGAACTTACCCCGGTCGACGACAAGACCTTCAAATGGGTGCTGAAGCAGCCCTATCCGAAGATGCTGTTCGCG
CTCGGCAAGGGCAACGCGCCCTGCGCCTTCGTGATGCCCGAGCGCATCGCGCAGACCGATCCGTTCAAGCAGATGTCGGA
ATATGTCGGCTCCGGCCCGTTCAAATTCGCCAAGGGCGAATGGGTGCCGGGCGCCAAGGCGGTGTTCGAGAAGTTCGCCG
ACTACGTGCCGCGCGACGAGAAGCCGGTGTGGCTCGCGGGCGGCAAGAAGGTGCTGGTCGACCGCGTCGAATGGGTGATC
ATGCCGGATCCCGCGACGGCCGCGGCCGCGCTGCAGAACGGCGAGGTCGACTGGTGGGAGAACCCGATCACCGACCTGGT
GCCGGTGTTGAAGGGCAACAAGAACATCGGCGTCGACATCGGCGATCCGCTCGGCAATGTCGGCTCGTTCCGCATGAACC
ACCTGCATGCGCCTTTCAACAACGTGAAGGCGCGCCAGGCCATCCTGATGGCGCTGAGCCAGGAAGACTACATGCGCGCG
CTGGTCGGCGACGAGAACGCGCTGTGGAAGCCACTGCCGGGCTTCTTCACCCCGGACACGCCGCTCTACACCGAGGCCGG
TGGCGAGATCCTGAAGGGCAAGCGCGACTTCGCCGCGGCGAAGAAGCTGCTGGAAGAGGCCGGCTACAAGGGCGAGCCGA
TCACCTGCGTCGTGGCGCAGGACCAGCCGATCACCAAGGCGTTCGGCGACGTCACCGCGGATCTCCTGAAAAAGCTCGGC
ATGACCGTCGATTTCGTCGCCACCGATTGGGGCACCGTCGGCGCCCGCCGCGCGCAGAAGACGCCGCCGAGCCAAGGCGG
CTGGCACATGTTCCACACTTGGCATGCCGGCGCCGACTGCATCAACCCGGCCGCCTACACCGCGCTGCGCGCCAATGGCG
ACAAGGCCTGGTTCGGCTGGCCGACCAGTGAGAAGGTCGAGACCGAGATCACCAACTGGTTCAACGCCAAGTCGCTCGAC
GAGGAGAAGACGGTTGCGGCCCGCATCAACAAGGCGGCGCTGGAGGACGTGGTGTTCGCGCCGACCGGCTTCTTCCTCGG
CTACACGGCGTGGCGCAAGAACGTCTCCGGCGTGACCAAGGGGCCGATCCCGCTGTTCTGGGGCGTGTCGAAGACGGCAT
GA

Upstream 100 bases:

>100_bases
TGCCTCATTTGCGTTCAAATGAATGCACGCGGCGTGCATGGCATGGGCCTTGCTTACAATTTCGGCAATTGAACTCAAGC
ATCTTGCATCAGGAGCAACC

Downstream 100 bases:

>100_bases
GGCGCTGACAACTCATGCTCAGCTATGCGCTCCGACGCGTGCTGTCGACCTTGCCCGTGATGGCGATCGTCGCGCTGTTC
GTCTTCAGCCTGCTGTACAT

Product: putative ABC transporter periplasmic-binding protein oligopeptide/dipeptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MDRRTVLKGLAGAGGLALTGFAAPAIAQGANARTLRFVPQANLANFDPIWGTQYVVRNAAAMVWDTLYGIDDKFVPQRQM
VESEEVSSDGLTWTFKLRPGLKFHDGEPVLAKDVVASLTRWSARDPMGLMLKAIQNELTPVDDKTFKWVLKQPYPKMLFA
LGKGNAPCAFVMPERIAQTDPFKQMSEYVGSGPFKFAKGEWVPGAKAVFEKFADYVPRDEKPVWLAGGKKVLVDRVEWVI
MPDPATAAAALQNGEVDWWENPITDLVPVLKGNKNIGVDIGDPLGNVGSFRMNHLHAPFNNVKARQAILMALSQEDYMRA
LVGDENALWKPLPGFFTPDTPLYTEAGGEILKGKRDFAAAKKLLEEAGYKGEPITCVVAQDQPITKAFGDVTADLLKKLG
MTVDFVATDWGTVGARRAQKTPPSQGGWHMFHTWHAGADCINPAAYTALRANGDKAWFGWPTSEKVETEITNWFNAKSLD
EEKTVAARINKAALEDVVFAPTGFFLGYTAWRKNVSGVTKGPIPLFWGVSKTA

Sequences:

