| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340012
Identifier: 146340012
GI number: 146340012
Start: 3215753
End: 3216709
Strand: Direct
Name: 146340012
Synonym: BRADO3018
Alternate gene names: NA
Gene position: 3215753-3216709 (Clockwise)
Preceding gene: 146340011
Following gene: 146340013
Centisome position: 43.13
GC content: 65.1
Gene sequence:
>957_bases ATGCCGCGCTTCGTCAACGTCGCCATCGGCCAGCTCGGCCCCATCGCCAGGAGCGAGCCGCGCAGCGTGGTCGTCGCGCG GCTGATCGCCCTGATGCGTCAGGCGCACGCCAACGGCTGCGACCTCATCGTCTATCCCGAGCTCGCGCTGACGACCTTCT TCCCGCGCTGGTACATGGCCGATCAGGCCGAGATCGATACGTACTTCGAGCGCGAGATGCCCGGGCCGGAGACGCAGGCG CTCTTCGCGCTCACGAAGGAGCTGCGGATCGGCTTCTGCCTGGGCTACGCCGAGCTGACGGTCGAAGATGGCGTCGTGCA CCGCTACAACACCGCCATCCTCGTCGACAAGGACGCGCGCATCGTCTCGAAATACCGCAAGGTGCATCTGCCGGGACATG CCGAGCACGAACCGTGGCGCAAGTTCCAGCATCTGGAAAAGCGTTACTTCGAGCCGGGCAGGGGTTTCGGCGTGGCCGAT GCCTTCGGCGGCGTCATCGGCATGGCGATCTGCAACGACCGGCGCTGGCCCGAGACCTATCGCGTGATGGGCCTGCAAGG TGTGGAGATGGTGCTGATCGGCTACAACACGCCGGTGCACAATCCGCCTGCGCCGGAGCACGATGATCTCTCGCTGTTCC ACAACCGCCTCGTGATGCAGTCCGGTGCCTATCAGAACGGCACCTGGGTGATCGGCGTGGCGAAGGGCGGCATCGAGGAG GGCGTCGATCATATCGCCGGCAGCTGCATCATCGCGCCCTCAGGCGAAATCGTGGCGGCCTGCGCTACCAAGGGCGACGA GATCGCGCTGGCCCGCTGCGATCTCGACCTGTGCAAGTCGTACAAGCAGACGATCTTCAATTTCGACATCCATCGCCAGC CCCGGGCTTACGGCATGATCGTCGAGCGCAAGGGCGAGCGGCTGATGGCGGACGGTTCGCCGGTGCGGAAATCGTGA
Upstream 100 bases:
>100_bases TATGCGCCGGGCTTGCGCGAGTAGAGCCGCGTGGCATGATGACTGCAGGAGCAGCGCACCCCGCGAACCACAAAACAGTT CCGGAAAAAGGAACAGAATC
Downstream 100 bases:
>100_bases CGCGTAGGGTGGGCAAAGGCGCTGCCGTGCTGTTTCCTGATCCAAGATCGCAATGGCGCCGTGCCCATCGTCTCGCTGCG GACTGCGCGGCGCGATGGTG
Product: N-carbamoyl-D-amino acid hydrolase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPRFVNVAIGQLGPIARSEPRSVVVARLIALMRQAHANGCDLIVYPELALTTFFPRWYMADQAEIDTYFEREMPGPETQA LFALTKELRIGFCLGYAELTVEDGVVHRYNTAILVDKDARIVSKYRKVHLPGHAEHEPWRKFQHLEKRYFEPGRGFGVAD AFGGVIGMAICNDRRWPETYRVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNGTWVIGVAKGGIEE GVDHIAGSCIIAPSGEIVAACATKGDEIALARCDLDLCKSYKQTIFNFDIHRQPRAYGMIVERKGERLMADGSPVRKS
Sequences:
>Translated_318_residues MPRFVNVAIGQLGPIARSEPRSVVVARLIALMRQAHANGCDLIVYPELALTTFFPRWYMADQAEIDTYFEREMPGPETQA LFALTKELRIGFCLGYAELTVEDGVVHRYNTAILVDKDARIVSKYRKVHLPGHAEHEPWRKFQHLEKRYFEPGRGFGVAD AFGGVIGMAICNDRRWPETYRVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNGTWVIGVAKGGIEE GVDHIAGSCIIAPSGEIVAACATKGDEIALARCDLDLCKSYKQTIFNFDIHRQPRAYGMIVERKGERLMADGSPVRKS >Mature_317_residues PRFVNVAIGQLGPIARSEPRSVVVARLIALMRQAHANGCDLIVYPELALTTFFPRWYMADQAEIDTYFEREMPGPETQAL FALTKELRIGFCLGYAELTVEDGVVHRYNTAILVDKDARIVSKYRKVHLPGHAEHEPWRKFQHLEKRYFEPGRGFGVADA FGGVIGMAICNDRRWPETYRVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNGTWVIGVAKGGIEEG VDHIAGSCIIAPSGEIVAACATKGDEIALARCDLDLCKSYKQTIFNFDIHRQPRAYGMIVERKGERLMADGSPVRKS
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=294, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 35530; Mature: 35399
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFVNVAIGQLGPIARSEPRSVVVARLIALMRQAHANGCDLIVYPELALTTFFPRWYMA CCCEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCHHHCC DQAEIDTYFEREMPGPETQALFALTKELRIGFCLGYAELTVEDGVVHRYNTAILVDKDAR CCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCEEEEECEEEEEECCHH IVSKYRKVHLPGHAEHEPWRKFQHLEKRYFEPGRGFGVADAFGGVIGMAICNDRRWPETY HHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH RVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNGTWVIGVAKGGIEE HEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHH GVDHIAGSCIIAPSGEIVAACATKGDEIALARCDLDLCKSYKQTIFNFDIHRQPRAYGMI HHHHHCCCEEECCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHEECCCCCCCCCEEEE VERKGERLMADGSPVRKS EECCCCEEECCCCCCCCC >Mature Secondary Structure PRFVNVAIGQLGPIARSEPRSVVVARLIALMRQAHANGCDLIVYPELALTTFFPRWYMA CCEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCHHHCC DQAEIDTYFEREMPGPETQALFALTKELRIGFCLGYAELTVEDGVVHRYNTAILVDKDAR CCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCEEEEECEEEEEECCHH IVSKYRKVHLPGHAEHEPWRKFQHLEKRYFEPGRGFGVADAFGGVIGMAICNDRRWPETY HHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH RVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNGTWVIGVAKGGIEE HEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHH GVDHIAGSCIIAPSGEIVAACATKGDEIALARCDLDLCKSYKQTIFNFDIHRQPRAYGMI HHHHHCCCEEECCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHEECCCCCCCCCEEEE VERKGERLMADGSPVRKS EECCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]