| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339611
Identifier: 146339611
GI number: 146339611
Start: 2791388
End: 2792266
Strand: Direct
Name: 146339611
Synonym: BRADO2603
Alternate gene names: NA
Gene position: 2791388-2792266 (Clockwise)
Preceding gene: 146339610
Following gene: 146339612
Centisome position: 37.44
GC content: 67.46
Gene sequence:
>879_bases GTGATCTACGACATCCGACATGTCACCACCTATGAGTATGAGAGCGCGGTGAGCTTCGCGCGCTGCTCGCTGCGGCTGGA GCCGCTCAGCGGCGACGGTCAGGAGCTGATCTCGCACAGCGTCGACATCCGGCCGCGCCCCTCGGAGCGCACGGCGCGCC GCGACTTCTTCGGGACGCTGACCGAGAGCATCGTGATCGACACCCAGCACCGCCATCTGCGGATCGATTCGCGCTCGCGG GTGAAGCTGTCGCGCAAGCCGCCGGAGCGCGATGCGTCGAGCGCGACCTGGGAGCAGGTGCGCGACGCCGCGTTCGAGGC GACGAGTCTCGGCCCGTCGTCGCCGATCGGCTACGTTTTCGAAAGTGCGCTGGTGCCGGTGCTCAAGCCCGTCACGGACT ACGCGGCGGCGAGCTTTCCGGCCGGCACCGGCATCCTTGCAGGGGGCGCCGACCTGATGCGGCGCATCCGCAAGGAGTTC AGATACGATCCGAAGGCCACGGTGATCTCGACGCCGCTGCGCGAGGTGTTCGATAATCGCCATGGCGTCTGCCAGGATTT CGCGCATGTCATGATCGCCGGCCTGCGCGGCCTCGGTCTGCCCGCGGCCTATGTCAGCGGCTATCTGCGCACGATTCCGC CCGAGGGCCAGCCGCGGCTGCAGGGTGCCGACGCGACGCACGCGTGGGTGTCGCTGTGGTGCGGCGAGGCGCTCGGCTGG ATCGGCTTCGATCCCACCAACGATCTCGTCGTCGGCAATGATCATATCATCCTCGGCATGGGCCGCGACTTCTCCGACGT CTCGCCGGTTGACGGCATCATCGTCGGCTCGCCCAAGCAAAAGCTCGGCGTCGCCGTCGACGTCGTGATGGTCGAGTAG
Upstream 100 bases:
>100_bases CGCTGGAGCAGGACCTGCTCAATCTGTCGGAAGCGATCGGCCAGCACTACTTCCCGCACGGCCCCAATGCGACGCGGCCG GAAAAGCTCACGGGCCTCGC
Downstream 100 bases:
>100_bases GGCGGTTCCCGGAGCGGGAACGAGCGGAACATTTCCACTGCATCTCACTTGACCCGCCCGAGGGGCTTGAACCGGGGGCT GGCTGACCCTTTCGAGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE
Sequences:
>Translated_292_residues MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE >Mature_292_residues MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTLTESIVIDTQHRHLRIDSRSR VKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVFESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEF RYDPKATVISTPLREVFDNRHGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 32017; Mature: 32017
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTL CEEEEEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH TESIVIDTQHRHLRIDSRSRVKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVF HHHEEEECCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH ESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEFRYDPKATVISTPLREVFDNR HHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCC HGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE CCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHCEEEEEEEEC >Mature Secondary Structure MIYDIRHVTTYEYESAVSFARCSLRLEPLSGDGQELISHSVDIRPRPSERTARRDFFGTL CEEEEEEEEEHHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH TESIVIDTQHRHLRIDSRSRVKLSRKPPERDASSATWEQVRDAAFEATSLGPSSPIGYVF HHHEEEECCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH ESALVPVLKPVTDYAAASFPAGTGILAGGADLMRRIRKEFRYDPKATVISTPLREVFDNR HHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCC HGVCQDFAHVMIAGLRGLGLPAAYVSGYLRTIPPEGQPRLQGADATHAWVSLWCGEALGW CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC IGFDPTNDLVVGNDHIILGMGRDFSDVSPVDGIIVGSPKQKLGVAVDVVMVE CCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEECCCHHHHCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]