>Translated_533_residues
MDRRTVLKGLAGAGGLALTGFAAPAIAQGANARTLRFVPQANLANFDPIWGTQYVVRNAAAMVWDTLYGIDDKFVPQRQM
VESEEVSSDGLTWTFKLRPGLKFHDGEPVLAKDVVASLTRWSARDPMGLMLKAIQNELTPVDDKTFKWVLKQPYPKMLFA
LGKGNAPCAFVMPERIAQTDPFKQMSEYVGSGPFKFAKGEWVPGAKAVFEKFADYVPRDEKPVWLAGGKKVLVDRVEWVI
MPDPATAAAALQNGEVDWWENPITDLVPVLKGNKNIGVDIGDPLGNVGSFRMNHLHAPFNNVKARQAILMALSQEDYMRA
LVGDENALWKPLPGFFTPDTPLYTEAGGEILKGKRDFAAAKKLLEEAGYKGEPITCVVAQDQPITKAFGDVTADLLKKLG
MTVDFVATDWGTVGARRAQKTPPSQGGWHMFHTWHAGADCINPAAYTALRANGDKAWFGWPTSEKVETEITNWFNAKSLD
EEKTVAARINKAALEDVVFAPTGFFLGYTAWRKNVSGVTKGPIPLFWGVSKTA
>Mature_533_residues
MDRRTVLKGLAGAGGLALTGFAAPAIAQGANARTLRFVPQANLANFDPIWGTQYVVRNAAAMVWDTLYGIDDKFVPQRQM
VESEEVSSDGLTWTFKLRPGLKFHDGEPVLAKDVVASLTRWSARDPMGLMLKAIQNELTPVDDKTFKWVLKQPYPKMLFA
LGKGNAPCAFVMPERIAQTDPFKQMSEYVGSGPFKFAKGEWVPGAKAVFEKFADYVPRDEKPVWLAGGKKVLVDRVEWVI
MPDPATAAAALQNGEVDWWENPITDLVPVLKGNKNIGVDIGDPLGNVGSFRMNHLHAPFNNVKARQAILMALSQEDYMRA
LVGDENALWKPLPGFFTPDTPLYTEAGGEILKGKRDFAAAKKLLEEAGYKGEPITCVVAQDQPITKAFGDVTADLLKKLG
MTVDFVATDWGTVGARRAQKTPPSQGGWHMFHTWHAGADCINPAAYTALRANGDKAWFGWPTSEKVETEITNWFNAKSLD
EEKTVAARINKAALEDVVFAPTGFFLGYTAWRKNVSGVTKGPIPLFWGVSKTA

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=438, Percent_Identity=26.9406392694064, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1789966, Length=447, Percent_Identity=25.503355704698, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58508; Mature: 58508

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRTVLKGLAGAGGLALTGFAAPAIAQGANARTLRFVPQANLANFDPIWGTQYVVRNAA
CCHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
AMVWDTLYGIDDKFVPQRQMVESEEVSSDGLTWTFKLRPGLKFHDGEPVLAKDVVASLTR
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHH
WSARDPMGLMLKAIQNELTPVDDKTFKWVLKQPYPKMLFALGKGNAPCAFVMPERIAQTD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHEECCCCCCEEEECHHHHHCCC
PFKQMSEYVGSGPFKFAKGEWVPGAKAVFEKFADYVPRDEKPVWLAGGKKVLVDRVEWVI
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECEEEEE
MPDPATAAAALQNGEVDWWENPITDLVPVLKGNKNIGVDIGDPLGNVGSFRMNHLHAPFN
ECCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHCCCCHH
NVKARQAILMALSQEDYMRALVGDENALWKPLPGFFTPDTPLYTEAGGEILKGKRDFAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCHHHHHH
KKLLEEAGYKGEPITCVVAQDQPITKAFGDVTADLLKKLGMTVDFVATDWGTVGARRAQK
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHCCC
TPPSQGGWHMFHTWHAGADCINPAAYTALRANGDKAWFGWPTSEKVETEITNWFNAKSLD
CCCCCCCEEEEEEECCCCCCCCHHHHHEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCC
EEKTVAARINKAALEDVVFAPTGFFLGYTAWRKNVSGVTKGPIPLFWGVSKTA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MDRRTVLKGLAGAGGLALTGFAAPAIAQGANARTLRFVPQANLANFDPIWGTQYVVRNAA
CCHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
AMVWDTLYGIDDKFVPQRQMVESEEVSSDGLTWTFKLRPGLKFHDGEPVLAKDVVASLTR
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHH
WSARDPMGLMLKAIQNELTPVDDKTFKWVLKQPYPKMLFALGKGNAPCAFVMPERIAQTD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHEECCCCCCEEEECHHHHHCCC
PFKQMSEYVGSGPFKFAKGEWVPGAKAVFEKFADYVPRDEKPVWLAGGKKVLVDRVEWVI
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECEEEEE
MPDPATAAAALQNGEVDWWENPITDLVPVLKGNKNIGVDIGDPLGNVGSFRMNHLHAPFN
ECCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHCCCCHH
NVKARQAILMALSQEDYMRALVGDENALWKPLPGFFTPDTPLYTEAGGEILKGKRDFAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCHHHHHH
KKLLEEAGYKGEPITCVVAQDQPITKAFGDVTADLLKKLGMTVDFVATDWGTVGARRAQK
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHCCC
TPPSQGGWHMFHTWHAGADCINPAAYTALRANGDKAWFGWPTSEKVETEITNWFNAKSLD
CCCCCCCEEEEEEECCCCCCCCHHHHHEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCC
EEKTVAARINKAALEDVVFAPTGFFLGYTAWRKNVSGVTKGPIPLFWGVSKTA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]